Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03-
01] 30 sequences; 29,634,442 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq19 230 3e-55
seq18 104 3e-17
>seq19
Length=545716
Score = 230 bits (254), Expect = 3e-55
Identities = 1146/1793 (64%), Gaps = 63/1793 (4%)
Strand=Plus/Plus
Query 105551 TCAAGACTGAACTGAATTGGGCGC-GCCTTTGCCTTAGATCGGAGATAGTACATCCCGGT 105609
|||| | |||||||||| |||||| || |||| | || || |||||||| || ||
Sbjct 481100 TCAACAGTGAACTGAAT-GGGCGCCGCAGCCGCCTGCGTACGCAGGTAGTACATGCCCGT 481158
Query 105610 CTTGAGTCCTTGTTTCCACGCGTACATA-TGCATAGAAGAGAGCTTGGACATCGTTGGAC 105668
|||||| || | ||||| || || | ||||| | | |||| |||||| ||
Sbjct 481159 CTTGAGACCCAGCTTCCA-GCCCGCAAAGTGCATGCTGGTAATCTTGCCCATCGTAGGGT 481217
Query 105669 TTTCCATGAAAAGATTCAT--ACTTTGACTCTGGTCAATGAAGCGACCACGTTGTGCCGC 105726
| |||| || || | ||| |||| |||| || ||| |||||| | || ||
Sbjct 481218 CCTTCATGTGAATGTTGAGCGACTGGGACT--GGTCGATAAAGGCACCACGATCAGCAGC 481275
Query 105727 CATATCAATGACATCCTTCATCTTG---ATTTCCCACACTGTGCGGTAGAGATTCTTGAT 105783
||| | | || || | || || |||||||| || ||| || ||||||
Sbjct 481276 CATCTGCA---CAACCGTACGCTGCGAAATCTCCCACACAGTCTTGTACAGCGCCTTGAT 481332
Query 105784 ATCATCTGGGATATCTGAGA-TATTTTGAATTGAACC---CCCCGCCTTGACCATGAGAT 105839
||| || || || ||| || | || || || || || | |||| ||| || | |
Sbjct 481333 ATCGTCGGGAATG-CTGGGAATGTTCTGGATAGATCCGTTCTCCGCAATGA---TGCGGT 481388
Query 105840 CCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACGAGATGCTTGTTGA 105899
|||||| | | ||||| ||||| | | | |||||| | || |||||
Sbjct 481389 TCTTCATGTTGTCCGACCACAGACCCAGGTCCACCAGATCACGCAGCAGCCAAGGGTTGA 481448
Query 105900 CAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAA 105959
||| | ||||| || || || | | | | || ||||| | ||||| || ||||
Sbjct 481449 CAACCTGGAACTCGCCAGCCAGCACACGACGCTGGTAAATGTTGGAAGTGTACGGCTCAA 481508
Query 105960 AGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAA 106019
|||| || || || |||| || || | ||| ||| || ||||| || || | || ||
Sbjct 481509 AGCACTCGTTGTTGCCCAGAATCTGCGACGTGCTGGCCGTCGGCATCGGCGCAAGCAGAA 481568
Query 106020 GACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGA 106079
| ||| || | ||| || | |||||| | |||||||| ||||||| || |
Sbjct 481569 GCGAGTTGCGCACACCGTTCTGCTTGATCTGCTCCTTGAGCGACGCCCAGTCCCAGAGGT 481628
Query 106080 -GCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCC 106138
||| || | || |||| |||| || || || || | || || || ||| ||||||
Sbjct 481629 CGCTGGGCGTGACATTCC-ACATGTCGAACTGCAGGATGCCCTGAGAAACGGGCGAACCC 481687
Query 106139 TCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCG-CCTCCAGGGATGC 106197
||| | || |||| ||| | | | || | ||| || | | || ||||| ||
Sbjct 481688 TCATACGTAGAGTAGGTACCCTCCTCCTTGGCAATTTC-CATCGAGGCCGTCAGGGCAGC 481746
Query 106198 GTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAA--- 106254
||| || |||||||||||||| ||| || | || || || | || |||||
Sbjct 481747 GTGGTAGATGGTTTCAAAGATCTGAGTGTTGAGCTTGCGAGCCTCGGCAGACTCAAAAGG 481806
Query 106255 --TGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGT 106312
|||| |||| || || |||| || ||||| |||||||| | |||||| ||
Sbjct 481807 CATGCGCAGCGCCAGGAAGG-----CATCAGCCAGACCCTGAACACCAACACCAATGGGA 481861
Query 106313 CTGTGTCGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATG 106369
| ||| ||||| || || | || |||| ||||| || || |||||||
Sbjct 481862 CGGTGACGCATGTTGCTGTTGTGGGC---CTCAGGCACGGGGTAGTGGTTGACGTCAATG 481918
Query 106370 ACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAA 106429
| ||||| || || ||||| ||| |||| || || || || | | || |
Sbjct 481919 ATGCGGTTCAGGTTGCGCACAACAACCTTGGTGACCTCGTGCAGCTTCTGGAAGTCGTAC 481978
Query 106430 GTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCC 106489
| | | | | |||| || || || || | || |||| ||||| || ||
Sbjct 481979 TCGTTCTTGTTGTAGTCGACAAACGACGGCAGAGCCAGCGAAGCCAGGTTGCACACGGCA 482038
Query 106490 GTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTC 106549
|||||| | |||||| | ||| || || |||| |||||| || || ||
Sbjct 482039 ACCTCATCAGGCGCACAGTACTCAATAATCTCAGTGCACAGGTTGGAGCTGCGGATGGTA 482098
Query 106550 CCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTC 106609
|||| ||||| ||||| ||||| |||||| |||||||| |||||| | || |
Sbjct 482099 CCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAGCATGAACGGGTTG 482158
Query 106610 CCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGC 106668
|| ||||| ||||| | || ||||| || | ||||| | || | | || | | | | |
Sbjct 482159 CCTGTCTCGGTCTGGGCCTCCAGAATGGCGTACCACAGCTTCTGGGCCTTGATCGACG-C 482217
Query 106669 GTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGC 106728
| | | || ||||| |||||||||| ||| ||||| ||||||||||| ||
Sbjct 482218 GCGGCCACGGCCCTCTTGCTCGTACTTTTCGTACAGGGCCTCAAACTCCTCGCCGTAGCA 482277
Query 106729 GTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAAC 106788
|| | || || || || || || || | || | ||| | | | || ||| ||
Sbjct 482278 ATCAGCCAGGCCAGGGCACTCGTTGGGGCACATCAGGGTCCAGTCAGCGTTCTTCTCGAC 482337
Query 106789 CCGCTTCATGAAAAGGTCTGGAATCCACAGGG--ATGAAAAGAGATCTCTACACCGAGCC 106846
||||||||||| || || ||||||||||| | | |||| ||||| | ||| ||
Sbjct 482338 ACGCTTCATGAAGAGATCGGGAATCCACAGCGCCAGGAAA--AGATCGCGGGCGCGAACC 482395
Query 106847 TCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGC 106906
|| || | || ||||| || | ||||||||||| | | |||||||||||| |||
Sbjct 482396 TCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAACACATCCGCGTGCCACGGC 482455
Query 106907 TCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATTTACATAGCGCGC 106962
|| || || | || | | || | | | | ||| | || | || ||||| ||
Sbjct 482456 TCCAGGTAAATGGCAAAGGCACCAGGGCGCTTGTTG-CCACCCTGGTCGACGTAGCGGGC 482514
Query 106963 TGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCG 107022
||| ||| || || || ||||| ||||| ||||| | || ||| ||||| ||
Sbjct 482515 AGTGTTGTTGAACACACGCAGCATGGGAATGATACCGTTGGAGGTACCGTTTGTGCCGGC 482574
Query 107023 AA--TACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCAC 107080
|| |||||| | |||| | | |||| | | || ||||| |||||| |
Sbjct 482575 AATGTACGAG--CCAGTGGCACGAATGCGGTGGACATTGAGACCGATACCACCAGCCATC 482632
Query 107081 TTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTG 107140
|| ||||| ||||| | | ||||| | || || || | ||| ||||| |||||
Sbjct 482633 TTGGAGATCATAGCACAAGTCTTGAGAGTATCGTAAATGCCCTCGATCGAGTCTTCCTTC 482692
Query 107141 TTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTT 107200
|| | | ||||||||| ||||| ||| | || ||||| || ||||| || ||
Sbjct 482693 ATGTCAACCAGGAAGCAAGAGGACAGCTGAGCCTGGGGCGTACCCGCGTTGAAAAGAGTG 482752
Query 107201 GGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCAAGACAGAAT 107258
|| | ||||| ||| | | |||| ||||| || ||| ||||| | ||| |
Sbjct 482753 GGCGAGGCGTGGGTGA--AGAACTTGCTAGACATGAGGTTGTACGTCTCAATAACACGGT 482810
Query 107259 CAATGTCT-TCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGGG 107310
||| ||| || || ||||||| || |||||||||| ||||| |||||
Sbjct 482811 CAA-CTCTGTCACCCCAAATGCCGACAGCAACACGCATAATCATGTGCTGGGG 482862
>seq18
Length=564976
Score = 104 bits (114), Expect = 3e-17
Identities = 524/821 (64%), Gaps = 33/821 (4%)
Strand=Plus/Minus
Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045
||||| ||||| |||||||| |||||||||||||| || | || ||||| |||||
Sbjct 230649 TAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTACCGCCCAGCGAGATGTTCTCCATG 230590
Query 117046 AAGTCAAATGGATTCTTCG--CGTT---CCAAATGGGTGGCACCC-CAACTTGTTTGAGG 117099
|||||||| || ||| | | || | || | | || || |||| ||
Sbjct 230589 AAGTCAAAGGGGTTCGTGGAGCGGTAGACCTTCTCGTTGCCAAGGGCAACC------AGC 230536
Query 117100 AGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGA 117159
||||| || | ||| |||||||||||| ||| || | |||||| || | ||
Sbjct 230535 AGACGGTCGGCGACAAACTCAATGTACTGCTTCATGAGGTCGGCGTTCATGCCAAGCAGG 230476
Query 117160 TTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATG 117219
|| || || || || | |||| | |||||||| |||| || || | | |||
Sbjct 230475 GCGCAAGGCAGAGCCTCGGTCAGGAACTCCTTCTCAATGACAACGGCATCGGTGATGATC 230416
Query 117220 GCGTGGATA-GTTTC--GGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCA 117276
| | | | | ||| | ||| | | | || || | ||||||| ||||
Sbjct 230415 TCCTCAACAAGCTTCTTGCTAGGGCGGGTGTT---CAGGTGCGAGAAGAGCAGGCAGGCA 230359
Query 117277 AACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGC 117336
|| || ||| |||||||| || || ||||| || || || || ||| || || |||
Sbjct 230358 AAGTCGGTGTGCAGACCCTCGTCACGCGAAATCAGCTCGTTGGAAAAGGTCAGACCGGGC 230299
Query 117337 ATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCC 117396
|| ||||| ||||| || ||| |||| | | ||| | || |||||||||||||||
Sbjct 230298 ATCAGACCACGCTTGCGCAGCCAGAAAATGGAGGCGAAAGCGCCCGAGAAGAAGATACCC 230239
Query 117397 TCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAACCA 117455
|| || ||||| || | || |||| ||| |||| ||| | || | || |||
Sbjct 230238 TCGACGGCGGCAAAGGCCACCAGACGCTGGGCAAAGG-TCGACTCGCGGTCGGAAATCCA 230180
Query 117456 TTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTT----CAA 117511
|| | ||||| | ||||| ||| || || | || | |||||| | ||
Sbjct 230179 CTTGAGAGCCCAGTCGGCCTTGCGGCGAATGCAAGGAATGGTGTCGATGGCGTTGAACAG 230120
Query 117512 ATAACTGCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTT 117571
|| |||| || ||| ||||| ||||| |||| || | || || || |
Sbjct 230119 GTAGCTGC-GCTGGGCAG---GCTCCTTGATGTAGGTGTCGATGAGCAGCGAGTACGTCT 230064
Query 117572 CGCCATGAACCAT-TTCATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATC 117630
| || | | | ||| ||| | || | ||||||| |||| || ||| |||
Sbjct 230063 CCGAGTGGATGTTCTCCATCATGATCTGGA-AGCCGTAGAAGCAGCGGGCCTCGGGGATC 230005
Query 117631 TGCACTTCATCCGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCA 117690
|| || ||| ||| ||| | | ||||| ||||| || || || ||||
Sbjct 230004 TGGACCTCACCCGAGAAACGCTCGACCAAGTTCTCGTTGACAATGCCGTCCGAAGCAGCG 229945
Query 117691 AAGAATGCCAGGATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTCCAG 117747
||||| ||||||| || | ||||| | |||||| | | |||| || | ||||||
Sbjct 229944 AAGAAGGCCAGGACGTGCGAGATGAAGTACTTTTCGTCCTTGTTCATGCGGTTGTTCCAG 229885
Query 117748 TCGTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 117788
|||| |||||| ||||||| ||||| || || || |||||
Sbjct 229884 TCGTGAAGATCCTTGGACAGATCAATCTCCTCGGCCGTCCA 229844
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589980578757200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |