Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03-
01] 30 sequences; 29,634,442 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq19 197 2e-45
>seq19
Length=545716
Score = 197 bits (218), Expect = 2e-45
Identities = 466/685 (68%), Gaps = 18/685 (3%)
Strand=Plus/Plus
Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAG--GCCTGCTT-CTCAGATAGTACAT 203895
|| ||| || ||||||||||||| | | |||| |||||| | | ||| ||||||||
Sbjct 481096 CTGGTCAACAGTGAACTGAATGGG---CGCCGCAGCCGCCTGCGTACGCAGGTAGTACAT 481152
Query 203896 GCCGGTCTTTAGGCCCTTCTGCCA-CCCGTACATGTGCATGGAAGACAGTTTGCTCACGT 203954
||| ||||| || ||| || ||| |||| | | ||||||| | | |||| ||
Sbjct 481153 GCCCGTCTTGAGACCCAGCTTCCAGCCCGCA-AAGTGCATGCTGGTAATCTTGCCCATCG 481211
Query 203955 TGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCT 204013
| ||||| |||||||||||| || |||||| |||||||| |||||| || |||||
Sbjct 481212 TAGGGTCCTTCATGTGAATGTTGAGCGACTGGGACTGGTCGAT-AAAGGCACCACGATCA 481270
Query 204014 GCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCT 204072
|| ||||| | | || || |||||||||||||||||| |||||| ||| || || |
Sbjct 481271 GCAGCCATCTGCACAACCGTACGCTGCGAAATCTCCCACACAGTCTTGTACAGCGCCT-T 481329
Query 204073 GGTGTGTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCA 204131
| | | | || | || | || || ||| || ||||| || || || | |
Sbjct 481330 GATATCGT-CGGGAATGCTGGGAATGTTCTGGATAGATCCGTTCTCCGCAATGATGCGGT 481388
Query 204132 TCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGA 204191
|| || | | ||| ||||| |||| | ||| || |||| ||| |||||||
Sbjct 481389 TCTTCATGTTGTCCGACCACAGACCCAGGTCCACCAGATCACGCAGCAGCCAAGGGTTGA 481448
Query 204192 TGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGA 204251
| ||| || || || | |||||| | || | | | |||| ||| | || || |
Sbjct 481449 CAACCTGGAACTCGCCAGCCAGCACACGACGCTGGTAAATGTTGGAAGTGTACGGCTCAA 481508
Query 204252 ACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCA 204311
| |||||||||||| | |||||| | ||||||||||| ||||| || || || || |
Sbjct 481509 AGCACTCGTTGTTGCCCAGAATCTGCGACGTGCTGGCCGTCGGCATCGGCGCAAGCAGAA 481568
Query 204312 GGGAGTTGCGCACACCGTATTTTTGGACCCTGC-GCTTCAGAGAGGTCCAGTCGTGCATC 204370
| |||||||||||||||| | | || |||| ||| || || | |||||| |
Sbjct 481569 GCGAGTTGCGCACACCGTTCTGCTTGA-TCTGCTCCTTGAGCGACGCCCAGTCCCAGAGG 481627
Query 204371 GCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCC 204430
| ||||| | || ||||||||||||||| | |||||| ||| || || |||
Sbjct 481628 TCGCTGGGCGTGACATTCCACATGTCGAACTGCAGGATGCCCTGAGAAACGGGCGAACCC 481687
Query 204431 TTGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCA-CGAGGCGGCCATGGCGTG 204489
| ||||| | || | ||||| | || || || || |||||| | || |||
Sbjct 481688 TCATACGTAGAGTAGGTACCCTCCTCCT-TGGCAATTTCCATCGAGGCCGTCAGGGCAGC 481746
Query 204490 ATAGTACATGGTCTCAAAGATCTGA 204514
| ||| ||||| ||||||||||||
Sbjct 481747 GTGGTAGATGGTTTCAAAGATCTGA 481771
