Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03- 01] 30 sequences; 29,634,442 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq19 214 2e-50 seq18 147 3e-30 >seq19 Length=545716 Score = 214 bits (236), Expect = 2e-50 Identities = 1170/1848 (63%), Gaps = 55/1848 (3%) Strand=Plus/Plus Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624 ||||||||||||| ||| |||| | || ||||||||||| ||||||||||| | Sbjct 481107 TGAACTGAATGGGCGCCGCAGCCGCCTGCGTACGCAGGTAGTACATGCCCGTCTTGAGAC 481166 Query 113625 CCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 113684 || |||||||| | | ||||| || | |||| | || || | |||| Sbjct 481167 CCAGCTTCCAGCCCGCAAAGTGCATGCTGGTAATCTTGCCCATCGTAGGGTCCTTCATGT 481226 Query 113685 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCA 113744 | ||| | ||||| || ||||| ||| |||||||| || ||||| | || Sbjct 481227 GAATGTTGAGCGACTGGGACTGGTCGATAAAGGCACCACGATCAGCAGCCATCTG---CA 481283 Query 113745 CATCCTTCATCTTG---ATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGA 113801 || || | || || ||||||||||| |||| || ||| ||||| || |||| Sbjct 481284 CAACCGTACGCTGCGAAATCTCCCACACAGTCTTGTACAGCGCCTTGATATCGTC-GGGA 481342 Query 113802 TATCCACG--ATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCTT 113859 || | | || || ||||| || || | || | ||| | | |||||| | | Sbjct 481343 -ATGCTGGGAATGTTCTGGATAGATCCGTTCTCCGCAATGATGCGGTTCTTCATGTTGTC 481401 Query 113860 TGACCAGAGACCAATCTTTTTGAGATCCTCCACG-AGATGCTTA---TTGACAACAACAA 113915 ||||| ||||| | | ||||| ||| || || | |||||||| | Sbjct 481402 CGACCACAGACCCAGGTCCACCAGATC----ACGCAGCAGCCAAGGGTTGACAACCTGGA 481457 Query 113916 ACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCAT 113975 |||| || || || || | | | || || |||| ||||| |||||||||||||| | Sbjct 481458 ACTCGCCAGCCAGCACACGACGCTGGTAAATGTTGGAAGTGTACGGCTCAAAGCACTCGT 481517 Query 113976 TGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTAC 114035 |||| |||| || || | ||| ||| || ||||| || || | ||||| ||| | Sbjct 481518 TGTTGCCCAGAATCTGCGACGTGCTGGCCGTCGGCATCGGCGCAAGCAGAAGCGAGTTGC 481577 Query 114036 GGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCT 114095 | | ||| || | | | || | |||||||| | ||||||| || | | | | Sbjct 481578 GCACACCGTTCTGCTTGATCTGCTCCTTGAGCGACGCCCAGTCCCAGAGGTCGCTGGGCG 481637 Query 114096 CCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCT 114155 | | |||||| || ||||| ||||| || || || | ||||| |||||| | || Sbjct 481638 TGACATTCCACATGTCGAACTGCAGGATGCCCTGAGAAACGGGCGAACCCTCATACGTAG 481697 Query 114156 CGTATGGGCCCTCAACCTCCGCCAATTCG---GAGCTCGCCTCGAGGGCTGCGTGATACA 114212 ||| | ||||| ||| || | ||| ||| || | ||||| ||||| || | Sbjct 481698 AGTAGGTACCCTCCTCCTTGGCAATTTCCATCGAGGCCGTC---AGGGCAGCGTGGTAGA 481754 Query 114213 TTGTCTCAAAAATGCGAGCATTCA--TTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCG 114270 | || ||||| || ||| || | |||| |||||| | || ||||| | | || Sbjct 481755 TGGTTTCAAAGATCTGAGTGTTGAGCTTGCGA--GCCTCGGCAGACTCAAAAGGCATGCG 481812 Query 114271 GCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCAT 114330 | | || |||| || ||||| || ||||| | ||||| || || || | ||| Sbjct 481813 CAGCGCCAGGAAGGCATCAGCCAGACCCTGAACACCAACACCAATGGGACGGTGACGCAT 481872 Query 114331 ATTAGACTTTCGAGCGGTCTC---CACGGGATAAAAATTCCTATCGATAACCCTATTTAG 114387 || || | | | || ||| |||||| || || || || | | || || Sbjct 481873 GTTG--CTGTTGTG-GGCCTCAGGCACGGGGTAGTGGTTGACGTCAATGATGCGGTTCAG 481929 Query 114388 ATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTC 114447 || |||||||| |||| || || ||||| | | | || | | | | Sbjct 481930 GTTGCGCACAACAACCTTGGTGACCTCGTGCAGCTTCTGGAAGTCGTACTCGTTCTTGTT 481989 Query 114448 TTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTT 114507 | | |||| || || || || | || ||||| || ||||| | |||||| Sbjct 481990 GTAGTCGACAAACGACGGCAGAGCCAGCGAAGCCAGGTTGCACACGGCAACCTCATCAGG 482049 Query 114508 ATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTT 114567 || |||||| ||||| || || |||| || || || ||||| |||| |||||| Sbjct 482050 CGCACAGTACTCAATAATCTCAGTGCACAGGTTGGAGCTGCGGATGGTACCCAGGTTCTT 482109 Query 114568 TTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGT 114627 || || ||| ||| || |||||||| |||||| | || | || ||||| || Sbjct 482110 CTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAGCATGAACGGGTTGCCTGTCTCGGT 482169 Query 114628 TTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCC 114686 |||| || ||||| || | ||| | | || | | || | | | ||| | | || | Sbjct 482170 CTGGGCCTCCAGAATGGCGTACCACAGCTTCTGGGCCTTGATC-GACGCGCGGCCACGGC 482228 Query 114687 CCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCC 114746 |||| | |||||||||| ||| ||||| |||||||| || || | || | || | Sbjct 482229 CCTCTTGCTCGTACTTTTCGTACAGGGCCTCAAACTCCTCGCCGTAGCAATCAGCCAGGC 482288 Query 114747 CTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGA 114806 | || || | ||||| | || | ||| | | | || ||| ||||||||||||| Sbjct 482289 CAGGGCACTCGTTGGGGCACATCAGGGTCCAGTCAGCGTTCTTCTCGACACGCTTCATGA 482348 Query 114807 AGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCT 114866 |||| || || ||||| || || ||| ||||| || |||| | || || | || | Sbjct 482349 AGAGATCGGGAATCCACAGCGCCAGGAAAAGATCGCGGGCGCGAACCTCCTCCTTGCCGT 482408 Query 114867 GATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCG 114926 | || |||| || | || || | | ||||||||||||||| |||||||| | | Sbjct 482409 GGTTCTTGCGCAGGTCAAGGAACTCAAACACATCCGCGTGCCACGGCTCCAGGTAAATGG 482468 Query 114927 CGATTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAA 114980 | | | || | | || ||| |||||| || || | || ||| || | Sbjct 482469 CAAAGGCACC---AGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGGGCAGTGTTGTTGA 482525 Query 114981 ATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TACGAGA 115038 | || || ||||| ||||||||||| | || || ||||| || || |||||| Sbjct 482526 ACACACGCAGCATGGGAATGATACCGTTGGAGGTACCGTTTGTGCCGGCAATGTACGAGC 482585 Query 115039 CTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTG 115098 | | |||| | | |||| | | ||| ||||| || ||| ||| ||||| Sbjct 482586 C--AGTGGCACGAATGCGGTGGACATTGAGACCGATACCACCAGCCATCTTGGAGATCAT 482643 Query 115099 CGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAG 115158 || || | ||||| | |||| || || ||||||||||| |||| | | | || Sbjct 482644 AGCACAAGTCTTGAGAGTATCGTAAATGCCCTCGATCGAGTCTTCCTTCATGTCAACCAG 482703 Query 115159 GAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTG 115218 |||||| |||| || | | || ||||| |||||||| || || || | ||||| Sbjct 482704 GAAGCAAGAGGACAGCTGAGCCTGGGGCGTACCCGCGTTGAAAAGAGTGGGCGAGGCGTG 482763 Query 115219 GATGAACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCT-TC 115275 | ||| | | |||| ||||| | ||| |||| ||| | ||| | ||| || Sbjct 482764 GGTGA--AGAACTTGCTAGACATGAGGTTGTACGTCT-CAATAACACGGTCAACTCTGTC 482820 Query 115276 CCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACC 115335 || ||| |||| | || ||||||| ||||| ||||| || | | | || Sbjct 482821 