Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03- 01] 30 sequences; 29,634,442 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq19 208 9e-49 seq18 104 3e-17 seq14 102 1e-16 >seq19 Length=545716 Score = 208 bits (230), Expect = 9e-49 Identities = 899/1400 (64%), Gaps = 41/1400 (3%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGA-AGACATTGATTCTGT 75270 || ||| ||||| | ||||| || || ||||||| || || ||| |||| ||| Sbjct 482862 CCCCAGCACATGATTATGCGTGTTGCTGTCGGCATTTGGGGTGACAGAG-TTGACCGTGT 482804 Query 75271 CTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTC 75328 | ||||| ||| || ||||| |||| | | ||| ||||| | || || || Sbjct 482803 TATTGAGACGTACAACCTCATGTCTAGCAAGTTCT--TCACCCACGCCTCGCCCACTCTT 482746 Query 75329 TTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 75388 ||||| || ||||| || | ||| ||||| ||||||||| | | || ||||| Sbjct 482745 TTCAACGCGGGTACGCCCCAGGCTCAGCTGTCCTCTTGCTTCCTGGTTGACATGAAGGAA 482686 Query 75389 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 75448 ||||| ||| | || || || | ||||| | | ||||| ||||| ||| |||| Sbjct 482685 GACTCGATCGAGGGCATTTACGATACTCTCAAGACTTGTGCTATGATCTCCAAGATGGCT 482626 Query 75449 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA--TTCGGGGGA 75506 || ||||| || | | |||| | | |||| | |||||| || || | Sbjct 482625 GGTGGTATCGGTCTCAATGTCCACCGCATTCGTGCCACTGG--CTCGTACATTGCCGGCA 482568 Query 75507 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 75566 |||| ||| || | ||||| ||||| ||||| || || || ||| ||| || |||| Sbjct 482567 CAAACGGTACCTCCAACGGTATCATTCCCATGCTGCGTGTGTTCAACAACACTGCCCGCT 482508 Query 75567 ATGTAAATCAAGCGGGGCGTC----GCAAGGGGTCCATCGCGGTCTACTTGGAACCATGG 75622 | || | || | | ||| | || || || | || | ||| |||| || ||| Sbjct 482507 ACGTCGACCAGG-GTGGCAACAAGCGCCCTGGTGCCTTTGCCATTTACCTGGAGCCGTGG 482449 Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682 || || ||| | | ||||||||||| | || ||||| || | || |||| ||| Sbjct 482448 CACGCGGATGTGTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGTTCGC 482389 Query 75683 TGTAGAGATCTCTTTTCAT--CCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGG 75740 | ||||| |||| | | ||||||||||| || || ||||||||||| || ||| Sbjct 482388 GCCCGCGATCT--TTTCCTGGCGCTGTGGATTCCCGATCTCTTCATGAAGCGTGTCGAGA 482331 Query 75741 AGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGG 75800 || | | | ||| | || | || || || || || || || | || | Sbjct 482330 AGAACGCTGACTGGACCCTGATGTGCCCCAACGAGTGCCCTGGCCTGGCTGATTGCTACG 482271 Query 75801 GTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTG 75860 | ||||||||||| ||||| ||| |||||| || | ||||| | | | ||| | Sbjct 482270 GCGAGGAGTTTGAGGCCCTGTACGAAAAGTACGAGCAAGAGGGCCGTGGCCGCGCGTCGA 482211 Query 75861 TACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCA 75919 | | || | | || | | ||| | || ||||| | | ||||| ||||| || | || Sbjct 482210 T-CAAGGCCCAGAAGCTGTGGTACGCCATTCTGGAGGCCCAGACCGAGACAGGCAACCCG 482152 Query 75920 TATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATC 75979 | ||||| |||||||| || ||| ||||| ||||| ||||| |||| || ||| Sbjct 482151 TTCATGCTGTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGTACCATC 482092 Query 75980 AAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTT 76039 ||||| || || ||||| || ||| | |||||| | |||||| || || Sbjct 482091 CGCAGCTCCAACCTGTGCACTGAGATTATTGAGTACTGTGCGCCTGATGAGGTTGCCGTG 482032 Query 76040 TGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGAT 76099 ||||| |||| || | || || || || |||| | | | | | | || Sbjct 482031 TGCAACCTGGCTTCGCTGGCTCTGCCGTCGTTTGTCGACTACAACAAGAACGAGTACGAC 481972 Query 76100 TATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGAC 76159 | | || || || || |||| ||| ||||| || || ||||| |||||||| Sbjct 481971 TTCCAGAAGCTGCACGAGGTCACCAAGGTTGTTGTGCGCAACCTGAACCGCATCATTGAC 481912 Query 76160 AGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATT 76216 || || ||||| |||| | | | | || || ||||| ||| | || ||| Sbjct 481911 GTCAACCACTACCCCGTGCCTGAGGCC-CACAACAGC--AACATGCGTCACCGTCCCATT 481855 Query 76217 GGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCAT-----TTG 76271 ||| | |||||||| ||||| || |||| || | | |||| ||||| ||| Sbjct 481854 GGTGTTGGTGTTCAGGGTCTGGCTGATGCCTTCCT-----GGCGCTGCGCATGCCTTTTG 481800 Query 76272 ATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCC 76331 | || | || || || | || ||| |||||||||||||| || ||||| ||| Sbjct 481799 AGTCTGCCGAGGCTCGCAAGCTCAACACTCAGATCTTTGAAACCATCTACCACGCTGCCC 481740 Query 76332 TGGAGG-CGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCT 76390 || || | | || ||| | || | | | ||| |||| || | ||||||||| Sbjct 481739 TGACGGCCTCGATG-GAAATTGCCAAGGAGGAGGGTACCTACTCTACGTATGAGGGTTCG 481681 Query 76391 CCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGC-TCAACTA 76449 |||| || || || | || ||||| || |||| |||| || | || ||| | || Sbjct 481680 CCCGTTTCTCAGGGCATCCTGCAGTTCGACATGT-GGAATGTCACGCCCAGCGACCTCTG 481622 Query 76450 CGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGAT 76509 ||||||| |||||||| | |||||| |||| ||| | || ||| ||| || | Sbjct 481621 GGACTGGGCGTCGCTCAAGGAGCAGATCAAGCAGAACGGTGTGCGCAACTCGCTTCTGCT 481562 Query 76510 GGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 76569 || || ||||| || ||| ||| | || || |||| || || || |||||||| || Sbjct 481561 TGCGCCGATGCCGACGGCCAGCACGTCGCAGATTCTGGGCAACAACGAGTGCTTTGAGCC 481502 Query 76570 ATACACAACAAACATCTACC 76589 ||||| | ||||| |||| Sbjct 481501 GTACACTTCCAACATTTACC 481482 >seq18 Length=564976 Score = 104 bits (114), Expect = 3e-17 Identities = 524/821 (64%), Gaps = 33/821 (4%) Strand=Plus/Plus Query 64714 TGGACTGCGGAAGAAGTTGATTTGTCCAAAGATCTTGACGACTGGAAGACCC---TGAAT 64770 ||||| || || || ||||| ||||||| |||||| |||||||||| | || |||| Sbjct 229844 TGGACGGCCGAGGAGATTGATCTGTCCAAGGATCTTCACGACTGGAACAACCGCATGAAC 229903 Query 64771 GAAAATGAAAAGAAATTCATAAAGTACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 64830 | | |||||| | ||||| | || ||||||| ||||| |||| || || || ||| Sbjct 229904 AAGGACGAAAAGTACTTCATCTCGCACGTCCTGGCCTTCTTCGCTGCTTCGGACGGCATT 229963 Query 64831 GTTTTTGAGAATATCAATAACAATTTTGCGGATGAAGTGCAGATAAGCGAAGCGCGCTCA 64890 || ||||| | | ||| ||| ||| || ||||| ||| || |||| Sbjct 229964 GTCAACGAGAACTTGGTCGAGCGTTTCTCGGGTGAGGTCCAGATCCCCGAGGCCCGCTGC 230023 Query 64891 TTCTACGCATATCAATGCCATAATGAA-ATGGTTCATGGCGAAACATATTCAAAATTGAT 64949 ||||||| | || | ||| ||| | | | || || || || || | || Sbjct 230024 TTCTACGGCT-TCCAGATCATGATGGAGAACATCCACTCGGAGACGTACTCGCTGCTCAT 230082 Query 64950 TGACAAATACATTAAGGATGGATCTGAAAAGAAGCAGTTATTTG----AAGCCATCCAAA 65005 |||| ||||| ||||| ||| || |||| || || | |||||| | | Sbjct 230083 CGACACCTACATCAAGGAGC---CTGCCCAGC-GCAGCTACCTGTTCAACGCCATCGACA 230138 Query 65006 CTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTCT 65064 | | || || ||| ||||| | ||||| | || ||| || | || | | Sbjct 230139 CCATTCCTTGCATTCGCCGCAAGGCCGACTGGGCTCTCAAGTGGATTTCCGACCGCGAGT 230198 Query 65065 CGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGG 65124 || |||| ||| |||| || | || ||||| || ||||||||||||||||| || Sbjct 230199 