Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03- 01] 30 sequences; 29,634,442 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq13 84.2 3e-11 >seq13 Length=737579 Score = 84.2 bits (92), Expect = 3e-11 Identities = 124/176 (70%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 159604 TGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCA 159663 ||| || ||||||| | ||||||||||||| || | || ||||| || | || || Sbjct 728387 TGTGAGCTTGTTCACGCCCATGGTGGTCAGGTCTACATGGACGGTGCCAACATGAACGCT 728446 Query 159664 CAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACAT 159723 ||| | ||||| | || | || ||| || || || || || || ||| | || Sbjct 728447 CAGATTGGTCTGACCTCGCCTGGCGAGATTGGCGCCGACGTGTGCCACCTGAACCTGCAC 728506 Query 159724 AAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 ||||| ||||| ||||| || || || || |||||||| || |||||||| |||| Sbjct 728507 AAGACTTTCTGCATTCCTCACGGTGGCGGTGGTCCTGGTGTTGGTCCTATCTGTGT 728562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588050979480800