Score = 129 bits (142), Expect = 9e-25
Identities = 449/684 (66%), Gaps = 24/684 (4%)
Strand=Plus/Plus
Query 204923 CCCACATGCTGCTGGTTAGACTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATT 204982
|||| | || |||||| ||||||||| ||| ||||||||||| ||||||||| |
Sbjct 482099 CCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAGCATGAACGGGTTG 482158
Query 204983 CCGTTCTCCATCTGAGATCGCAGAATGTGGGTCCACAATTCGCGAGCCT----CCACTTG 205038
|| |||| |||| | ||||||| | ||||| | | |||| | || |
Sbjct 482159 CCTGTCTCGGTCTGGGCCTCCAGAATGGCGTACCACAGCTTCTGGGCCTTGATCGACGCG 482218
Query 205039 CTTC-ACGTACATCCCTTGAGACTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGT 205097
| | ||| | || ||| |||||| ||| |||||| ||| |||| || ||||
Sbjct 482219 CGGCCACGGCCCTC--TTG---CTCGTACTTTTCGTACAGGGCCTCAAACTCCTCGCCGT 482273
Query 205098 ACACGTCCATCAGCCCTGGACATTTTTTGGGACACATCAGAGACCA--CATCTGATCGTC 205155
| || ||| || || || | ||||| |||||||| | ||| || | | || ||
Sbjct 482274 AGCAATCAGCCAGGCCAGGGCACTCGTTGGGGCACATCAGGGTCCAGTCAGC-GTTCTTC 482332
Query 205156 TTTCACCCTCTCCATAAACAGGTCGCTGATCCACAG-GCCGTAAAACAGATCACGGGCCC 205214
| || | || ||| || || ||| |||||||| ||| ||| ||||| ||||| |
Sbjct 482333 TCG-ACACGCTTCATGAAGAGATCGGGAATCCACAGCGCCAGGAAA-AGATCGCGGGCGC 482390
Query 205215 TAATTCCGTCGTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCAATGTCGGCGTGCC 205274
|| | || | || ||||||| || ||| || | | | || |||||||
Sbjct 482391 GAACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAACACATCCGCGTGCC 482450
Query 205275 ACGGCTCTAACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGC 205334
||||||| | | | ||| | || || || | |||||| ||||||||||| || ||
Sbjct 482451 ACGGCTCCAGGTAAATGGCAAAGGCACCAGGGCGCTTGTTGCCACCCTGGTCGACGTAGC 482510
Query 205335 GAGTCATCGCGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGC 205394
| | | |||||| || |||||||| || | | |||||||| ||| ||||| ||||
Sbjct 482511 GGGCAGTGTTGTTGAACACACGCAGCATGGGAATGATACCGTTGGAGGTACCGTTTGTGC 482570
Query 205395 TGTTGATGGCCGAGCCTTCAGCCCTCA--CGTTGGAGATGGCCGCGCCAATCCCGCCAGA 205452
| ||| |||||| || | | || |||| || | || || || ||||
Sbjct 482571 CGGCAATGTACGAGCCAGTGGCACGAATGCGGTGGACATTG--AGACCGATACCACCAGC 482628
Query 205453 ACACTTGGCGATCTGGGCGC-ACTCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGT 205511
||||| |||| || | | ||||| ||||| ||| ||||| |||| || || |
Sbjct 482629 CATCTTGGAGATCATAGCACAAGTCTTG-AGAGTATCGTAAATGCCCTCGATCGAGTCTT 482687
Query 205512 CCGCCAGTGTC-ACCAGATAGCACGAAGCCAGCTTGGCAAAGTTGGTGCCCGCGTGGAAG 205570
|| || |||| ||||| |||| || | ||||| || | || ||||||| |||
Sbjct 482688 CCTTCA-TGTCAACCAGGAAGCAAGAGGACAGCTGAGCCTGGGGCGTACCCGCGTTGAAA 482746
Query 205571 AGCGTGGGGCTGGCGTGGCTGAAG 205594
|| ||||| ||||||| |||||
Sbjct 482747 AGAGTGGGCGAGGCGTGGGTGAAG 482770
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795154901816800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |