Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03-
01] 30 sequences; 29,634,442 total letters
Query= NC_011588.1
Length=127615
Score E
Sequences producing significant alignments: (Bits) Value
seq1 86.0 5e-12
>seq1
Length=4116995
Score = 86.0 bits (94), Expect = 5e-12
Identities = 144/204 (71%), Gaps = 6/204 (3%)
Strand=Plus/Plus
Query 7574 ATGTGACATGGAGGAAGAGCCATTTTGTCCAAGTCTACCGGATTCCACGCGCTCATTATA 7633
|||||||| || || || ||||| || | || ||| ||||||||||||| ||||| ||
Sbjct 2530548 ATGTGACACGGCGGCAGCGCCATCTTCTTCAGGTCCGCCGGATTCCACGCACTCATAATG 2530607
Query 7634 ATGCGACGACTTGTA--GGGTCCTCTT-TGATGGTGCGAATCACTTGTTGCAATTGGTCG 7690
||||| | | | ||| |||| |||| | | |||| | ||| | | || ||||||
Sbjct 2530608 ATGCGTCTA-TCGTAGGGGGTGTTCTTCAGCTTGTGC--ACCACCTCTGCCAGCTGGTCG 2530664
Query 7691 ACCCCTTTATTCGTATAGTCCGTGTTACAATCAACGTACGATGCGCCAAAATGCCTCCAT 7750
|| || | ||| ||||| || | ||| || ||| |||||||||||||| |||
Sbjct 2530665 ACACCCTGGCCCGTGTAGTCTGTCTGCGCATCGACATACTCTGCGCCAAAATGCCGCCAC 2530724
Query 7751 TGAAAACCGTAAATCGGACCTAAG 7774
|| || ||||| | || || |||
Sbjct 2530725 TGGAACCCGTACACGGGGCCCAAG 2530748
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408243050736080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |