Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03-
01] 30 sequences; 29,634,442 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq19 123 3e-23
seq6 122 9e-23
seq16 100 3e-16
>seq19
Length=545716
Score = 123 bits (136), Expect = 3e-23
Identities = 544/850 (64%), Gaps = 11/850 (1%)
Strand=Plus/Minus
Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGA-AGACATTGACGCCGCCTT 7622
|| |||||| | |||| || || || |||||| || || ||| ||||| | |
Sbjct 482859 CAGCACATGATTATGCGTGTTGCTGTCGGCATTTGGGGTGACAGAG-TTGACCGTGTTAT 482801
Query 7623 GGAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGC 7682
|| |||||| | | |||||| || || || ||||| |||||||| | ||
Sbjct 482800 TGAGACGTACAACCTCATGTCTAGCAAGTTCTTCACCCACGCCTCGCCCACTCTTTTCAA 482741
Query 7683 CGCGGGCACAAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAG 7742
|||||| || | | |||| ||||||| || || || | |||| ||||||
Sbjct 482740 CGCGGGTACGCCCCAGGCTCAGCTGTCCTCTTGCTTCCTGGTTGACATGAAGGAAGACTC 482681
Query 7743 CATCGACGGCATTTACAACACGCTGCGCGA-TTGCGCCAATATTTCCAAATACGGC-GGC 7800
||||| ||||||||| | || || | || ||| || | || ||||| | ||| ||
Sbjct 482680 GATCGAGGGCATTTACGATACTCT-CAAGACTTGTGCTATGATCTCCAAG-ATGGCTGGT 482623
Query 7801 GGAATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAAC 7860
|| || ||||| || || || | | || |||| || ||| | ||| |||
Sbjct 482622 GGTATCGGTCTCAATGTCCACCGCATTCGTGCCACTGGCTCGTACATTGCCGGCACAAAC 482563
Query 7861 GGAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTA 7920
|| | ||| |||| | |||||| |||| |||||||| ||| | | || | ||
Sbjct 482562 GGTACCTCCAACGGTATCATTCCCATGCTGCGTGTGTTCAACAACACTGCCCGCTACGTC 482503
Query 7921 GACCAGGGGGGAAA---GCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCG 7977
|||||||| || || |||| || ||| |||||| || |||||||||||||||||
Sbjct 482502 GACCAGGGTGGCAACAAGCGCCCTGGTGCCTTTGCCATTTACCTGGAGCCGTGGCACGCG 482443
Query 7978 GACATTTACGCAGTGCTAAATCTGCGTCGCAACATGGGTTGCGAAGACAGCAAAGCGCGC 8037
|| | | | | || | ||||| ||| || || || || |||
Sbjct 482442 GATGTGTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGTTCGCGCCCGC 482383
Query 8038 GATCTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGTTCATTTCGACGCA 8097
||||| ||| | | ||||| | |||||||| || |||| ||| || | ||||
Sbjct 482382 GATCTTTTCCTGGCGCTGTGGATTCCCGATCTCTTCATGAAGCGTGTCGAGAAGAACGCT 482323
Query 8098 CAATGGTCGCTCATGTGCCCCGATCGTTGCCCTTTATTAAAAAACGTTTACGGTTCAAAA 8157
| ||| | || ||||||||| | |||||| | | ||||| |
Sbjct 482322 GACTGGACCCTGATGTGCCCCAACGAGTGCCCTGGCCTGGCTGATTGCTACGGCGAGGAG 482263
Query 8158 TTTGAACAATTGTACAAACAATACGAACACGACGGC-GCGTACGTGCGGCAAGTGAAAGC 8216
||||| ||||| || | ||||| || || ||| | | || ||| | | | || ||
Sbjct 482262 TTTGAGGCCCTGTACGAAAAGTACGAGCAAGAGGGCCGTGGCCGCGCGTCGA-TCAAGGC 482204
Query 8217 GCGCGACCTGCACCGCGCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCT 8276
| | ||| ||||||| | || || | ||| || || | |||| ||||||
Sbjct 482203 CCAGAAGCTGTGGTACGCCATTCTGGAGGCCCAGACCGAGACAGGCAACCCGTTCATGCT 482144
Query 8277 GTACAAAGACGCTTGCAACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAG 8336
|||||| ||| |||||| ||| ||||| || | ||| |||| ||||| | ||
Sbjct 482143 GTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGTACCATCCGCAGCTC 482084
Query 8337 CAATCTGTGCGCTGAAATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTTTGCAATCT 8396
||| |||||| |||| ||| | ||||| | ||||| || || || ||||| ||||| ||
Sbjct 482083 CAACCTGTGCACTGAGATTATTGAGTACTGTGCGCCTGATGAGGTTGCCGTGTGCAACCT 482024
Query 8397 AGCGTCGGTG 8406
|| ||| ||
Sbjct 482023 GGCTTCGCTG 482014
>seq6
Length=1902109
Score = 122 bits (134), Expect = 9e-23
Identities = 157/217 (72%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | ||| ||||| || || || ||||| || ||||||||||| |
Sbjct 700740 CCACCACGGAGACGAAGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAA 700681
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| || || || ||||| ||||| || ||||||| ||||||||| || || ||
Sbjct 700680 AGAGTGCGACCATCCTCAAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCCGGAGGA 700621
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || || ||||| || ||||| ||| | || || ||||| || ||
Sbjct 700620 ATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTATCCGACGACTCGACT 700561
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703
|||||||||||||| || ||||| | || || ||||
Sbjct 700560 TCGAGAGTAATGGTCTTGCCGGTGAGGGTCTTGACGA 700524
Score = 107 bits (118), Expect = 2e-18
Identities = 140/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583
|||| || |||||||||||| | ||| | || || ||||| ||||| || || |
Sbjct 107617 CCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGA 107558
Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643
||| ||||||||||| || || ||||| || || || || ||||| ||||| ||
Sbjct 107557 TCAGGCGCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATTTTGGACTTGACATTGT 107498
Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703
| | ||||| || || || || ||||| ||||| || ||||| || | || || ||||
Sbjct 107497 CGATAGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTCAGGGTCTTGACGA 107438
Query 134704 AAATTTGCATTTTG 134717
|||| ||||| |||
Sbjct 107437 AAATCTGCATCTTG 107424
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | || || || || || || ||||| || |||||||||||| |
Sbjct 700968 CCACCACGGAGGCGGAGAACCAGATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAA 700909
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| || || || ||||| ||||| || ||||||| ||||||||| || || ||
Sbjct 700908 AGAGTGCGACCATCCTCAAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCCGGAGGA 700849
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || || || || ||||| ||| | || || || || |||||
Sbjct 700848 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCAATGGTATCCGATGACTCCACC 700789
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || || || ||||| | ||| || || || || |||||
Sbjct 700788 TCAAGGGTGATAGTCTTTCCGGTAAGAGTCTTGACAAAGATCTGCAT 700742
Score = 93.3 bits (102), Expect = 4e-14
Identities = 137/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| |||| || ||||| || ||||| ||||| || |||||||||||| || || ||
Sbjct 700446 AGACGCAGGACTAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTACGA 700387
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| || ||||| || || || ||||| | ||| ||||| || || || || || ||
Sbjct 700386 CCATCCTCCAGCTGCTTACCAGCGAAAATGAGACGTTGCTGGTCCGGAGGAATACCCTCC 700327
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || || || || ||||| ||| | |||||||| ||||| || || || ||
Sbjct 700326 TTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGATTCGACCTCTAGCGTG 700267
Query 134676 ATGGTTTTACCGGT 134689
||||| || || ||
Sbjct 700266 ATGGTCTTGCCCGT 700253
>seq16
Length=638914
Score = 100 bits (110), Expect = 3e-16
Identities = 135/188 (72%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583
|||| ||||||||||||||| | |||| | || || ||||| ||||| || || |
Sbjct 520932 CCTTCTGAATGTTGTAGTCGGACAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGA 520873
Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643
||| ||||||||| || || || ||||| || || || || || || ||||| ||
Sbjct 520872 TCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGT 520813
Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703
| | ||||| || || || || || || |||||||| ||||| || | || || ||||
Sbjct 520812 CGATCGTGTCCGAGGACTCGACCTCCAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 520753
Query 134704 AAATTTGC 134711
|| | |||
Sbjct 520752 AACTGTGC 520745
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505398210475600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |