Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03-
01] 30 sequences; 29,634,442 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq19 214 2e-50
seq18 147 3e-30
>seq19
Length=545716
Score = 214 bits (236), Expect = 2e-50
Identities = 1170/1848 (63%), Gaps = 55/1848 (3%)
Strand=Plus/Plus
Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624
||||||||||||| ||| |||| | || ||||||||||| ||||||||||| |
Sbjct 481107 TGAACTGAATGGGCGCCGCAGCCGCCTGCGTACGCAGGTAGTACATGCCCGTCTTGAGAC 481166
Query 113625 CCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 113684
|| |||||||| | | ||||| || | |||| | || || | ||||
Sbjct 481167 CCAGCTTCCAGCCCGCAAAGTGCATGCTGGTAATCTTGCCCATCGTAGGGTCCTTCATGT 481226
Query 113685 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCA 113744
| ||| | ||||| || ||||| ||| |||||||| || ||||| | ||
Sbjct 481227 GAATGTTGAGCGACTGGGACTGGTCGATAAAGGCACCACGATCAGCAGCCATCTG---CA 481283
Query 113745 CATCCTTCATCTTG---ATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGA 113801
|| || | || || ||||||||||| |||| || ||| ||||| || ||||
Sbjct 481284 CAACCGTACGCTGCGAAATCTCCCACACAGTCTTGTACAGCGCCTTGATATCGTC-GGGA 481342
Query 113802 TATCCACG--ATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCTT 113859
|| | | || || ||||| || || | || | ||| | | |||||| | |
Sbjct 481343 -ATGCTGGGAATGTTCTGGATAGATCCGTTCTCCGCAATGATGCGGTTCTTCATGTTGTC 481401
Query 113860 TGACCAGAGACCAATCTTTTTGAGATCCTCCACG-AGATGCTTA---TTGACAACAACAA 113915
||||| ||||| | | ||||| ||| || || | |||||||| |
Sbjct 481402 CGACCACAGACCCAGGTCCACCAGATC----ACGCAGCAGCCAAGGGTTGACAACCTGGA 481457
Query 113916 ACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCAT 113975
|||| || || || || | | | || || |||| ||||| |||||||||||||| |
Sbjct 481458 ACTCGCCAGCCAGCACACGACGCTGGTAAATGTTGGAAGTGTACGGCTCAAAGCACTCGT 481517
Query 113976 TGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTAC 114035
|||| |||| || || | ||| ||| || ||||| || || | ||||| ||| |
Sbjct 481518 TGTTGCCCAGAATCTGCGACGTGCTGGCCGTCGGCATCGGCGCAAGCAGAAGCGAGTTGC 481577
Query 114036 GGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCT 114095
| | ||| || | | | || | |||||||| | ||||||| || | | | |
Sbjct 481578 GCACACCGTTCTGCTTGATCTGCTCCTTGAGCGACGCCCAGTCCCAGAGGTCGCTGGGCG 481637
Query 114096 CCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCT 114155
| | |||||| || ||||| ||||| || || || | ||||| |||||| | ||
Sbjct 481638 TGACATTCCACATGTCGAACTGCAGGATGCCCTGAGAAACGGGCGAACCCTCATACGTAG 481697
Query 114156 CGTATGGGCCCTCAACCTCCGCCAATTCG---GAGCTCGCCTCGAGGGCTGCGTGATACA 114212
||| | ||||| ||| || | ||| ||| || | ||||| ||||| || |
Sbjct 481698 AGTAGGTACCCTCCTCCTTGGCAATTTCCATCGAGGCCGTC---AGGGCAGCGTGGTAGA 481754
Query 114213 TTGTCTCAAAAATGCGAGCATTCA--TTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCG 114270
| || ||||| || ||| || | |||| |||||| | || ||||| | | ||
Sbjct 481755 TGGTTTCAAAGATCTGAGTGTTGAGCTTGCGA--GCCTCGGCAGACTCAAAAGGCATGCG 481812
Query 114271 GCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCAT 114330
| | || |||| || ||||| || ||||| | ||||| || || || | |||
Sbjct 481813 CAGCGCCAGGAAGGCATCAGCCAGACCCTGAACACCAACACCAATGGGACGGTGACGCAT 481872
Query 114331 ATTAGACTTTCGAGCGGTCTC---CACGGGATAAAAATTCCTATCGATAACCCTATTTAG 114387
|| || | | | || ||| |||||| || || || || | | || ||
Sbjct 481873 GTTG--CTGTTGTG-GGCCTCAGGCACGGGGTAGTGGTTGACGTCAATGATGCGGTTCAG 481929
Query 114388 ATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTC 114447
|| |||||||| |||| || || ||||| | | | || | | | |
Sbjct 481930 GTTGCGCACAACAACCTTGGTGACCTCGTGCAGCTTCTGGAAGTCGTACTCGTTCTTGTT 481989
Query 114448 TTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTT 114507
| | |||| || || || || | || ||||| || ||||| | ||||||
Sbjct 481990 GTAGTCGACAAACGACGGCAGAGCCAGCGAAGCCAGGTTGCACACGGCAACCTCATCAGG 482049
Query 114508 ATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTT 114567
|| |||||| ||||| || || |||| || || || ||||| |||| ||||||
Sbjct 482050 CGCACAGTACTCAATAATCTCAGTGCACAGGTTGGAGCTGCGGATGGTACCCAGGTTCTT 482109
Query 114568 TTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGT 114627
|| || ||| ||| || |||||||| |||||| | || | || ||||| ||
Sbjct 482110 CTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAGCATGAACGGGTTGCCTGTCTCGGT 482169
Query 114628 TTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCC 114686
|||| || ||||| || | ||| | | || | | || | | | ||| | | || |
Sbjct 482170 CTGGGCCTCCAGAATGGCGTACCACAGCTTCTGGGCCTTGATC-GACGCGCGGCCACGGC 482228
Query 114687 CCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCC 114746
|||| | |||||||||| ||| ||||| |||||||| || || | || | || |
Sbjct 482229 CCTCTTGCTCGTACTTTTCGTACAGGGCCTCAAACTCCTCGCCGTAGCAATCAGCCAGGC 482288
Query 114747 CTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGA 114806
| || || | ||||| | || | ||| | | | || ||| |||||||||||||
Sbjct 482289 CAGGGCACTCGTTGGGGCACATCAGGGTCCAGTCAGCGTTCTTCTCGACACGCTTCATGA 482348
Query 114807 AGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCT 114866
|||| || || ||||| || || ||| ||||| || |||| | || || | || |
Sbjct 482349 AGAGATCGGGAATCCACAGCGCCAGGAAAAGATCGCGGGCGCGAACCTCCTCCTTGCCGT 482408
Query 114867 GATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCG 114926
| || |||| || | || || | | ||||||||||||||| |||||||| | |
Sbjct 482409 GGTTCTTGCGCAGGTCAAGGAACTCAAACACATCCGCGTGCCACGGCTCCAGGTAAATGG 482468
Query 114927 CGATTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAA 114980
| | | || | | || ||| |||||| || || | || ||| || |
Sbjct 482469 CAAAGGCACC---AGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGGGCAGTGTTGTTGA 482525
Query 114981 ATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TACGAGA 115038
| || || ||||| ||||||||||| | || || ||||| || || ||||||
Sbjct 482526 ACACACGCAGCATGGGAATGATACCGTTGGAGGTACCGTTTGTGCCGGCAATGTACGAGC 482585
Query 115039 CTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTG 115098
| | |||| | | |||| | | ||| ||||| || ||| ||| |||||
Sbjct 482586 C--AGTGGCACGAATGCGGTGGACATTGAGACCGATACCACCAGCCATCTTGGAGATCAT 482643
Query 115099 CGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAG 115158
|| || | ||||| | |||| || || ||||||||||| |||| | | | ||
Sbjct 482644 AGCACAAGTCTTGAGAGTATCGTAAATGCCCTCGATCGAGTCTTCCTTCATGTCAACCAG 482703
Query 115159 GAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTG 115218
|||||| |||| || | | || ||||| |||||||| || || || | |||||
Sbjct 482704 GAAGCAAGAGGACAGCTGAGCCTGGGGCGTACCCGCGTTGAAAAGAGTGGGCGAGGCGTG 482763
Query 115219 GATGAACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCT-TC 115275
| ||| | | |||| ||||| | ||| |||| ||| | ||| | ||| ||
Sbjct 482764 GGTGA--AGAACTTGCTAGACATGAGGTTGTACGTCT-CAATAACACGGTCAACTCTGTC 482820
Query 115276 CCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACC 115335
|| ||| |||| | || ||||||| ||||| ||||| || | | | ||
Sbjct 482821 ACCCCAAATGCCGACAGCAACACGCATAATCATGTGCTGGGGACGCTCGACAATCTTGCC 482880
Query 115336 ATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATA 115383
|||||| || | ||||| ||||| |||||||| ||||| ||
Sbjct 482881 GTCGAGCTTCAGCAGGTACGAACGCTCCAGGGTCTTGAAGCCAAAGTA 482928
>seq18
Length=564976
Score = 147 bits (162), Expect = 3e-30
Identities = 526/817 (64%), Gaps = 23/817 (3%)
Strand=Plus/Minus
Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817
|||||| ||||| ||||||||||||||||| ||||| ||| ||| ||| ||||||||
Sbjct 230650 GTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTACCGCCCAGCGAGATGTTCTCCAT 230591
Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGCACCC-CAATCTGTTTGAG 125871
|| ||||| |||||| | ||| | | | |||| || ||| | ||
Sbjct 230590 GAAGTCAAAGGGGTTCGTGGAGCGGTAGACCTTCTCGTTGCCAAGGGCAACC------AG 230537
Query 125872 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG 125931
||||| || | ||| |||||||||||| ||| || | |||||| || | ||
Sbjct 230536 CAGACGGTCGGCGACAAACTCAATGTACTGCTTCATGAGGTCGGCGTTCATGCCAAGCAG 230477
Query 125932 GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGAT 125991
| || || || || || | |||| |||||||||| | ||||| || | |||
Sbjct 230476 GGCGCAAGGCAGAGCCTCGGTCAGGAACTCCTTCTCAATGACAACGGCATCGGTGATGAT 230417
Query 125992 GGCGTGAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAA 126051
| | || | | | ||| | || || | |||||| ||||||
Sbjct 230416 CTCCTCAACAAGCTTCTTGCTAGGGCGGGTGTTCAGGTGCGAGAAGAGCAGGCAGGCAAA 230357
Query 126052 CTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCAT 126111
|| ||| |||||||||||||| || || || || || || ||| ||| || |||||
Sbjct 230356 GTCGGTGTGCAGACCCTCGTCACGCGAAATCAGCTCGTTGGAAAAGGTCAGACCGGGCAT 230297
Query 126112 GAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTC 126171
||||| ||||| || ||||||||| | || | |||||||||||||| |||||
Sbjct 230296 CAGACCACGCTTGCGCAGCCAGAAAATGGAGGCGAAAGCGCCCGAGAAGAAGATACCCTC 230237
Query 126172 CACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC---AAACCA 126228
|| || || || | ||||||| ||||||| ||||| ||| || |||
Sbjct 230236 GACGGCGGCAAAGGCCACCAGACGCTGGGCAAAGG---TCGACTCGCGGTCGGAAATCCA 230180
Query 126229 CTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAG 126288
||| | ||||| | ||||| || || || | ||| | ||| || | || ||
Sbjct 230179 CTTGAGAGCCCAGTCGGCCTTGCGGCGAATGCAAGGAATGGTGTCGATGGCGTTGAACAG 230120
Query 126289 TTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCC 126348
| | | | || || |||||||| | || ||||| || || || ||
Sbjct 230119 GTAGCTGCGCTGGGCAGGCTCCTTGATGTAGGTGTCGATGAGCAGCGAGTACGTCTCCGA 230060
Query 126349 GTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTA 126407
||||| | | ||| || | ||| | ||||||| |||| || ||| ||||| |
Sbjct 230059 GTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGGGATCTGGA 230001
Query 126408 CCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAA 126467
||||| | | ||| | | ||||| ||||| || || || |||| || |
Sbjct 230000 CCTCACCCGAGAAACGCTCGACCAAGTTCTCGTTGACAATGCCGTCCGAAGCAGCGAAGA 229941
Query 126468 ACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGT 126524
| ||||||| | | ||||| | || ||| | || ||||| || | ||||||||||
Sbjct 229940 AGGCCAGGACGTGCGAGATGAAGTACTTTTCGTCCTTGTTCATGCGGTTGTTCCAGTCGT 229881
Query 126525 CAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561
||||||||| || ||||| | |||||| || |||||
Sbjct 229880 GAAGATCCTTGGACAGATCAATCTCCTCGGCCGTCCA 229844
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597353375992400
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