Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03-
01] 30 sequences; 29,634,442 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq19 91.5 1e-13
seq6 91.5 1e-13
>seq19
Length=545716
Score = 91.5 bits (100), Expect = 1e-13
Identities = 150/213 (70%), Gaps = 4/213 (2%)
Strand=Plus/Minus
Query 124105 TGCAGTACGACATGTGGAATGCTACACCGACAAATTTGTGGGACTGGAGCGTTTTAAAAC 124164
|||||| |||||||||||||| || || | | | ||||||||| |||| ||
Sbjct 481661 TGCAGTTCGACATGTGGAATGTCACGCCCAGCGACCTCTGGGACTGG-GCGTCGCTCAAG 481603
Query 124165 AACGCATATCGAC--GCACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGCCGACGGC 124222
| ||| ||| | | ||||| |||| |||||||| || | ||| |||||||||||
Sbjct 481602 GA-GCAGATCAAGCAGAACGGTGTGCGCAACTCGCTTCTGCTTGCGCCGATGCCGACGGC 481544
Query 124223 AACCACTGCTCAAATTTTAGGAAACAACGAATCCTTCGAGCCGTTCACTAACAATTTGTA 124282
| ||| | || ||| | || |||||||| | ||| ||||||| |||| ||| | ||
Sbjct 481543 CAGCACGTCGCAGATTCTGGGCAACAACGAGTGCTTTGAGCCGTACACTTCCAACATTTA 481484
Query 124283 CGTGCGACGAGTGTTAGCCGGCGATTTTCAAGT 124315
| ||| || ||| | || ||||| || || ||
Sbjct 481483 CCAGCGTCGTGTGCTGGCTGGCGAGTTCCAGGT 481451
>seq6
Length=1902109
Score = 91.5 bits (100), Expect = 1e-13
Identities = 153/219 (70%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| | | ||| || || || || || ||||| ||||| || || ||
Sbjct 700743 ATACCACCACGGAGACGAAGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCA 700684
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| || | ||| || | || || || ||| | |||| || |||||||||||
Sbjct 700683 GAAAGAGTGCGACCATCCTCAAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCCGGA 700624
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
||||| || || || || ||||| || |||| || | || | ||| || || |||||
Sbjct 700623 GGAATACCCTCCTTGTCCTGAATCTTGGACTTGA-CGTTGTCGATGGTATCCGACGACTC 700565
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTAC 45328
|||||||||||||| || |||||||| || || || ||
Sbjct 700564 GACTTCGAGAGTAATGGTCTTGCCGGTGAGGGTCTTGAC 700526
Score = 86.0 bits (94), Expect = 6e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| | | || |||||||| || || ||||| ||||| || || |||
Sbjct 700971 ATACCACCACGGAGGCGGAGAACCAGATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCG 700912
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| || | ||| || | || || || ||| | |||| || |||||||||||
Sbjct 700911 GAAAGAGTGCGACCATCCTCAAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCCGGA 700852
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
|||||||| || || || || || || |||| || | ||| || || |||||
Sbjct 700851 GGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCAATGGTATCCGATGACTCC 700792
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || | || || ||||| ||||| || ||||| || |||||
Sbjct 700791 ACCTCAAGGGTGATAGTCTTTCCGGTAAGAGTCTTGACAAAGATCTGCAT 700742
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452003030498800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |