Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03-
01] 30 sequences; 29,634,442 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq19 208 9e-49
seq18 104 3e-17
seq14 102 1e-16
>seq19
Length=545716
Score = 208 bits (230), Expect = 9e-49
Identities = 899/1400 (64%), Gaps = 41/1400 (3%)
Strand=Plus/Minus
Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGA-AGACATTGATTCTGT 75270
|| ||| ||||| | ||||| || || ||||||| || || ||| |||| |||
Sbjct 482862 CCCCAGCACATGATTATGCGTGTTGCTGTCGGCATTTGGGGTGACAGAG-TTGACCGTGT 482804
Query 75271 CTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTC 75328
| ||||| ||| || ||||| |||| | | ||| ||||| | || || ||
Sbjct 482803 TATTGAGACGTACAACCTCATGTCTAGCAAGTTCT--TCACCCACGCCTCGCCCACTCTT 482746
Query 75329 TTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 75388
||||| || ||||| || | ||| ||||| ||||||||| | | || |||||
Sbjct 482745 TTCAACGCGGGTACGCCCCAGGCTCAGCTGTCCTCTTGCTTCCTGGTTGACATGAAGGAA 482686
Query 75389 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 75448
||||| ||| | || || || | ||||| | | ||||| ||||| ||| ||||
Sbjct 482685 GACTCGATCGAGGGCATTTACGATACTCTCAAGACTTGTGCTATGATCTCCAAGATGGCT 482626
Query 75449 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA--TTCGGGGGA 75506
|| ||||| || | | |||| | | |||| | |||||| || || |
Sbjct 482625 GGTGGTATCGGTCTCAATGTCCACCGCATTCGTGCCACTGG--CTCGTACATTGCCGGCA 482568
Query 75507 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 75566
|||| ||| || | ||||| ||||| ||||| || || || ||| ||| || ||||
Sbjct 482567 CAAACGGTACCTCCAACGGTATCATTCCCATGCTGCGTGTGTTCAACAACACTGCCCGCT 482508
Query 75567 ATGTAAATCAAGCGGGGCGTC----GCAAGGGGTCCATCGCGGTCTACTTGGAACCATGG 75622
| || | || | | ||| | || || || | || | ||| |||| || |||
Sbjct 482507 ACGTCGACCAGG-GTGGCAACAAGCGCCCTGGTGCCTTTGCCATTTACCTGGAGCCGTGG 482449
Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682
|| || ||| | | ||||||||||| | || ||||| || | || |||| |||
Sbjct 482448 CACGCGGATGTGTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGTTCGC 482389
Query 75683 TGTAGAGATCTCTTTTCAT--CCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGG 75740
| ||||| |||| | | ||||||||||| || || ||||||||||| || |||
Sbjct 482388 GCCCGCGATCT--TTTCCTGGCGCTGTGGATTCCCGATCTCTTCATGAAGCGTGTCGAGA 482331
Query 75741 AGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGG 75800
|| | | | ||| | || | || || || || || || || | || |
Sbjct 482330 AGAACGCTGACTGGACCCTGATGTGCCCCAACGAGTGCCCTGGCCTGGCTGATTGCTACG 482271
Query 75801 GTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTG 75860
| ||||||||||| ||||| ||| |||||| || | ||||| | | | ||| |
Sbjct 482270 GCGAGGAGTTTGAGGCCCTGTACGAAAAGTACGAGCAAGAGGGCCGTGGCCGCGCGTCGA 482211
Query 75861 TACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCA 75919
| | || | | || | | ||| | || ||||| | | ||||| ||||| || | ||
Sbjct 482210 T-CAAGGCCCAGAAGCTGTGGTACGCCATTCTGGAGGCCCAGACCGAGACAGGCAACCCG 482152
Query 75920 TATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATC 75979
| ||||| |||||||| || ||| ||||| ||||| ||||| |||| || |||
Sbjct 482151 TTCATGCTGTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGTACCATC 482092
Query 75980 AAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTT 76039
||||| || || ||||| || ||| | |||||| | |||||| || ||
Sbjct 482091 CGCAGCTCCAACCTGTGCACTGAGATTATTGAGTACTGTGCGCCTGATGAGGTTGCCGTG 482032
Query 76040 TGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGAT 76099
||||| |||| || | || || || || |||| | | | | | | ||
Sbjct 482031 TGCAACCTGGCTTCGCTGGCTCTGCCGTCGTTTGTCGACTACAACAAGAACGAGTACGAC 481972
Query 76100 TATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGAC 76159
| | || || || || |||| ||| ||||| || || ||||| ||||||||
Sbjct 481971 TTCCAGAAGCTGCACGAGGTCACCAAGGTTGTTGTGCGCAACCTGAACCGCATCATTGAC 481912
Query 76160 AGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATT 76216
|| || ||||| |||| | | | | || || ||||| ||| | || |||
Sbjct 481911 GTCAACCACTACCCCGTGCCTGAGGCC-CACAACAGC--AACATGCGTCACCGTCCCATT 481855
Query 76217 GGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCAT-----TTG 76271
||| | |||||||| ||||| || |||| || | | |||| ||||| |||
Sbjct 481854 GGTGTTGGTGTTCAGGGTCTGGCTGATGCCTTCCT-----GGCGCTGCGCATGCCTTTTG 481800
Query 76272 ATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCC 76331
| || | || || || | || ||| |||||||||||||| || ||||| |||
Sbjct 481799 AGTCTGCCGAGGCTCGCAAGCTCAACACTCAGATCTTTGAAACCATCTACCACGCTGCCC 481740
Query 76332 TGGAGG-CGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCT 76390
|| || | | || ||| | || | | | ||| |||| || | |||||||||
Sbjct 481739 TGACGGCCTCGATG-GAAATTGCCAAGGAGGAGGGTACCTACTCTACGTATGAGGGTTCG 481681
Query 76391 CCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGC-TCAACTA 76449
|||| || || || | || ||||| || |||| |||| || | || ||| | ||
Sbjct 481680 CCCGTTTCTCAGGGCATCCTGCAGTTCGACATGT-GGAATGTCACGCCCAGCGACCTCTG 481622
Query 76450 CGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGAT 76509
||||||| |||||||| | |||||| |||| ||| | || ||| ||| || |
Sbjct 481621 GGACTGGGCGTCGCTCAAGGAGCAGATCAAGCAGAACGGTGTGCGCAACTCGCTTCTGCT 481562
Query 76510 GGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 76569
|| || ||||| || ||| ||| | || || |||| || || || |||||||| ||
Sbjct 481561 TGCGCCGATGCCGACGGCCAGCACGTCGCAGATTCTGGGCAACAACGAGTGCTTTGAGCC 481502
Query 76570 ATACACAACAAACATCTACC 76589
||||| | ||||| ||||
Sbjct 481501 GTACACTTCCAACATTTACC 481482
>seq18
Length=564976
Score = 104 bits (114), Expect = 3e-17
Identities = 524/821 (64%), Gaps = 33/821 (4%)
Strand=Plus/Plus
Query 64714 TGGACTGCGGAAGAAGTTGATTTGTCCAAAGATCTTGACGACTGGAAGACCC---TGAAT 64770
||||| || || || ||||| ||||||| |||||| |||||||||| | || ||||
Sbjct 229844 TGGACGGCCGAGGAGATTGATCTGTCCAAGGATCTTCACGACTGGAACAACCGCATGAAC 229903
Query 64771 GAAAATGAAAAGAAATTCATAAAGTACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 64830
| | |||||| | ||||| | || ||||||| ||||| |||| || || || |||
Sbjct 229904 AAGGACGAAAAGTACTTCATCTCGCACGTCCTGGCCTTCTTCGCTGCTTCGGACGGCATT 229963
Query 64831 GTTTTTGAGAATATCAATAACAATTTTGCGGATGAAGTGCAGATAAGCGAAGCGCGCTCA 64890
|| ||||| | | ||| ||| ||| || ||||| ||| || ||||
Sbjct 229964 GTCAACGAGAACTTGGTCGAGCGTTTCTCGGGTGAGGTCCAGATCCCCGAGGCCCGCTGC 230023
Query 64891 TTCTACGCATATCAATGCCATAATGAA-ATGGTTCATGGCGAAACATATTCAAAATTGAT 64949
||||||| | || | ||| ||| | | | || || || || || | ||
Sbjct 230024 TTCTACGGCT-TCCAGATCATGATGGAGAACATCCACTCGGAGACGTACTCGCTGCTCAT 230082
Query 64950 TGACAAATACATTAAGGATGGATCTGAAAAGAAGCAGTTATTTG----AAGCCATCCAAA 65005
|||| ||||| ||||| ||| || |||| || || | |||||| | |
Sbjct 230083 CGACACCTACATCAAGGAGC---CTGCCCAGC-GCAGCTACCTGTTCAACGCCATCGACA 230138
Query 65006 CTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTCT 65064
| | || || ||| ||||| | ||||| | || ||| || | || | |
Sbjct 230139 CCATTCCTTGCATTCGCCGCAAGGCCGACTGGGCTCTCAAGTGGATTTCCGACCGCGAGT 230198
Query 65065 CGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGG 65124
|| |||| ||| |||| || | || ||||| || ||||||||||||||||| ||
Sbjct 230199 CGA-CCTTTGCCCAGCGTCTGGTGGCCTTTGCCGCCGTCGAGGGTATCTTCTTCTCGGGC 230257
Query 65125 TCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCA 65184
| ||| | | |||| ||| || ||||| ||||| ||||| || || ||| ||
Sbjct 230258 GCTTTCGCCTCCATTTTCTGGCTGCGCAAGCGTGGTCTGATGCCCGGTCTGACCTTTTCC 230317
Query 65185 AATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAG 65244
|| || || ||||| || || |||||||| ||| || |||||| ||||||| |
Sbjct 230318 AACGAGCTGATTTCGCGTGACGAGGGTCTGCACACCGACTTTGCCTGCCTGCTCTTCTCG 230377
Query 65245 ACTTTGCGTAATAGACCCACTACC--GAAAC-TATCCACGCCATCGTGAAAGAGGCGGTT 65301
|| || | | | ||| | ||| | | | | | ||| | | || || |||
Sbjct 230378 CACCTG---AACACCCGCCCTAGCAAGAAGCTTGTTGAGGAGATCATCACCGATGCCGTT 230434
Query 65302 GAGATTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCT 65361
| |||||||| | |||| | || || || || || || | || |||||| |
Sbjct 230435 GTCATTGAGAAGGAGTTCCTGACCGAGGCTCTGCCTTGCGCCCTGCTTGGCATGAACGCC 230494
Query 65362 GAGAAGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTG-GGGT 65420
|| ||| |||||||||||| ||| | || ||||| || |||| |
Sbjct 230495 GACCTCATGAAGCAGTACATTGAGTTTGTCGCCGACCGTCTGCT------GGTTGCCCTT 230548
Query 65421 GCCACCCATTTGG---AACG--CGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTT 65475
| || | | || | || | | ||| || |||||||| ||||| ||||| ||
Sbjct 230549 GGCAACGAGAAGGTCTACCGCTCCACGAACCCCTTTGACTTCATGGAGAACATCTCGCTG 230608
Query 65476 GATGGGAAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516
| || |||||||||||||| |||||||| ||||| |||||
Sbjct 230609 GGCGGTAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTA 230649
>seq14
Length=642483
Score = 102 bits (112), Expect = 1e-16
Identities = 304/458 (66%), Gaps = 12/458 (3%)
Strand=Plus/Plus
Query 175231 GAGATTGTGGATTTTCTCAAGCAACCCGAGAGATATTTTGGAAGTGGTGCCAAGATCCCC 175290
||| ||||| | || |||||| | ||||| | | | | | || |||||||||||
Sbjct 232654 GAGTTTGTGCAGTTCCTCAAGAAGCCCGAAAAGTTTGTGCGCCTGGGCGCCAAGATCCCA 232713
Query 175291 CGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATC 175350
|| ||||| |||| ||||| || |||||||||||||| || || ||| ||||
Sbjct 232714 CGCGGCGCTATTCTGTCGGGTCCCCCCGGTACGGGAAAGACGCTGCTGGCCAAGGCCACG 232773
Query 175351 GCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGC--CGCAAACTTTGTGGAGATGT 175408
||||| || || || || ||| | ||| | || || | | | ||||| |||||||
Sbjct 232774 GCGGGCGAGTCGGGCGTGCCGTTC-TTCAGCG-TCAGCGGCTCCGAGTTTGTCGAGATGT 232831
Query 175409 TTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAAC 175468
|||| ||||||||| | | | || ||||| | |||| | || || | ||| |
Sbjct 232832 TTGTCGGTGTGGGTCCGTCACGTGTGCGCGACTTGTTTGCCACGGCGCGTAAGAATGCGC 232891
Query 175469 CATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAGCAACGCAGCG-CTGG--TG 175525
| || || |||| || || ||||||||||| | ||| | || | || || |
Sbjct 232892 CGTGCATCATCTTTATCGACGAGATTGATGCCATTGGCCGGTCGCGTACCGACTCGAACC 232951
Query 175526 GTAT-GCCAGC--AAATGACGAGAGAGAACAAACAATTAATCAACTACTCACCGAGATGG 175582
| || | | || || |||||| | || || | || || | || || || ||||
Sbjct 232952 GCATGGGCGGCGGCAACGACGAGCGCGAGTCCACGCTCAACCAGATCCTGACGGAAATGG 233011
Query 175583 ATGGCTTTGACAATG-AGACTGGCATTGTGGTTATTGCGGCCACTAATCGCGTGGATATC 175641
||||||| ||| | || | ||||| || | || | ||| || || | |||||||
Sbjct 233012 ATGGCTTCAACACGGCCGAACAG-ATTGTCGTGCTGGCCGGCACGAACCGTGCGGATATC 233070
Query 175642 CTTGATGACGCCCTCCTTCGCCCGGGTCGTTTTGATCG 175679
|| || | || || | || |||||||||||||||||
Sbjct 233071 CTGGACAAGGCGCTGATGCGTCCGGGTCGTTTTGATCG 233108
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596569376286400
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