ACCCCAAATGCCGACAGCAACACGCATAATCATGTGCTGGGGACGCTCGACAATCTTGCC 482880 Query 115336 ATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATA 115383 |||||| || | ||||| ||||| |||||||| ||||| || Sbjct 482881 GTCGAGCTTCAGCAGGTACGAACGCTCCAGGGTCTTGAAGCCAAAGTA 482928 >seq18 Length=564976 Score = 147 bits (162), Expect = 3e-30 Identities = 526/817 (64%), Gaps = 23/817 (3%) Strand=Plus/Minus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 |||||| ||||| ||||||||||||||||| ||||| ||| ||| ||| |||||||| Sbjct 230650 GTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTACCGCCCAGCGAGATGTTCTCCAT 230591 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGCACCC-CAATCTGTTTGAG 125871 || ||||| |||||| | ||| | | | |||| || ||| | || Sbjct 230590 GAAGTCAAAGGGGTTCGTGGAGCGGTAGACCTTCTCGTTGCCAAGGGCAACC------AG 230537 Query 125872 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG 125931 ||||| || | ||| |||||||||||| ||| || | |||||| || | || Sbjct 230536 CAGACGGTCGGCGACAAACTCAATGTACTGCTTCATGAGGTCGGCGTTCATGCCAAGCAG 230477 Query 125932 GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGAT 125991 | || || || || || | |||| |||||||||| | ||||| || | ||| Sbjct 230476 GGCGCAAGGCAGAGCCTCGGTCAGGAACTCCTTCTCAATGACAACGGCATCGGTGATGAT 230417 Query 125992 GGCGTGAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAA 126051 | | || | | | ||| | || || | |||||| |||||| Sbjct 230416 CTCCTCAACAAGCTTCTTGCTAGGGCGGGTGTTCAGGTGCGAGAAGAGCAGGCAGGCAAA 230357 Query 126052 CTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCAT 126111 || ||| |||||||||||||| || || || || || || ||| ||| || ||||| Sbjct 230356 GTCGGTGTGCAGACCCTCGTCACGCGAAATCAGCTCGTTGGAAAAGGTCAGACCGGGCAT 230297 Query 126112 GAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTC 126171 ||||| ||||| || ||||||||| | || | |||||||||||||| ||||| Sbjct 230296 CAGACCACGCTTGCGCAGCCAGAAAATGGAGGCGAAAGCGCCCGAGAAGAAGATACCCTC 230237 Query 126172 CACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC---AAACCA 126228 || || || || | ||||||| ||||||| ||||| ||| || ||| Sbjct 230236 GACGGCGGCAAAGGCCACCAGACGCTGGGCAAAGG---TCGACTCGCGGTCGGAAATCCA 230180 Query 126229 CTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAG 126288 ||| | ||||| | ||||| || || || | ||| | ||| || | || || Sbjct 230179 CTTGAGAGCCCAGTCGGCCTTGCGGCGAATGCAAGGAATGGTGTCGATGGCGTTGAACAG 230120 Query 126289 TTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCC 126348 | | | | || || |||||||| | || ||||| || || || || Sbjct 230119 GTAGCTGCGCTGGGCAGGCTCCTTGATGTAGGTGTCGATGAGCAGCGAGTACGTCTCCGA 230060 Query 126349 GTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTA 126407 ||||| | | ||| || | ||| | ||||||| |||| || ||| ||||| | Sbjct 230059 GTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGGGATCTGGA 230001 Query 126408 CCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAA 126467 ||||| | | ||| | | ||||| ||||| || || || |||| || | Sbjct 230000 CCTCACCCGAGAAACGCTCGACCAAGTTCTCGTTGACAATGCCGTCCGAAGCAGCGAAGA 229941 Query 126468 ACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGT 126524 | ||||||| | | ||||| | || ||| | || ||||| || | |||||||||| Sbjct 229940 AGGCCAGGACGTGCGAGATGAAGTACTTTTCGTCCTTGTTCATGCGGTTGTTCCAGTCGT 229881 Query 126525 CAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 ||||||||| || ||||| | |||||| || ||||| Sbjct 229880 GAAGATCCTTGGACAGATCAATCTCCTCGGCCGTCCA 229844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353375992400