Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03-
01] 30 sequences; 29,634,442 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq1 98.7 8e-16
>seq1
Length=4116995
Score = 98.7 bits (108), Expect = 8e-16
Identities = 199/294 (68%), Gaps = 6/294 (2%)
Strand=Plus/Plus
Query 29988 CACGTAAAACTG---ACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTT 30044
|||||| ||||| | ||||| || ||||| || || ||||| || |||
Sbjct 2530529 CACGTAGAACTGGGCAAACATG---TGACACGGCGGCAGCGCCATCTTCTTCAGGTCCGC 2530585
Query 30045 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCAC 30104
|| ||||| || | || |||||||| || || | ||| ||||| | | || |||
Sbjct 2530586 CGGATTCCACGCACTCATAATGATGCGTCTATCGTAGGGGGTGTTCTTCAGCTTGTGCAC 2530645
Query 30105 GGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTC 30164
| | | |||||| || || ||| |||| |||||||| | | || |||||
Sbjct 2530646 CACCTCTGCCAGCTGGTCGACACCCTGGCCCGTGTAGTCTGTCTGCGCATCGACATACTC 2530705
Query 30165 TGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTG 30224
||| || ||||||| |||||||||||||||||| || |||| ||| ||||| ||| |||
Sbjct 2530706 TGCGCCAAAATGCCGCCACTGGAACCCGTACACGGGGCCCAAGTCGCCCTCGGCCCGGTG 2530765
Query 30225 CTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTT 30278
| | |||| ||| || | | | || |||||| ||||||| |||||
Sbjct 2530766 GCCCAGGCCCACGCTGTTCAGGTACGCGCGCGACCCGTTGCCGTCCCATATCTT 2530819
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408617450599190
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |