Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03- 01] 30 sequences; 29,634,442 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq19 210 3e-49 seq18 136 5e-27 >seq19 Length=545716 Score = 210 bits (232), Expect = 3e-49 Identities = 1170/1846 (63%), Gaps = 51/1846 (3%) Strand=Plus/Plus Query 115526 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 115585 ||||||||||||| ||| |||| | || ||||||||||| ||||||||||| | Sbjct 481107 TGAACTGAATGGGCGCCGCAGCCGCCTGCGTACGCAGGTAGTACATGCCCGTCTTGAGAC 481166 Query 115586 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 115645 || |||||||| | | ||||| || | |||| | || || | |||| Sbjct 481167 CCAGCTTCCAGCCCGCAAAGTGCATGCTGGTAATCTTGCCCATCGTAGGGTCCTTCATGT 481226 Query 115646 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCA 115705 | ||| | ||||| || ||||| ||| || ||||| || ||||| | || Sbjct 481227 GAATGTTGAGCGACTGGGACTGGTCGATAAAGGCACCACGATCAGCAGCCATCTG---CA 481283 Query 115706 CATCCTTCATCTTG---ATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGA 115762 || || | || || ||||||||||| |||| || ||| ||||| || |||| Sbjct 481284 CAACCGTACGCTGCGAAATCTCCCACACAGTCTTGTACAGCGCCTTGATATCGTC-GGGA 481342 Query 115763 TATCCACG--ATATTTTGGATAGAGCCACCTGCCTTGACCATGAGATCCTTCATATCCTT 115820 || | | || || |||||||| || || | ||| | | |||||| | | Sbjct 481343 -ATGCTGGGAATGTTCTGGATAGATCCGTTCTCCGCAATGATGCGGTTCTTCATGTTGTC 481401 Query 115821 TGACCAGAGACCAATCTTCTTGAGATCCTCCACG-AGGTGCTTA---TTGACAACAACAA 115876 ||||| ||||| | | | ||||| ||| || || | |||||||| | Sbjct 481402 CGACCACAGACCCAGGTCCACCAGATC----ACGCAGCAGCCAAGGGTTGACAACCTGGA 481457 Query 115877 ACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCAT 115936 |||| || || || || | | | || ||||||| ||||| |||||||||||||| | Sbjct 481458 ACTCGCCAGCCAGCACACGACGCTGGTAAATGTTGGAAGTGTACGGCTCAAAGCACTCGT 481517 Query 115937 TGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGC 115996 |||| |||| || || | ||| ||| || ||||| || || | ||||| ||||| Sbjct 481518 TGTTGCCCAGAATCTGCGACGTGCTGGCCGTCGGCATCGGCGCAAGCAGAAGCGAGTTGC 481577 Query 115997 GGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCT 116056 | | ||| | | | || | |||||||| | ||||||| || | | | | Sbjct 481578 GCACACCGTTCTGCTTGATCTGCTCCTTGAGCGACGCCCAGTCCCAGAGGTCGCTGGGCG 481637 Query 116057 CCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCT 116116 | | |||||| || ||||| ||||| || || || | ||||| |||||| | || Sbjct 481638 TGACATTCCACATGTCGAACTGCAGGATGCCCTGAGAAACGGGCGAACCCTCATACGTAG 481697 Query 116117 CATATGGGCCCTCAACCTCCGCCAATTC---GGAGCTCGCCTCGAGGGCTGCGTGATACA 116173 || | ||||| ||| || | ||| ||| ||| ||||| ||||| || | Sbjct 481698 AGTAGGTACCCTCCTCCTTGGCAATTTCCATCGAG---GCCGTCAGGGCAGCGTGGTAGA 481754 Query 116174 TTGTCTCAAAAATGCGAGCATTCA--TTGCCTTGGCCTCGTCGGAATCAAACGCGAGACG 116231 | || ||||| || ||| || | |||| |||||| | || ||||| | | || Sbjct 481755 TGGTTTCAAAGATCTGAGTGTTGAGCTTGC--GAGCCTCGGCAGACTCAAAAGGCATGCG 481812 Query 116232 GCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCAT 116291 | | || |||| || ||||| || ||||| | ||||| || || || | ||| Sbjct 481813 CAGCGCCAGGAAGGCATCAGCCAGACCCTGAACACCAACACCAATGGGACGGTGACGCAT 481872 Query 116292 ATTAGACTTTCGAGCGGTCTC---CACGGGATAAAAATTCCTATCGATAACCCTATTTAG 116348 || || | | | || ||| |||||| || || || || | | || || Sbjct 481873 GTT--GCTGTTGTG-GGCCTCAGGCACGGGGTAGTGGTTGACGTCAATGATGCGGTTCAG 481929 Query 116349 ATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTC 116408 || |||||||| |||| || || ||||| | | | || | | | | Sbjct 481930 GTTGCGCACAACAACCTTGGTGACCTCGTGCAGCTTCTGGAAGTCGTACTCGTTCTTGTT 481989 Query 116409 TTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTT 116468 | | |||| || || || || | || ||||| || ||||| | |||||| Sbjct 481990 GTAGTCGACAAACGACGGCAGAGCCAGCGAAGCCAGGTTGCACACGGCAACCTCATCAGG 482049 Query 116469 ATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTT 116528 || |||||| ||||| || || |||| || || || ||||| |||| |||||| Sbjct 482050 CGCACAGTACTCAATAATCTCAGTGCACAGGTTGGAGCTGCGGATGGTACCCAGGTTCTT 482109 Query 116529 TTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGT 116588 || || ||| ||| || |||||||| ||||| | || | || ||||| || Sbjct 482110 CTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAGCATGAACGGGTTGCCTGTCTCGGT 482169 Query 116589 TTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCC 116647 |||| || ||||| || | ||| | | || | | || | | | ||| | | || | Sbjct 482170 CTGGGCCTCCAGAATGGCGTACCACAGCTTCTGGGCCTTG-ATCGACGCGCGGCCACGGC 482228 Query 116648 CCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGC-CTCTGAGAGC 116706 |||| | |||||||||| ||| |||||||||||||| || || ||| || | || Sbjct 482229 CCTCTTGCTCGTACTTTTCGTACAGGGCCTCAAACTCCTC-GCCGTAGCAATCAGCCAGG 482287 Query 116707 CCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATG 116766 || || || | || || | || | ||| | | | || ||| || ||||||||| Sbjct 482288 CCAGGGCACTCGTTGGGGCACATCAGGGTCCAGTCAGCGTTCTTCTCGACACGCTTCATG 482347 Query 116767 AAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCC 116826 ||||| || || ||||| |||||| ||| ||||| || |||| | || || | || Sbjct 482348 AAGAGATCGGGAATCCACAGCGCCAGGAAAAGATCGCGGGCGCGAACCTCCTCCTTGCCG 482407 Query 116827 TGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACC 116886 || || |||| || | || || | | ||||||||||||||| |||||||| | Sbjct 482408 TGGTTCTTGCGCAGGTCAAGGAACTCAAACACATCCGCGTGCCACGGCTCCAGGTAAATG 482467 Query 116887 GCGATTGACCCCTTGCG---ACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAAT 116943 || | | || ||| ||| |||||| || || | || || ||| || Sbjct 482468 GCAAAGGCACCAGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGGGCAGTGTTGTTGAAC 482527 Query 116944 ACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TACGAGACT 117001 || || ||||| ||||||||||| | || || ||||| || || |||||| | Sbjct 482528 ACACGCAGCATGGGAATGATACCGTTGGAGGTACCGTTTGTGCCGGCAATGTACGAGCC- 482586 Query 117002 TGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTG 117061 |||| | | ||||| | | ||| ||||| || ||| ||| ||||| | Sbjct 482587 -AGTGGCACGAATGCGGTGGACATTGAGACCGATACCACCAGCCATCTTGGAGATCATAG 482645 Query 117062 CGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGA 117121 | || | ||||| | |||| || || ||||||||||| |||| | | | |||| Sbjct 482646 CACAAGTCTTGAGAGTATCGTAAATGCCCTCGATCGAGTCTTCCTTCATGTCAACCAGGA 482705 Query 117122 AGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGA 117181 |||| |||| || | | || ||||| |||||||| || || || | |||||| Sbjct 482706 AGCAAGAGGACAGCTGAGCCTGGGGCGTACCCGCGTTGAAAAGAGTGGGCGAGGCGTGGG 482765 Query 117182 TGAACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCT-TCCC 117238 ||| | | |||| ||||| | ||| ||||| | ||| || | ||| || | Sbjct 482766 TGA--AGAACTTGCTAGACATGAGGTTGTACGTCTCAATAACA-CGGTCAACTCTGTCAC 482822 Query 117239 CGTGAATACCGATTGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCAT 117298 | ||| |||| | || ||||||| ||||| ||||| || | | | || | Sbjct 482823 CCCAAATGCCGACAGCAACACGCATAATCATGTGCTGGGGACGCTCGACAATCTTGCCGT 482882 Query 117299 CGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATA 117344 ||||| || | ||||| ||||| |||||||| ||||| || Sbjct 482883 CGAGCTTCAGCAGGTACGAACGCTCCAGGGTCTTGAAGCCAAAGTA 482928 >seq18 Length=564976 Score = 136 bits (150), Expect = 5e-27 Identities = 529/819 (65%), Gaps = 27/819 (3%) Strand=Plus/Minus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 |||||| || || ||||||||||||||||| ||||| || | || ||| |||||||| Sbjct 230650 GTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTACCGCCCAGCGAGATGTTCTCCAT 230591 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGCACCC-CAATCTGTTTGAG 127344 || ||||| |||||| | ||| | | | |||| || ||| | || Sbjct 230590 GAAGTCAAAGGGGTTCGTGGAGCGGTAGACCTTCTCGTTGCCAAGGGCAACC------AG 230537 Query 127345 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG 127404 ||||| || | ||| |||||||||||| ||| || | |||||| || | || Sbjct 230536 CAGACGGTCGGCGACAAACTCAATGTACTGCTTCATGAGGTCGGCGTTCATGCCAAGCAG 230477 Query 127405 GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGAT 127464 | || || || || || | |||| ||||||||||| | || || || | ||| Sbjct 230476 GGCGCAAGGCAGAGCCTCGGTCAGGAACTCCTTCTCAATGACAACGGCATCGGTGATGAT 230417 Query 127465 GGCGTGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGT-CTTGAAGAGTTCCA--CAG- 127520 | | || | | | | ||| | || | | || | |||||| || ||| Sbjct 230416 CTCCTCAACAAGCTTCTTGCTAGGGCGGGTGT-TCAGGTGCGAGAAGAG---CAGGCAGG 230361 Query 127521 CAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTG 127580 |||| || ||| |||||||||||||| || || || || || || ||| |||||| | Sbjct 230360 CAAAGTCGGTGTGCAGACCCTCGTCACGCGAAATCAGCTCGTTGGAAAAGGTCAGACCGG 230301 Query 127581 GCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCC 127640 |||| ||||| ||||| || ||||||||| | || | ||| ||||||||||| | Sbjct 230300 GCATCAGACCACGCTTGCGCAGCCAGAAAATGGAGGCGAAAGCGCCCGAGAAGAAGATAC 230241 Query 127641 CCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAA-C 127699 |||| || || || || | ||||||| |||||||| || | || ||| | Sbjct 230240 CCTCGACGGCGGCAAAGGCCACCAGACGCTGGGCAAAGG-TCGACTCGCGGTCGGAAATC 230182 Query 127700 CACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAG 127759 ||||| | ||||| | ||||| || || || | ||| | ||| || | || Sbjct 230181 CACTTGAGAGCCCAGTCGGCCTTGCGGCGAATGCAAGGAATGGTGTCGATGGCGTTGAAC 230122 Query 127760 AGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCG 127819 || | | | | || || |||||||| | || ||||| || || || || Sbjct 230121 AGGTAGCTGCGCTGGGCAGGCTCCTTGATGTAGGTGTCGATGAGCAGCGAGTACGTCTCC 230062 Query 127820 CCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTG 127878 ||||| | | ||| || | ||| | ||||||| |||| || ||| ||||| Sbjct 230061 GAGTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGGGATCTG 230003 Query 127879 TACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAA 127938 |||||| | | ||| | | ||||| ||||| || || || |||| || Sbjct 230002 GACCTCACCCGAGAAACGCTCGACCAAGTTCTCGTTGACAATGCCGTCCGAAGCAGCGAA 229943 Query 127939 AAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTC 127995 || ||||||| | | ||||| | || ||| | || ||||| || | |||||||| Sbjct 229942 GAAGGCCAGGACGTGCGAGATGAAGTACTTTTCGTCCTTGTTCATGCGGTTGTTCCAGTC 229883 Query 127996 GTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 || |||||||| || ||||| | |||||| || ||||| Sbjct 229882 GTGAAGATCCTTGGACAGATCAATCTCCTCGGCCGTCCA 229844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506969934800