Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03-
01] 30 sequences; 29,634,442 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq19 253 3e-62
seq18 104 3e-17
seq14 89.7 6e-13
>seq19
Length=545716
Score = 253 bits (280), Expect = 3e-62
Identities = 905/1395 (65%), Gaps = 35/1395 (3%)
Strand=Plus/Minus
Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGA-AGATATTGATTCTGT 111670
|| ||| ||||| | ||||| || || |||| || || || ||| |||| |||
Sbjct 482862 CCCCAGCACATGATTATGCGTGTTGCTGTCGGCATTTGGGGTGACAGAG-TTGACCGTGT 482804
Query 111671 TTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730
| | ||||| ||| || ||||| | | |||| |||||| | || || || ||
Sbjct 482803 TATTGAGACGTACAACCTCATGTCTAGCAAGTTCTTCACCCACGCCTCGCCCACTCTTTT 482744
Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790
|||||| ||||| || | || ||||| ||| ||||| ||| | ||||| ||
Sbjct 482743 CAACGCGGGTACGCCCCAGGCTCAGCTGTCCTCTTGCTTCCTGGTTGACATGAAGGAAGA 482684
Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850
|| ||| | |||||||||| ||||||| ||||| ||||| ||| ||||||
Sbjct 482683 CTCGATCGAGGGCATTTACGATACTCTCAAGACTTGTGCTATGATCTCCAAGATGGCTGG 482624
Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTACA 111908
||||||||| | | |||| | | |||| | |||||| || || |||
Sbjct 482623 TGGTATCGGTCTCAATGTCCACCGCATTCGTGCCACT--GGCTCGTACATTGCCGGCACA 482566
Query 111909 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 111968
|| ||| || | ||||| ||||| ||||| || || || ||| ||| || |||||
Sbjct 482565 AACGGTACCTCCAACGGTATCATTCCCATGCTGCGTGTGTTCAACAACACTGCCCGCTAC 482506
Query 111969 GTAAACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCAC 112025
|| |||| | ||| ||| || | | || | || || ||||| ||||||
Sbjct 482505 GTCGACCAGGGTGGCAACAAGCGCCCTGGTGCCTTTGCCATTTACCTGGAGCCGTGGCAC 482446
Query 112026 GCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGC 112085
|||||| | | ||||||||||| |||| ||||| || | ||||||| || |
Sbjct 482445 GCGGATGTGTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGTTCGCGCC 482386
Query 112086 CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGT 112145
|||||||| ||| || || |||||||| ||||||||||||||| | || ||| |||
Sbjct 482385 CGCGATCTTTTCCTGGCGCTGTGGATTCCCGATCTCTTCATGAAGCGTGTCGAGAAGAAC 482326
Query 112146 GGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAG 112205
| | ||| | || | || || || || || || || | ||| | || |||
Sbjct 482325 GCTGACTGGACCCTGATGTGCCCCAACGAGTGCCCTGGCCTGGCTGATTGCTACGGCGAG 482266
Query 112206 GAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCG-GGCGACTGCGACGGTGCC 112264
|||||||| ||||| ||| |||||||||| |||| | || ||| | ||| || | |
Sbjct 482265 GAGTTTGAGGCCCTGTACGAAAAGTACGAGCAAGAGGGCCGTGGCCGC-GCGTCGAT-CA 482208
Query 112265 AGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATA 112323
|| | || | ||||| | || ||||| || | || |||||||| || | || | |
Sbjct 482207 AGGCCCAGAAGCTGTGGTACGCCATTCTGGAGGCCCAGACCGAGACAGGCAACCCGTTCA 482148
Query 112324 TGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGA 112383
|||| ||||| ||| ||| |||| ||||| || || ||||| ||||| ||| |
Sbjct 482147 TGCTGTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGTACCATCCGCA 482088
Query 112384 GTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTA 112443
| |||||||| || || || || | || | | |||||| || ||||| |
Sbjct 482087 GCTCCAACCTGTGCACTGAGATTATTGAGTACTGTGCGCCTGATGAGGTTGCCGTGTGCA 482028
Query 112444 ACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA-TCCAGAGACAAAGACATTTGATTAT 112502
|||| || || | ||||| || || ||| || | || | || || | || |
Sbjct 482027 ACCTGGCTTCGCTGGCTCTGCCGTCGTTTGTCGACTACAACAAGAACGA-GTACGACTTC 481969
Query 112503 GAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGA 112562
| || || ||||| || || || ||| ||||| ||| | | |||||
Sbjct 481968 CAGAAGCTGCACGAGGTCACCAAGGTTGTTGTGCGCAACCTGAACCGCATCATTGACGTC 481909
Query 112563 AATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGT 112619
|| |||||||| |||| || | || || ||| | |||||||| ||||||
Sbjct 481908 AACCACTACCCCGTGCCTGAG---GCCCACAACAGCAACATGCGTCACCGTCCCATTGGT 481852
Query 112620 CTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCA-----TTTGATT 112674
| ||||| || ||||| || |||| ||| || ||| |||| ||||| |
Sbjct 481851 GTTGGTGTTCAGGGTCTGGCTGATGCCTTC-----CTGGCGCTGCGCATGCCTTTTGAGT 481797
Query 112675 CCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTG 112734
| | ||| || | |||| | | || ||||| || || || ||||| || ||
Sbjct 481796 CTGCCGAGGCTCGCAAGCTCAACACTCAGATCTTTGAAACCATCTACCACGCTGCCCTGA 481737
Query 112735 AGG-CGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCA 112793
|| | | | | | ||| || ||| || ||| | || || | ||||||||| ||
Sbjct 481736 CGGCCTCGATGGAAATTGCCA-AGGAGGAGGGTACCTACTCTACGTATGAGGGTTCGCCC 481678
Query 112794 GCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCACTACGA 112852
| ||| || || | || || || || |||| |||| || | || ||| | || ||
Sbjct 481677 GTTTCTCAGGGCATCCTGCAGTTCGACATGT-GGAATGTCACGCCCAGCGACCTCTGGGA 481619
Query 112853 CTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGC 112912
||||| | |||||||| | |||||| |||| ||| | || ||| ||| || | ||
Sbjct 481618 CTGGGCGTCGCTCAAGGAGCAGATCAAGCAGAACGGTGTGCGCAACTCGCTTCTGCTTGC 481559
Query 112913 ACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTA 112972
|| ||||| || ||| ||| | || || |||| || || || |||||||| || ||
Sbjct 481558 GCCGATGCCGACGGCCAGCACGTCGCAGATTCTGGGCAACAACGAGTGCTTTGAGCCGTA 481499
Query 112973 CACGACGAACATCTA 112987
||| | ||||| ||
Sbjct 481498 CACTTCCAACATTTA 481484
>seq18
Length=564976
Score = 104 bits (114), Expect = 3e-17
Identities = 198/287 (69%), Gaps = 6/287 (2%)
Strand=Plus/Plus
Query 102048 CTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGC-AGCTCTTTGAAGCCATCCA 102106
||||| |||| || || ||||| ||| || | ||| | || || | |||||| |
Sbjct 230078 CTCATCGACACCTACATCAAGGAGCCTGCCCAGC-GCAGCTACCTGTTCAACGCCATCGA 230136
Query 102107 AACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTC 102166
|| |||| || |||| || || || |||||| | |||||| || | | | |
Sbjct 230137 CACCATTCCTTGCATTCGCCGCAAGGCCGACTGGGCTCTCAAGTGGATT--TCCGACCGC 230194
Query 102167 GCGTT--CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCT 102224
| || ||||||| |||| || | || ||||| || |||||||||||||||||
Sbjct 230195 GAGTCGACCTTTGCCCAGCGTCTGGTGGCCTTTGCCGCCGTCGAGGGTATCTTCTTCTCG 230254
Query 102225 GGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTC 102284
|| | ||| | | |||| ||||| ||||| ||||| ||||| ||||| |||
Sbjct 230255 GGCGCTTTCGCCTCCATTTTCTGGCTGCGCAAGCGTGGTCTGATGCCCGGTCTGACCTTT 230314
Query 102285 TCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331
||||||||||| || || ||||||||||| || ||| || |||||
Sbjct 230315 TCCAACGAGCTGATTTCGCGTGACGAGGGTCTGCACACCGACTTTGC 230361
>seq14
Length=642483
Score = 89.7 bits (98), Expect = 6e-13
Identities = 276/416 (66%), Gaps = 16/416 (4%)
Strand=Plus/Minus
Query 15884 ACGATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGC 15943
||||||||| ||||| || || | ||||| | || |||||||| | || ||||| |
Sbjct 233109 ACGATCAAAACGACCCGGACGCATCAGCGCCTTGTCCAGGATATCCGCACGGTTCGTGCC 233050
Query 15944 GGCGATGACAACAATACCTGTTTCGT--TATCAAAACCATCCATCTCTGTCAAAAGCTGG 16001
||| | || ||||| ||||| | | | || |||||||| || |||| | ||||
Sbjct 233049 GGCCAGCACGACAAT--CTGTTCGGCCGTGTTGAAGCCATCCATTTCCGTCAGGATCTGG 232992
Query 16002 TTAATAGTTTGTTCCCGTTCATCATT--CGCTGGC-ATACCA--CCAG-CACTGCGTTGC 16055
|| | || || || || || || ||| | | || | | || | | || |
Sbjct 232991 TTGAGCGTGGACTCGCGCTCGTCGTTGCCGCCGCCCATGCGGTTCGAGTCGGTACGCGAC 232932
Query 16056 TTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACT 16115
|| | |||||||||||| || || |||| |||||| || ||| | || ||
Sbjct 232931 CGGCCAATGGCATCAATCTCGTCGATAAAGATGATGCACGGCGCATTCTTACGCGCCGTG 232872
Query 16116 TCAAAGAGATCCCGTACACGCTTGGCG--CCCACACCAACAAACATCTCCACAAAGTTTG 16173
|||| | || || ||||| || || |||||||| ||||||||||| ||||| | |
Sbjct 232871 GCAAACAAGTCGCGCACACG--TGACGGACCCACACCGACAAACATCTCGACAAACTCGG 232814
Query 16174 CGGCGGA-ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 16232
| || || || | ||| || || || || ||||| |||| ||| || ||
Sbjct 232813 AGCCGCTGACGCTGAA-GAACGGCACGCCCGACTCGCCCGCCGTGGCCTTGGCCAGCAGC 232755
Query 16233 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288
||||| |||||||| || ||||| || | || || ||||| |||||||||||
Sbjct 232754 GTCTTTCCCGTACCGGGGGGACCCGACAGAATAGCGCCGCGTGGGATCTTGGCGCC 232699
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620742167221600
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