Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03-
01] 30 sequences; 29,634,442 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq19 192 5e-44
seq6 118 1e-21
seq16 86.0 6e-12
>seq19
Length=545716
Score = 192 bits (212), Expect = 5e-44
Identities = 822/1287 (64%), Gaps = 28/1287 (2%)
Strand=Plus/Plus
Query 138358 ATCTCCCACACGGTCTTGTATAGATCACGAATAT-GTCGCGGTATTGTTGCAATATTTTG 138416
||||||||||| |||||||| || | |||| |||| || || | | ||| || ||
Sbjct 481301 ATCTCCCACACAGTCTTGTACAGCGCCTTGATATCGTCG-GGAATGCTGGGAATGTTCTG 481359
Query 138417 AATGCTCCCGTTGGCCGCAATGATGCGATTTCTCATGTCATCGTTGTACAGATTCAACTT 138476
|| ||||| ||||||||||||| || |||||| || ||||| || |
Sbjct 481360 GATAGATCCGTTCTCCGCAATGATGCGGTTCTTCATGTTGTCCGACCACAGACCCAGGTC 481419
Query 138477 GATCAAGTCGTTTATCAGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCGACG 138536
| || || | ||| | ||| | ||||| || || || |||| || |||||
Sbjct 481420 CACCAGATCACGCAGCAGCCAAGGGTTGACAACCTGGAACTCGCCAGCCAGCACACGACG 481479
Query 138537 AACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGT 138596
|||||||||| ||| | |||||||| | |||||||| ||||||||||| | |||
Sbjct 481480 CTGGTAAATGTTGGAAGTGTACGGCTCAAAGCACTCGTTGTTGCCCAGAATCTGCGACGT 481539
Query 138597 GGTCGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCG 138656
| | || |||||||| ||| | || ||| || || || | ||||| ||||||| |
Sbjct 481540 GCTGGCCGTCGGCATCGGCGCAAGCAGAAGCGAGTTGCGCACACCGTTCTGCTTGATCTG 481599
Query 138657 TTCCTTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACTG 138716
||||||||||||| ||||||||| | ||||| || | |||||||| ||| ||||
Sbjct 481600 CTCCTTGAGCGACGCCCAGTCCCAGAGGTCGCTGGGCGTGACATTCCACATGTCGAACTG 481659
Query 138717 TAACATTCCCAAACTTGCGGGACTGCCTTCGTACGAATCGTATACACCAAACTCTTGCGC 138776
| || ||| | |||| || || |||| | ||| ||| ||| | ||
Sbjct 481660 CAGGATGCCCTGAGAAACGGGCGAACCCTCATACGTAGAGTAGGTACCCTCCTCCTTGGC 481719
Query 138777 CAACTCGTTGCTCGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAG 138836
| || | ||| || ||| | | ||| || ||||| ||||| |||||
Sbjct 481720 AATTTCCATCGAGGCCGTCAGGGCAGCGTGGTAGATGGTTTCAAAGATCTGAGTGTTGAG 481779
Query 138837 CAATCGGGCCTCGGCGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCC 138896
| || |||||||| ||| | |||||||| ||| | ||| || || ||||| ||
Sbjct 481780 CTTGCGAGCCTCGGCAGACTCAAAAGGCATGCGCAGCGCCAGGAAGGCATCAGCCAGACC 481839
Query 138897 TTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTG-CGGCTTC---GA 138952
|| || || || || | || || || |||| || ||| ||| ||| || |
Sbjct 481840 CTGAACACCAACACCAATGGGACGGTGACGCA----TGTTGCTGTTGTGGGCCTCAGGCA 481895
Query 138953 TAGGATAATAGTTTACATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAGTCGTAT 139012
|| || | ||| || || ||||| ||| | || ||||| || ||||| || |
Sbjct 481896 CGGGGTAGTGGTTGACGTCAATGATGCGGTTCAGGTTGCGCACAACAACCTTGGT-GACC 481954
Query 139013 GCTTTAATCGT-TCAAAATCGTATGTGCCCCCGTTGTCGTCGAC-GACGTCGACAAATTT 139070
| | | | | | || ||||| | | ||||| |||||| ||| || || |
Sbjct 481955 TCGTGCAGCTTCTGGAAGTCGTACTCGTTCTTGTTGTAGTCGACAAACGACGGCAGA--- 482011
Query 139071 GTTGACACAAATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGAC 139130
| | | ||| || | ||||||||| || || || || || | | ||| || |
Sbjct 482012 ---GCC----AGCGAAGCCAGGTTGCACACGGCAACCTCATCAGGCGCACAGTACTCAAT 482064
Query 139131 AATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCG 139190
||| || | |||| || | ||| ||||| | || | || ||||| || ||
Sbjct 482065 AATCTCAGTGCACAGGTTGGAGCTGCGGATGGTACCCAGGTTCTTCTGGTTGCTCTTGCG 482124
Query 139191 GTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAAT 139250
||| || || ||||| ||||| |||| |||| || || || | ||| | |||
Sbjct 482125 GTTGCAGTGGTCCTTGTACAGCATGAACGGGTTGCCTGTCTCGGTCTGGGCCTCCAGAAT 482184
Query 139251 GAATTTGAACAAGTCCCTAGCTTGTATTTGACGCAC-GTAAAGTTCGTCGCGCTCGTACT 139309
| | ||| | | || | | | ||||| | | | | | || |||||||||
Sbjct 482185 GGCGTACCACAGCTTCTGGGCCT-TGATCGACGCGCGGCCACGGCCCTCTTGCTCGTACT 482243
Query 139310 TTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAG 139369
||||||| || | || || || |||||| |||| || | | |||| || |
Sbjct 482244 TTTCGTACAGGGCCTCAAACTCCTCGCCGTAGCAATCAGCCAGGCCAGGGCACTCGTTGG 482303
Query 139370 GACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCC 139429
| ||||| || | ||| | ||||| || ||| ||| ||||||| ||||| |||||||
Sbjct 482304 GGCACATCAGGGTCCAGTCAGCGTTCTTCTCGACACGCTTCATGAAGAGATCGGGAATCC 482363
Query 139430 ACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTCATGT 139489
||| || | | | |||||| || || ||| || ||| || ||
Sbjct 482364 ACAGCGCCAGGAAAAGATCGCGGGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGCAGGT 482423
Query 139490 TAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCC 139549
|||||| ||||| || || |||||||| || ||||| || ||||| | || || |
Sbjct 482424 CAAGGAACTCAAACACATCCGCGTGCCACGGCTCCAGGTAAATGGCAAAGGCACCAGGGC 482483
Query 139550 G---TTTGCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCT 139606
| |||||||| || ||||||| || ||| || ||||| || |||| ||| ||
Sbjct 482484 GCTTGTTGCCACCCTGGTCGACGTAGCGGGCAGTGTTGTTGAACACACGCAGCATGGGAA 482543
Query 139607 CCAGACCGCTCGCTGTTCCGTTGGTGC 139633
| |||| | | || ||||| ||||
Sbjct 482544 TGATACCGTTGGAGGTACCGTTTGTGC 482570
>seq6
Length=1902109
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || ||||| || || || || || ||||| || || ||| | |
Sbjct 700970 ATGCAGATCTTTGTGAAGACGCTGACTGGCAAGACCATCACGCTAGAGGTCGAATCGTCG 701029
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||| || ||||| || || || ||||| || ||
Sbjct 701030 GACACGATTGACAATGTCAAGTCGAAGATTCAGGACAAGGAGGGTATTCCTCCGGACCAG 701089
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| |||||||||| || || |||||||||||| | | | || ||||| |||
Sbjct 701090 CAGCGTCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGTACGCTTTCCGATTACAAC 701149
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || ||||| ||||| || || |||| |||| |||| || |||
Sbjct 701150 ATCCAGAAGGAGTCGACTCTGCATCTGGTTCTGCGCCTGCGTGGTGGC 701197
Score = 89.7 bits (98), Expect = 5e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || ||||| || ||||| || || || || || | |
Sbjct 700742 ATGCAGATCTTTGTCAAGACTCTTACCGGAAAGACTATCACCCTTGAGGTGGAGTCATCG 700801
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || |||||||| ||||| || || || ||||| || ||
Sbjct 700802 GATACCATTGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAG 700861
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| |||| || ||||| || ||||| |||||| | | | || || || |||
Sbjct 700862 CAGCGTCTGATTTTCGCCGGCAAGCAGCTTGAGGATGGTCGCACTCTTTCCGACTACAAC 700921
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912
|| || ||||| || || || || ||||
Sbjct 700922 ATCCAGAAGGAGTCTACTCTGCATCTGGT 700950
Score = 87.8 bits (96), Expect = 2e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| || | || || || || ||||| || ||||| ||||| || || || |
Sbjct 107427 GATGCAGATTTTCGTCAAGACCCTGACGGGTAAGACGATTACCCTCGAGGTTGAGTCCTC 107486
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || || ||||| ||||| || || || || || |||||
Sbjct 107487 GGACACTATCGACAATGTCAAGTCCAAAATCCAGGACAAGGAGGGCATTCCCCCGGATCA 107546
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| || ||||||| || || || |||||||||||| | | |||| || || ||
Sbjct 107547 GCAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACTCTGTCCGACTACAA 107606
Query 24883 CATTCAAAAGG 24893
||| || ||||
Sbjct 107607 CATCCAGAAGG 107617
Score = 82.4 bits (90), Expect = 7e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787
|| || || || || ||||| || || ||| | ||||||| | || | || ||
Sbjct 700253 ACGGGCAAGACCATCACGCTAGAGGTCGAATCTTCCGACACCATCGACAACGTCAAGTCC 700312
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
|||||||| ||||| || || || ||||| || || |||||| | || || || || ||
Sbjct 700313 AAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAGCAACGTCTCATTTTCGCTGGTAAG 700372
Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907
|||||||||||| | | | || || || ||||| || ||||| || || || |||
Sbjct 700373 CAGCTGGAGGATGGTCGTACTCTTTCCGACTACAACATCCAGAAGGAGTCCACCCTCCAC 700432
Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930
| || |||| |||| || ||
Sbjct 700433 CTAGTCCTGCGTCTGCGTGGTGG 700455
>seq16
Length=638914
Score = 86.0 bits (94), Expect = 6e-12
Identities = 124/175 (71%), Gaps = 0/175 (0%)
Strand=Plus/Plus
Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778
|| || || || ||||| || ||||| || || || || || | ||||| | || |
Sbjct 520758 AAGACCCTGACGGGTAAGACCATTACCCTGGAGGTCGAGTCCTCGGACACGATCGACAAC 520817
Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838
|| || |||||||| ||||| || || || || || || || || ||| |||||||
Sbjct 520818 GTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTGATCTTC 520877
Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGG 24893
|| || || |||||||||||| | | | |||| || || |||||||| ||||
Sbjct 520878 GCTGGCAAGCAGCTGGAGGATGGCCGCACCCTGTCCGACTACAACATTCAGAAGG 520932
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449897431288400
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