CGA-CCTTTGCCCAGCGTCTGGTGGCCTTTGCCGCCGTCGAGGGTATCTTCTTCTCGGGC 230257 Query 65125 TCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCA 65184 | ||| | | |||| ||| || ||||| ||||| ||||| || || ||| || Sbjct 230258 GCTTTCGCCTCCATTTTCTGGCTGCGCAAGCGTGGTCTGATGCCCGGTCTGACCTTTTCC 230317 Query 65185 AATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAG 65244 || || || ||||| || || |||||||| ||| || |||||| ||||||| | Sbjct 230318 AACGAGCTGATTTCGCGTGACGAGGGTCTGCACACCGACTTTGCCTGCCTGCTCTTCTCG 230377 Query 65245 ACTTTGCGTAATAGACCCACTACC--GAAAC-TATCCACGCCATCGTGAAAGAGGCGGTT 65301 || || | | | ||| | ||| | | | | | ||| | | || || ||| Sbjct 230378 CACCTG---AACACCCGCCCTAGCAAGAAGCTTGTTGAGGAGATCATCACCGATGCCGTT 230434 Query 65302 GAGATTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCT 65361 | |||||||| | |||| | || || || || || || | || |||||| | Sbjct 230435 GTCATTGAGAAGGAGTTCCTGACCGAGGCTCTGCCTTGCGCCCTGCTTGGCATGAACGCC 230494 Query 65362 GAGAAGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTG-GGGT 65420 || ||| |||||||||||| ||| | || ||||| || |||| | Sbjct 230495 GACCTCATGAAGCAGTACATTGAGTTTGTCGCCGACCGTCTGCT------GGTTGCCCTT 230548 Query 65421 GCCACCCATTTGG---AACG--CGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTT 65475 | || | | || | || | | ||| || |||||||| ||||| ||||| || Sbjct 230549 GGCAACGAGAAGGTCTACCGCTCCACGAACCCCTTTGACTTCATGGAGAACATCTCGCTG 230608 Query 65476 GATGGGAAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516 | || |||||||||||||| |||||||| ||||| ||||| Sbjct 230609 GGCGGTAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTA 230649 >seq14 Length=642483 Score = 102 bits (112), Expect = 1e-16 Identities = 304/458 (66%), Gaps = 12/458 (3%) Strand=Plus/Plus Query 175231 GAGATTGTGGATTTTCTCAAGCAACCCGAGAGATATTTTGGAAGTGGTGCCAAGATCCCC 175290 ||| ||||| | || |||||| | ||||| | | | | | || ||||||||||| Sbjct 232654 GAGTTTGTGCAGTTCCTCAAGAAGCCCGAAAAGTTTGTGCGCCTGGGCGCCAAGATCCCA 232713 Query 175291 CGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATC 175350 || ||||| |||| ||||| || |||||||||||||| || || ||| |||| Sbjct 232714 CGCGGCGCTATTCTGTCGGGTCCCCCCGGTACGGGAAAGACGCTGCTGGCCAAGGCCACG 232773 Query 175351 GCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGC--CGCAAACTTTGTGGAGATGT 175408 ||||| || || || || ||| | ||| | || || | | | ||||| ||||||| Sbjct 232774 GCGGGCGAGTCGGGCGTGCCGTTC-TTCAGCG-TCAGCGGCTCCGAGTTTGTCGAGATGT 232831 Query 175409 TTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAAC 175468 |||| ||||||||| | | | || ||||| | |||| | || || | ||| | Sbjct 232832 TTGTCGGTGTGGGTCCGTCACGTGTGCGCGACTTGTTTGCCACGGCGCGTAAGAATGCGC 232891 Query 175469 CATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAGCAACGCAGCG-CTGG--TG 175525 | || || |||| || || ||||||||||| | ||| | || | || || | Sbjct 232892 CGTGCATCATCTTTATCGACGAGATTGATGCCATTGGCCGGTCGCGTACCGACTCGAACC 232951 Query 175526 GTAT-GCCAGC--AAATGACGAGAGAGAACAAACAATTAATCAACTACTCACCGAGATGG 175582 | || | | || || |||||| | || || | || || | || || || |||| Sbjct 232952 GCATGGGCGGCGGCAACGACGAGCGCGAGTCCACGCTCAACCAGATCCTGACGGAAATGG 233011 Query 175583 ATGGCTTTGACAATG-AGACTGGCATTGTGGTTATTGCGGCCACTAATCGCGTGGATATC 175641 ||||||| ||| | || | ||||| || | || | ||| || || | ||||||| Sbjct 233012 ATGGCTTCAACACGGCCGAACAG-ATTGTCGTGCTGGCCGGCACGAACCGTGCGGATATC 233070 Query 175642 CTTGATGACGCCCTCCTTCGCCCGGGTCGTTTTGATCG 175679 || || | || || | || ||||||||||||||||| Sbjct 233071 CTGGACAAGGCGCTGATGCGTCCGGGTCGTTTTGATCG 233108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569376286400