Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03-
01] 30 sequences; 29,634,442 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq18 132 1e-25
seq26 98.7 2e-15
>seq18
Length=564976
Score = 132 bits (146), Expect = 1e-25
Identities = 171/236 (72%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561
|||||||| || || |||| | || ||||| ||| | ||| ||| | || |||
Sbjct 230417 ATCATCACCGATGCCGTTGTCATTGAGAAGGAGTTCCTGACCGAGGCTCTGCCTTGCGCC 230476
Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621
|| ||||||||||| | || |||||| |||||||| || || || |||||||| |
Sbjct 230477 CTGCTTGGCATGAACGCCGACCTCATGAAGCAGTACATTGAGTTTGTCGCCGACCGTCTG 230536
Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681
| | || ||||| | ||||| || ||| ||||| ||||||||||| ||| ||||||
Sbjct 230537 CTGGTTGCCCTTGGCAACGAGAAGGTCTACCGCTCCACGAACCCCTTTGACTTCATGGAG 230596
Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA 243737
||| ||||| || || || ||||||||||| |||||||| |||| || ||
Sbjct 230597 AACATCTCGCTGGGCGGTAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCA 230652
>seq26
Length=133288
Score = 98.7 bits (108), Expect = 2e-15
Identities = 126/174 (72%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 334181 GGGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCC 334240
|||||| || |||| ||| |||| || || ||||||||||| || ||||||| ||
Sbjct 87901 GGGGAAACCCTCAACCTGCTCGTTGTTGATGGCACGCATCAGAGTCGACTTACCCGAACC 87960
Query 334241 GTTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAG 334300
||| || || |||||||||||||| | ||||||||||| | | || | ||| ||
Sbjct 87961 GTTGGGACCGCACAGACCGTAGCGCTGGCCACGCTTCAGGCGCAGGTGGGTCTGGTTAAG 88020
Query 334301 AAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354
||||| || |||| || || || || || || | ||||||||||||||
Sbjct 88021 CAGAATCTTGGCACCGTAGGCAAGGGAGAAAGTGCAGTTGCACAGATCCTCACC 88074
Score = 93.3 bits (102), Expect = 9e-14
Identities = 206/300 (69%), Gaps = 22/300 (7%)
Strand=Plus/Plus
Query 333637 TGATACCCTCGAGGAACCCGGGCTCGGGGAACTTCCACGTGGTCTTCGTCTCGGTAAGGG 333696
||| |||||| ||||| || ||||||||||| | || | ||| || | ||
Sbjct 87363 TGACACCCTCAAGGAAACCAGGCTCGGGGAAGGTGAACTCGATCTCCGAGGCACCCAGCT 87422
Query 333697 CGTAGTA--ACTCG-CTGATTCGGGACGCTTCTTCACGAACTCGGACAGATTTCCCTTGT 333753
||||||| ||| | | || ||| | |||||| |||||||| | ||| || || ||
Sbjct 87423 CGTAGTACGACTTGGCCGA---GGGGCACTTCTTGACGAACTCAGCCAGGTTACCACGGT 87479
Query 333754 ACTTCTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGTG-CAAACAGCGTCGAGG 333812
| ||| ||||| | | | ||||| |||||||| | | || || || |||||||
Sbjct 87480 AGCGCTTAAGCTTGAAGC---GCTCGTAGTGGATAAT-GTGCTGGCAGACGTTGTCGAGG 87535
Query 333813 AACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAAGG----TTGATCAGGTA 333868
|| || |||||||| || ||||| | |||| || | |||| ||| ||||||
Sbjct 87536 AAACCAGAGTCGTGAGAGACAATGAT---CGAA--GTGC--AAGGAGAGTTGCACAGGTA 87588
Query 333869 TTCAATCAGCCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGCTCGTCAAGAAGTAG 333928
|| ||||||| | ||||| |||| ||||||||||| |||||||| ||||| ||
Sbjct 87589 GTCCTCCAGCCACTTAACGTTCTTCACATCCAGATGGTTGGTGGGCTCGTCCAGAAGCAG 87648
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102879576080500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |