Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03-
01] 30 sequences; 29,634,442 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq19 298 5e-76
>seq19
Length=545716
Score = 298 bits (330), Expect = 5e-76
Identities = 1083/1670 (65%), Gaps = 36/1670 (2%)
Strand=Plus/Minus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | ||||||| |||||| || |||||| |||||||| || ||| | || |||
Sbjct 482937 AACTACCAGTACTTTGGCTTCAAGACCCTGGAGCGTTCGTACCTGCTGAAGCTCGACGGC 482878
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| | || |||||| || || || || | ||||| || || |||| ||| || ||
Sbjct 482877 AAGATTGTCGAGCGTCCCCAGCACATGATTATGCGTGTTGCTGTCGGCATTTGGGGTGAC 482818
Query 93835 -GACATG-CCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGG 93892
|| || ||| |||| | | | | || |||| |||| | ||| |
Sbjct 482817 AGAGTTGACCG--TGTTATTGAGACGTACAACCTCATGTCTAGCAAGTTCTTCACCCACG 482760
Query 93893 CCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGA 93952
|| | || || || ||||||||||| || || | | ||| |||| || || ||||||
Sbjct 482759 CCTCGCCCACTCTTTTCAACGCGGGTACGCCCCAGGCTCAGCTGTCCTCTTGCTTCCTGG 482700
Query 93953 T-GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011
| ||| | |||| ||||| ||| || |||| ||| | |||||| ||||| |
Sbjct 482699 TTGAC-ATGAAGGAAGACTCGATCGAGGGCATTTACGATACTCTCAAGACTTGTGCTATG 482641
Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071
||||| || || || || ||||| ||| ||||||| | | ||||||| || ||
Sbjct 482640 ATCTCCAAGATGGCTGGTGGTATCGGTCTCAATGTCCACCGCATTCGTGCCACTGGCTCG 482581
Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131
||||| ||| || || || ||||||||||| || | || ||||| || || ||||||
Sbjct 482580 TACATTGCCGGCACAAACGGTACCTCCAACGGTATCATTCCCATGCTGCGTGTGTTCAAC 482521
Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191
||| | || |||||||| ||||||||||| | | | ||| | || || | ||
Sbjct 482520 AACACTGCCCGCTACGTCGACCAGGGTGGCAACAAGCGCCCTGGTGCCTTTGCCATTTAC 482461
Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251
|| ||||| ||||||||||| ||| | ||| | |||||||| ||||||||||||||
Sbjct 482460 CTGGAGCCGTGGCACGCGGATGTGTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAG 482401
Query 94252 GATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAA 94311
|| || | ||| | || || ||| || || ||| | || || || || |||||
Sbjct 482400 GAGGAGGTTCGCGCCCGCGATCTTTTCCTGGCGCTGTGGATTCCCGATCTCTTCATGAAG 482341
Query 94312 CGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCC 94371
|| |||||||| ||| | | ||||| || | || ||||| || || || || ||| |
Sbjct 482340 CGTGTCGAGAAGAACGCTGACTGGACCCTGATGTGCCCCAACGAGTGCCCTGGCCTGGCT 482281
Query 94372 GACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCC 94431
|| | || | ||||| | | |||| | ||||| ||||| | |
Sbjct 482280 GATTGCTACGGCGAGGAGTTTGAGGCCCTGTACGAAAAGTACGAGCAAGAGGGCCGTGGC 482221
Query 94432 AGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACG 94491
| | || | || |||||||||| | || |||| | ||| |||||
Sbjct 482220 CGCGCGTCGATCAAGGCCCAGAAGCTGTGGTACGCCATTCTGGAGGCCCAGACCGAGACA 482161
Query 94492 GGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACCT 94550
|| | || | ||| ||| |||||| | ||| |||| |||| ||||||| || ||||
Sbjct 482160 GGCAACCCGTTCATGCTGTACAAGGACCACTG-CAACCGCAAGAGCAACCAGAAGAACCT 482102
Query 94551 CGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGA 94610
|| ||| ||||| || |||||||| |||||| | ||||| | | || || ||
Sbjct 482101 GGGTACCATCCGCAGCTCCAACCTGTGCACTGAGATTATTGAGTACTGTGCGCCTGATGA 482042
Query 94611 GATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACAC 94670
| |||| ||||| ||||||| || | ||| | | || || ||| |||||
Sbjct 482041 GGTTGCCGTGTGCAACCTGGCTTCGCTGGCTCTGCCGTCGTTTGT-CGA-----CTACA- 481989
Query 94671 GTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATG--GTCTTG 94728
| | | || ||| | || |||| | || | |||| || ||
Sbjct 481988 -ACAAGAAC-GAGTACGACTTCCAGAAGCTGCACGAGGTCAC--CAAGGTTGTTGTGCGC 481933
Query 94729 AACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAAC 94788
||||||||| | | || ||| ||| ||||||||| || ||||| | ||| |||
Sbjct 481932 AACCTGAACCGCATCATTGACGTCAACCACTACCCCGTGCCTGAGGCCCACAACAGCAAC 481873
Query 94789 CTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATG 94848
|| || || ||||| || | || || |||||| | || || || | || | ||
Sbjct 481872 ATGCGTCACCGTCCCATTGGTGTTGGTGTTCAGGGTCTGGCTGATGCCTTCCTGGCGCTG 481813
Query 94849 CGTCTGCCCTACGACTCTGTCGACGC-GGCGGGTTTGAATTTGAACATATTCGAAAGCAT 94907
|| |||| | || |||| ||| || || | | || | || || |||| |||
Sbjct 481812 CGCATGCCTTTTGAGTCTGCCGAGGCTCGCAAG-CTCAACACTCAGATCTTTGAAACCAT 481754
Query 94908 TTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGG---CCACA 94964
|| ||| ||| ||| || | | | |||| ||| || ||| | ||
Sbjct 481753 CTACCACGCTGCCCTGACGGCCTCGATGGAAATTGCCA---AGGA-GGAGGGTACCTACT 481698
Query 94965 CGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGT 95024
| | ||| || |||||| | |||||||| | ||||||||| | ||| |||
Sbjct 481697 CTA--CGTATGAGGGTTCGCCCGTTTCTCAGGGCATCCTGCAGTTCGACATGTGGAATGT 481640
Query 95025 GAAGCCCTCGGGTCTGTACGACTGG--GAAGCTCTACGCGCTGATGTTATCAAACACGGT 95082
| |||| | || | |||||| | |||| | | || ||| | || | |||||
Sbjct 481639 CACGCCCAGCGACCTCTGGGACTGGGCGTCGCTCAAGGAGCAGAT-CAAGCAGA-ACGGT 481582
Query 95083 GTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGC 95142
||| ||| |||| || | || || ||||| |||||| |||| ||||||| || |||
Sbjct 481581 GTGCGCAACTCGCTTCTGCTTGCGCCGATGCCGACGGCCAGCACGTCGCAGATTCTGGGC 481522
Query 95143 AACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGG 95202
|||||||||| || || || | ||| |||||| | ||| | | || ||||| || ||
Sbjct 481521 AACAACGAGTGCTTTGAGCCGTACACTTCCAACATTTACCAGCGTCGTGTGCTGGCTGGC 481462
Query 95203 GAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGGGGT 95262
|| |||| || ||||| || || || || ||| | |||||| |||||
Sbjct 481461 GAGTTCCAGGTTGTCAACCCTTGGCTGCTGCGTGATCTGGTGGACCTGGGTCTGTGGTCG 481402
Query 95263 GACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATA 95322
||||| | ||||||| | | | ||||| || |||||||||| || ||
Sbjct 481401 GACAACATGAAGAACCGCATCATTGCGGAGAACGGATCTATCCAGAACATTCCCAGCATT 481342
Query 95323 CCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372
|| || || ||||||||||| |||||||| ||||||||||| |||||||
Sbjct 481341 CCCGACGATATCAAGGCGCTGTACAAGACTGTGTGGGAGATTTCGCAGCG 481292
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494723014478800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |