Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03- 01] 30 sequences; 29,634,442 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq1 123 2e-23 >seq1 Length=4116995 Score = 123 bits (136), Expect = 2e-23 Identities = 214/311 (69%), Gaps = 0/311 (0%) Strand=Plus/Plus Query 34321 GTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGG 34380 ||||| ||||| | || | | |||| ||||||||| ||||| || | | || Sbjct 3704399 GTCTCGGGGTTCTTGCACTTCTTGCACAGAACAAACTTGACAATGAAGCCGTAGACGTGG 3704458 Query 34381 TCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCG 34440 ||||| | ||| || ||||| || ||||||| ||| | || |||| || Sbjct 3704459 TCCTGCAGCTTCTTGGTATCGTGCGAACCGTTGATGATCCAGCGGTCGTCAGCAGGGTCA 3704518 Query 34441 ACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGT 34500 | | || || || |||||||| | ||||||||||| || ||| | ||||| Sbjct 3704519 ATGTTGGTCTGGGCACCCAGCTCAAAACCGAAGTACTTGATCAGGTGGGCACCGGGACGA 3704578 Query 34501 CCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTT 34560 | |||| || ||||| | | || |||||||| |||||||||||| ||||| ||||| Sbjct 3704579 GCCAGCGACTGGGCGACGGCCGACAGGTTGACGACGACAGTCTTGATACCGTTACCCTTG 3704638 Query 34561 CCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATTG 34620 ||||||| ||||| | ||| ||||| ||||| ||||||||| ||| | | || | Sbjct 3704639 CCTTCGATCTTGGTCTGAAGGCGGGGCATCTTGTACCGGTAGAACTGGTCGGTGATATCG 3704698 Query 34621 CGGTTAACGTT 34631 |||||||||| Sbjct 3704699 GGGTTAACGTT 3704709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412841449054790