Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03- 01] 30 sequences; 29,634,442 total letters Query= NC_011588.1 Length=127615 Score E Sequences producing significant alignments: (Bits) Value seq1 86.0 5e-12 >seq1 Length=4116995 Score = 86.0 bits (94), Expect = 5e-12 Identities = 144/204 (71%), Gaps = 6/204 (3%) Strand=Plus/Plus Query 7574 ATGTGACATGGAGGAAGAGCCATTTTGTCCAAGTCTACCGGATTCCACGCGCTCATTATA 7633 |||||||| || || || ||||| || | || ||| ||||||||||||| ||||| || Sbjct 2530548 ATGTGACACGGCGGCAGCGCCATCTTCTTCAGGTCCGCCGGATTCCACGCACTCATAATG 2530607 Query 7634 ATGCGACGACTTGTA--GGGTCCTCTT-TGATGGTGCGAATCACTTGTTGCAATTGGTCG 7690 ||||| | | | ||| |||| |||| | | |||| | ||| | | || |||||| Sbjct 2530608 ATGCGTCTA-TCGTAGGGGGTGTTCTTCAGCTTGTGC--ACCACCTCTGCCAGCTGGTCG 2530664 Query 7691 ACCCCTTTATTCGTATAGTCCGTGTTACAATCAACGTACGATGCGCCAAAATGCCTCCAT 7750 || || | ||| ||||| || | ||| || ||| |||||||||||||| ||| Sbjct 2530665 ACACCCTGGCCCGTGTAGTCTGTCTGCGCATCGACATACTCTGCGCCAAAATGCCGCCAC 2530724 Query 7751 TGAAAACCGTAAATCGGACCTAAG 7774 || || ||||| | || || ||| Sbjct 2530725 TGGAACCCGTACACGGGGCCCAAG 2530748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408243050736080