Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03-
01] 30 sequences; 29,634,442 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq6 104 2e-17
>seq6
Length=1902109
Score = 104 bits (114), Expect = 2e-17
Identities = 147/205 (72%), Gaps = 4/205 (2%)
Strand=Plus/Minus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
|||||| || || | || || || || || |||||||| || | | ||||| | ||
Sbjct 700726 AAGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGACCATC 700667
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
||||||||||||||||| |||| || ||||||||||| |||||||| || || || ||
Sbjct 700666 CTCAAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCCGGAGGAATACCCTCCTTGTC 700607
Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCG--TCCACTTCTACAGTTACG 64408
|| || || ||| || || | |||| ||| || || ||||| | ||| | |
Sbjct 700606 CTGAATCTTGGACTTGACGTTGTCGATGGTAT--CCGACGACTCGACTTCGAGAGTAATG 700549
Query 64409 GTCTTGCCGGTCAAAGTTTTTACGA 64433
||||||||||| | || || ||||
Sbjct 700548 GTCTTGCCGGTGAGGGTCTTGACGA 700524
Score = 98.7 bits (108), Expect = 1e-15
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || ||||| | || || || || || |||||||| || | | ||||| | ||
Sbjct 700953 AGAACCAGATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCATCC 700894
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
||||||||||||||||| |||| || ||||||||||| |||||||| || || || ||
Sbjct 700893 TCAAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCC 700834
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| ||| || | ||||| | ||||| || | || | |||
Sbjct 700833 TGGATCTTCGACTTGACATTGTCAATGGTATCCGATGACTCCACCTCAAGGGTGATAGTC 700774
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| ||||| | ||| || || || || |||||
Sbjct 700773 TTTCCGGTAAGAGTCTTGACAAAGATCTGCAT 700742
Score = 93.3 bits (102), Expect = 4e-14
Identities = 150/214 (70%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || ||||| | ||||| || || || ||||||||||| | | || || | ||
Sbjct 701181 AGAACCAGATGCAGAGTCGACTCCTTCTGGATGTTGTAATCGGAAAGCGTACGGCCATCC 701122
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| |||||||| || ||| | || || ||||||||||| |||||||| || || || ||
Sbjct 701121 TCCAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGAGGAATACCCTCCTTGTCC 701062
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCG--TCCACTTCTACAGTTACGG 64409
|| || || ||| ||| || | || | ||| || || || |||| || | ||
Sbjct 701061 TGAATCTTCGACTTGACATTGTCAATCGTGT--CCGACGATTCGACCTCTAGCGTGATGG 701004
Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||||| |||| || || || || || |||||
Sbjct 701003 TCTTGCCAGTCAGCGTCTTCACAAAGATCTGCAT 700970
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499644612633200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |