Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03-
01] 30 sequences; 29,634,442 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq6 86.0 5e-12
>seq6
Length=1902109
Score = 86.0 bits (94), Expect = 5e-12
Identities = 160/231 (69%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
|| || | ||| ||||| |||||||| || || ||||||||| ||||||||||| |
Sbjct 701196 CCACCACGCAGGCGCAGAACCAGATGCAGAGTCGACTCCTTCTGGATGTTGTAATC-GGA 701138
Query 33961 AATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019
|| || || | || |||| ||||| || ||||| ||||| |||||||| ||| ||
Sbjct 701137 AAGCGTACGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGAGG 701078
Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTT---AATGGAACTCACACTATCAGTAGATTC 34076
| | ||| |||||| ||| || ||| | || | || | || | |||||
Sbjct 701077 AATACCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCAATC---GTGTCCGACGATTC 701021
Query 34077 GCATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127
| || | ||| || || || || || || || ||||||||||| |||||
Sbjct 701020 GACCTCTAGCGTGATGGTCTTGCCAGTCAGCGTCTTCACAAAGATCTGCAT 700970
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397062254824060
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |