Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03-
01] 30 sequences; 29,634,442 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq19 396 5e-105
seq18 205 2e-47
>seq19
Length=545716
Score = 396 bits (438), Expect = 5e-105
Identities = 924/1379 (67%), Gaps = 31/1379 (2%)
Strand=Plus/Plus
Query 212906 AGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTA 212965
||||||||| | |||||| || || | ||||| | | |||||||| ||| ||||||||
Sbjct 481441 AGGGTTGACAACCTGGAACTCGCCAGCCAGCACACGACGCTGGTAAATGTTGGAAGTGTA 481500
Query 212966 GGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGC 213025
||||| | || ||||||||| ||||||||||| | |||||||| || ||||| || ||
Sbjct 481501 CGGCTCAAAGCACTCGTTGTTGCCCAGAATCTGCGACGTGCTGGCCGTCGGCATCGGCGC 481560
Query 213026 CACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTC 213085
| ||| || ||| | ||| |||| || ||| | | ||| ||||||||
Sbjct 481561 AAGCAGAAGCGAGTTGCGCACACCGTTCTGCTTGATCTGCTCCTTGAGCGACGCCCAGTC 481620
Query 213086 CCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTT 213145
||| ||||| | | | || ||||||||||| ||||||| |||||| |
Sbjct 481621 CCAG---------AGGTCGCTGGGCGTGACATTCCACATGTCGAACTGCAGGATGCCCTG 481671
Query 213146 GCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGA 213205
||||| |||| || | ||||||| || | ||||||||| | || ||
Sbjct 481672 AGAAACGGGCGAACCCTCATACGTAGAGTAGGTACCCTCCTCCTTGGCAATTTCCATCGA 481731
Query 213206 CGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTC 213265
||| ||||||||||| ||||||||||||||| |||| |||||||||| |||||
Sbjct 481732 GGCCGTCAGGGCAGCGTGGTAGATGGTTTCAAAGATCTGAGTGTTGAGCTTGCGAGCCTC 481791
Query 213266 TGGGGACGTGAAGGGCATCATCATGCGTT-GGAACACATCAGCCAGCCCCTGGACCCCGA 213324
| ||| || ||||| || ||| |||| |||||||||| ||||| || || |
Sbjct 481792 GGCAGACTCAAAAGGCATGCGCA-GCGCCAGGAAGGCATCAGCCAGACCCTGAACACCAA 481850
Query 213325 TGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGC 213384
|| ||||| | ||| | || ||| ||| | ||| || |||||| ||||
Sbjct 481851 CACCAATGGGACGGTGACGCATGTTGCTGTTGTGGGCCTCAGGCACGGGGTAGTGGTTGA 481910
Query 213385 AGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGT 213444
||| ||||| ||| |||||||| | || |||||||| | | ||| | || |
Sbjct 481911 CGTCAATGATGCGGTTCAGGTTGCGCACAACAACCTTGGTGACCTCGTGCAGCTTCTGGA 481970
Query 213445 GATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGC 213504
| | || ||| || | |||||| ||||| || | ||||||||||
Sbjct 481971 AGTCGTACTCGTTCTTGTTGTAGTCGACAAACGACGGCAGAGCCAGCGAAGCCAGGTTGC 482030
Query 213505 AAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATC 213564
| ||||| ||||| | || | |||||| || ||||| |||||||||||| || |
Sbjct 482031 ACACGGCAACCTCATCAGGCGCACAGTACTCAATAATCTCAGTGCACAGGTTGGAGCTGC 482090
Query 213565 GGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAA-TCCTTGTAGAGCATG 213623
||||||| |||||||||| ||||| ||| ||| | |||| |||||||| ||||||
Sbjct 482091 GGATGGTACCCAGGTTCTTCTGGTTGCTCTT-GCGGTTGCAGTGGTCCTTGTACAGCATG 482149
Query 213624 TAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTG 213683
| ||| || ||||| ||||| | |||| || | ||| || | | |||||||
Sbjct 482150 AACGGGTTGCCTGTCTCGGTCTGGGCCTCCAGAATGGCGTACCACAGCTTCTGGGCCTTG 482209
Query 213684 ACC-ACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGCTCGTTGAATT 213741
| | || ||| || ||| | | |||||||| |||||| || | | || |
Sbjct 482210 ATCGACGCGCG-----GCCACGGCCCTCTTGCTCGTACTTTTCGTACAGGGCCTCAAACT 482264
Query 213742 CGTGGCCCCAG-ACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCC 213800
| | ||| || | | | |||| || || || ||| ||||| ||| |||||||
Sbjct 482265 CCTCGCCGTAGCAATCAG-CCAGGCCAGGGCACTCGTTGGGGCACATCAGGGTCCAGTCA 482323
Query 213801 CCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTC 213859
||| | |||| ||| | || |||||| || || || | ||||||||| ||| || ||
Sbjct 482324 GCGTTCTTCTC-GACACGCTTCATGAAGAGATCGGGAATCCACAGCGCCAGGAAAAGATC 482382
Query 213860 CCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTC 213919
| || | ||| ||| || ||| |||||||| || || || ||||| | ||
Sbjct 482383 GCGGGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAACACATC 482442
Query 213920 CGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTC 213976
||||||||||||||||| ||| ||||||||||| || | || | ||||| ||||||||
Sbjct 482443 CGCGTGCCACGGCTCCAGGTAAATGGCAAAGGCACCAGGGCGCTTGTTGCCACCCTGGTC 482502
Query 213977 CACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCC 214036
|| | ||| ||||||| | ||||| | ||| | | |||||||| ||
Sbjct 482503 GACGTAGCGGGCAGTGTTGTTGAACACACGCAGCATGGGAATGATACCGTTGGAGGTACC 482562
Query 214037 GTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCA--GGTTGCTCATGGAGAGCCCTATG 214094
||| || || || || |||||||| | ||| | | | || ||| |||| || ||
Sbjct 482563 GTTTGTGCCGGCAATGTACGAGCCAGTGGCACGAATGCGGTGGACATTGAGA--CCGATA 482620
Query 214095 CCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATG 214154
||||| || |||||||||||| || || | | | ||| || ||||| | ||
Sbjct 482621 CCACCAGCCATCTTGGAGATCATAGCACAAGTCTTGAGAGTATCGTAAATGCCCTCGATC 482680
Query 214155 CTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAG 214214
||| || | | || | || |||||| || ||||| | | || || || | |
Sbjct 482681 GAGTCTTCCTTCATGTCAACCAGGAAGCAAGAGGACAGCTGAGCCTGGGGCGTACCCGCG 482740
Query 214215 TTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTC 214273
|||||||| ||||| ||| ||| | | |||||| |||| | ||| |||| |||||
Sbjct 482741 TTGAAAAGAGTGGGCGAGGCGTGGGTGAAGAACTTGCTAGACATGAGGTTGTACGTCTC 482799
>seq18
Length=564976
Score = 205 bits (226), Expect = 2e-47
Identities = 493/739 (67%), Gaps = 23/739 (3%)
Strand=Plus/Minus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||||||||| || || | ||||| |||||||| ||||| || ||| ||||||||||||
Sbjct 230653 CTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTACCGCCCAGCGAGATGTTCTC 230594
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC----CGT-GTCAGGCCCATCTGTTCC 47953
||||||| |||||||| | | | || ||| ||| | || | || | |
Sbjct 230593 CATGAAGTCAAAGGGGTTCGTGGAGCGGTAGACCTTCTCGTTGCCAAGGGCAAC-----C 230539
Query 47954 AGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATG 48013
||||| | || ||||| |||| ||||| | ||||||| | ||||||||| |
Sbjct 230538 AGCAGACGGTCGGCGACAAACTCAATGTACTGCTTCATGAGGTCGGCGTTCATGCCAAGC 230479
Query 48014 AGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACA 48073
|||| |||| ||||| || || ||||||||||| || ||||| || |
Sbjct 230478 AGGGCGCAAGGCAGAGCCTCGGTCAGGAACTCCTTCTCAATGACAACGGCATCGGTGATG 230419
Query 48074 ATCTGCTTAACGCGGGACTCTG--AGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGC 48131
|||| || ||| | || || |||| || | ||||||| | |||||| ||
Sbjct 230418 ATCTCCTCAACAAGCTTCT-TGCTAGGGCGGGT-GTTCAGGTGCGAGA---AGAGCAGGC 230364
Query 48132 AGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGAC 48191
|||||||||| |||||| || ||||| || || ||| ||||||| ||| ||||
Sbjct 230363 AGGCAAAGTCGGTGTGCAGACCCTCGTCACGCGAAATCAGCTCGTTGGAAAAGGTCAGAC 230304
Query 48192 CAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGA 48251
| ||||| | || | || ||||||||||| | ||||||| ||| ||||||||||
Sbjct 230303 CGGGCATCAGACCACGCTTGCGCAGCCAGAAAATGGAGGCGAAAGCGCCCGAGAAGAAGA 230244
Query 48252 TGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGA 48311
| ||||| || || || || || || | || | || | | | ||| || |
Sbjct 230243 TACCCTCGACGGCGGCAAAGGCCACCAGACGCTGGGCAAAGGTCGACTCGCGGTCGGAAA 230184
Query 48312 TCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGA 48371
|||| || |||||||| ||||| ||||| || || || || ||||| ||
Sbjct 230183 TCCACTTGAGAGCCCAGTCGGCCTTGCGGCGAATGCAAGGAATGGTGTCGATGGCGTTGA 230124
Query 48372 AGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTACA 48428
| || | ||| || | | ||| | ||||| |||||||| | ||||
Sbjct 230123 ACAGGTAGCTGCGCTGGGCAGGCTCCTTGATGTAGGTGTCGATGAGCAGC---GAGTACG 230067
Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488
|||| ||||| | ||||| || ||||||||| ||||||||| | |||||| |
Sbjct 230066 TCTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGGGA 230007
Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548
||| || || ||||| | ||| | || ||||| ||||| || || || |||||||
Sbjct 230006 TCTGGACCTCACCCGAGAAACGCTCGACCAAGTTCTCGTTGACAATGCCGTCCGAAGCAG 229947
Query 48549 CAAAGAAGGCAAGGACATG 48567
| |||||||| ||||| ||
Sbjct 229946 CGAAGAAGGCCAGGACGTG 229928
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931532450675200
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