Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03-
01] 30 sequences; 29,634,442 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq19 210 3e-49
seq18 136 5e-27
>seq19
Length=545716
Score = 210 bits (232), Expect = 3e-49
Identities = 1170/1846 (63%), Gaps = 51/1846 (3%)
Strand=Plus/Plus
Query 115526 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 115585
||||||||||||| ||| |||| | || ||||||||||| ||||||||||| |
Sbjct 481107 TGAACTGAATGGGCGCCGCAGCCGCCTGCGTACGCAGGTAGTACATGCCCGTCTTGAGAC 481166
Query 115586 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 115645
|| |||||||| | | ||||| || | |||| | || || | ||||
Sbjct 481167 CCAGCTTCCAGCCCGCAAAGTGCATGCTGGTAATCTTGCCCATCGTAGGGTCCTTCATGT 481226
Query 115646 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCA 115705
| ||| | ||||| || ||||| ||| || ||||| || ||||| | ||
Sbjct 481227 GAATGTTGAGCGACTGGGACTGGTCGATAAAGGCACCACGATCAGCAGCCATCTG---CA 481283
Query 115706 CATCCTTCATCTTG---ATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGA 115762
|| || | || || ||||||||||| |||| || ||| ||||| || ||||
Sbjct 481284 CAACCGTACGCTGCGAAATCTCCCACACAGTCTTGTACAGCGCCTTGATATCGTC-GGGA 481342
Query 115763 TATCCACG--ATATTTTGGATAGAGCCACCTGCCTTGACCATGAGATCCTTCATATCCTT 115820
|| | | || || |||||||| || || | ||| | | |||||| | |
Sbjct 481343 -ATGCTGGGAATGTTCTGGATAGATCCGTTCTCCGCAATGATGCGGTTCTTCATGTTGTC 481401
Query 115821 TGACCAGAGACCAATCTTCTTGAGATCCTCCACG-AGGTGCTTA---TTGACAACAACAA 115876
||||| ||||| | | | ||||| ||| || || | |||||||| |
Sbjct 481402 CGACCACAGACCCAGGTCCACCAGATC----ACGCAGCAGCCAAGGGTTGACAACCTGGA 481457
Query 115877 ACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCAT 115936
|||| || || || || | | | || ||||||| ||||| |||||||||||||| |
Sbjct 481458 ACTCGCCAGCCAGCACACGACGCTGGTAAATGTTGGAAGTGTACGGCTCAAAGCACTCGT 481517
Query 115937 TGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGC 115996
|||| |||| || || | ||| ||| || ||||| || || | ||||| |||||
Sbjct 481518 TGTTGCCCAGAATCTGCGACGTGCTGGCCGTCGGCATCGGCGCAAGCAGAAGCGAGTTGC 481577
Query 115997 GGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCT 116056
| | ||| | | | || | |||||||| | ||||||| || | | | |
Sbjct 481578 GCACACCGTTCTGCTTGATCTGCTCCTTGAGCGACGCCCAGTCCCAGAGGTCGCTGGGCG 481637
Query 116057 CCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCT 116116
| | |||||| || ||||| ||||| || || || | ||||| |||||| | ||
Sbjct 481638 TGACATTCCACATGTCGAACTGCAGGATGCCCTGAGAAACGGGCGAACCCTCATACGTAG 481697
Query 116117 CATATGGGCCCTCAACCTCCGCCAATTC---GGAGCTCGCCTCGAGGGCTGCGTGATACA 116173
|| | ||||| ||| || | ||| ||| ||| ||||| ||||| || |
Sbjct 481698 AGTAGGTACCCTCCTCCTTGGCAATTTCCATCGAG---GCCGTCAGGGCAGCGTGGTAGA 481754
Query 116174 TTGTCTCAAAAATGCGAGCATTCA--TTGCCTTGGCCTCGTCGGAATCAAACGCGAGACG 116231
| || ||||| || ||| || | |||| |||||| | || ||||| | | ||
Sbjct 481755 TGGTTTCAAAGATCTGAGTGTTGAGCTTGC--GAGCCTCGGCAGACTCAAAAGGCATGCG 481812
Query 116232 GCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCAT 116291
| | || |||| || ||||| || ||||| | ||||| || || || | |||
Sbjct 481813 CAGCGCCAGGAAGGCATCAGCCAGACCCTGAACACCAACACCAATGGGACGGTGACGCAT 481872
Query 116292 ATTAGACTTTCGAGCGGTCTC---CACGGGATAAAAATTCCTATCGATAACCCTATTTAG 116348
|| || | | | || ||| |||||| || || || || | | || ||
Sbjct 481873 GTT--GCTGTTGTG-GGCCTCAGGCACGGGGTAGTGGTTGACGTCAATGATGCGGTTCAG 481929
Query 116349 ATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTC 116408
|| |||||||| |||| || || ||||| | | | || | | | |
Sbjct 481930 GTTGCGCACAACAACCTTGGTGACCTCGTGCAGCTTCTGGAAGTCGTACTCGTTCTTGTT 481989
Query 116409 TTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTT 116468
| | |||| || || || || | || ||||| || ||||| | ||||||
Sbjct 481990 GTAGTCGACAAACGACGGCAGAGCCAGCGAAGCCAGGTTGCACACGGCAACCTCATCAGG 482049
Query 116469 ATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTT 116528
|| |||||| ||||| || || |||| || || || ||||| |||| ||||||
Sbjct 482050 CGCACAGTACTCAATAATCTCAGTGCACAGGTTGGAGCTGCGGATGGTACCCAGGTTCTT 482109
Query 116529 TTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGT 116588
|| || ||| ||| || |||||||| ||||| | || | || ||||| ||
Sbjct 482110 CTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAGCATGAACGGGTTGCCTGTCTCGGT 482169
Query 116589 TTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCC 116647
|||| || ||||| || | ||| | | || | | || | | | ||| | | || |
Sbjct 482170 CTGGGCCTCCAGAATGGCGTACCACAGCTTCTGGGCCTTG-ATCGACGCGCGGCCACGGC 482228
Query 116648 CCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGC-CTCTGAGAGC 116706
|||| | |||||||||| ||| |||||||||||||| || || ||| || | ||
Sbjct 482229 CCTCTTGCTCGTACTTTTCGTACAGGGCCTCAAACTCCTC-GCCGTAGCAATCAGCCAGG 482287
Query 116707 CCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATG 116766
|| || || | || || | || | ||| | | | || ||| || |||||||||
Sbjct 482288 CCAGGGCACTCGTTGGGGCACATCAGGGTCCAGTCAGCGTTCTTCTCGACACGCTTCATG 482347
Query 116767 AAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCC 116826
||||| || || ||||| |||||| ||| ||||| || |||| | || || | ||
Sbjct 482348 AAGAGATCGGGAATCCACAGCGCCAGGAAAAGATCGCGGGCGCGAACCTCCTCCTTGCCG 482407
Query 116827 TGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACC 116886
|| || |||| || | || || | | ||||||||||||||| |||||||| |
Sbjct 482408 TGGTTCTTGCGCAGGTCAAGGAACTCAAACACATCCGCGTGCCACGGCTCCAGGTAAATG 482467
Query 116887 GCGATTGACCCCTTGCG---ACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAAT 116943
|| | | || ||| ||| |||||| || || | || || ||| ||
Sbjct 482468 GCAAAGGCACCAGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGGGCAGTGTTGTTGAAC 482527
Query 116944 ACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TACGAGACT 117001
|| || ||||| ||||||||||| | || || ||||| || || |||||| |
Sbjct 482528 ACACGCAGCATGGGAATGATACCGTTGGAGGTACCGTTTGTGCCGGCAATGTACGAGCC- 482586
Query 117002 TGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTG 117061
|||| | | ||||| | | ||| ||||| || ||| ||| ||||| |
Sbjct 482587 -AGTGGCACGAATGCGGTGGACATTGAGACCGATACCACCAGCCATCTTGGAGATCATAG 482645
Query 117062 CGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGA 117121
| || | ||||| | |||| || || ||||||||||| |||| | | | ||||
Sbjct 482646 CACAAGTCTTGAGAGTATCGTAAATGCCCTCGATCGAGTCTTCCTTCATGTCAACCAGGA 482705
Query 117122 AGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGA 117181
|||| |||| || | | || ||||| |||||||| || || || | ||||||
Sbjct 482706 AGCAAGAGGACAGCTGAGCCTGGGGCGTACCCGCGTTGAAAAGAGTGGGCGAGGCGTGGG 482765
Query 117182 TGAACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCT-TCCC 117238
||| | | |||| ||||| | ||| ||||| | ||| || | ||| || |
Sbjct 482766 TGA--AGAACTTGCTAGACATGAGGTTGTACGTCTCAATAACA-CGGTCAACTCTGTCAC 482822
Query 117239 CGTGAATACCGATTGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCAT 117298
| ||| |||| | || ||||||| ||||| ||||| || | | | || |
Sbjct 482823 CCCAAATGCCGACAGCAACACGCATAATCATGTGCTGGGGACGCTCGACAATCTTGCCGT 482882
Query 117299 CGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATA 117344
||||| || | ||||| ||||| |||||||| ||||| ||
Sbjct 482883 CGAGCTTCAGCAGGTACGAACGCTCCAGGGTCTTGAAGCCAAAGTA 482928
>seq18
Length=564976
Score = 136 bits (150), Expect = 5e-27
Identities = 529/819 (65%), Gaps = 27/819 (3%)
Strand=Plus/Minus
Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290
|||||| || || ||||||||||||||||| ||||| || | || ||| ||||||||
Sbjct 230650 GTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTACCGCCCAGCGAGATGTTCTCCAT 230591
Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGCACCC-CAATCTGTTTGAG 127344
|| ||||| |||||| | ||| | | | |||| || ||| | ||
Sbjct 230590 GAAGTCAAAGGGGTTCGTGGAGCGGTAGACCTTCTCGTTGCCAAGGGCAACC------AG 230537
Query 127345 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG 127404
||||| || | ||| |||||||||||| ||| || | |||||| || | ||
Sbjct 230536 CAGACGGTCGGCGACAAACTCAATGTACTGCTTCATGAGGTCGGCGTTCATGCCAAGCAG 230477
Query 127405 GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGAT 127464
| || || || || || | |||| ||||||||||| | || || || | |||
Sbjct 230476 GGCGCAAGGCAGAGCCTCGGTCAGGAACTCCTTCTCAATGACAACGGCATCGGTGATGAT 230417
Query 127465 GGCGTGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGT-CTTGAAGAGTTCCA--CAG- 127520
| | || | | | | ||| | || | | || | |||||| || |||
Sbjct 230416 CTCCTCAACAAGCTTCTTGCTAGGGCGGGTGT-TCAGGTGCGAGAAGAG---CAGGCAGG 230361
Query 127521 CAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTG 127580
|||| || ||| |||||||||||||| || || || || || || ||| |||||| |
Sbjct 230360 CAAAGTCGGTGTGCAGACCCTCGTCACGCGAAATCAGCTCGTTGGAAAAGGTCAGACCGG 230301
Query 127581 GCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCC 127640
|||| ||||| ||||| || ||||||||| | || | ||| ||||||||||| |
Sbjct 230300 GCATCAGACCACGCTTGCGCAGCCAGAAAATGGAGGCGAAAGCGCCCGAGAAGAAGATAC 230241
Query 127641 CCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAA-C 127699
|||| || || || || | ||||||| |||||||| || | || ||| |
Sbjct 230240 CCTCGACGGCGGCAAAGGCCACCAGACGCTGGGCAAAGG-TCGACTCGCGGTCGGAAATC 230182
Query 127700 CACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAG 127759
||||| | ||||| | ||||| || || || | ||| | ||| || | ||
Sbjct 230181 CACTTGAGAGCCCAGTCGGCCTTGCGGCGAATGCAAGGAATGGTGTCGATGGCGTTGAAC 230122
Query 127760 AGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCG 127819
|| | | | | || || |||||||| | || ||||| || || || ||
Sbjct 230121 AGGTAGCTGCGCTGGGCAGGCTCCTTGATGTAGGTGTCGATGAGCAGCGAGTACGTCTCC 230062
Query 127820 CCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTG 127878
||||| | | ||| || | ||| | ||||||| |||| || ||| |||||
Sbjct 230061 GAGTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGGGATCTG 230003
Query 127879 TACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAA 127938
|||||| | | ||| | | ||||| ||||| || || || |||| ||
Sbjct 230002 GACCTCACCCGAGAAACGCTCGACCAAGTTCTCGTTGACAATGCCGTCCGAAGCAGCGAA 229943
Query 127939 AAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTC 127995
|| ||||||| | | ||||| | || ||| | || ||||| || | ||||||||
Sbjct 229942 GAAGGCCAGGACGTGCGAGATGAAGTACTTTTCGTCCTTGTTCATGCGGTTGTTCCAGTC 229883
Query 127996 GTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034
|| |||||||| || ||||| | |||||| || |||||
Sbjct 229882 GTGAAGATCCTTGGACAGATCAATCTCCTCGGCCGTCCA 229844
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613506969934800
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