Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03-
01] 30 sequences; 29,634,442 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq19 125 1e-23
>seq19
Length=545716
Score = 125 bits (138), Expect = 1e-23
Identities = 424/658 (64%), Gaps = 2/658 (0%)
Strand=Plus/Plus
Query 69537 ATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAAC 69596
|||| ||| ||||| || || || || ||||||| | ||| || | | | || ||
Sbjct 482278 ATCAGCCAGGCCAGGGCACTCGTTGGGGCACATCAGGGTCCAGTCAGCGTTCTTCTCGAC 482337
Query 69597 TCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTC 69656
|| ||||| || |||||||||||||| || || | || ||||| | || | | ||
Sbjct 482338 ACGCTTCATGAAGAGATCGGGAATCCACAGCGCCAGGAAAAGATCGCGGGCGCGAACCTC 482397
Query 69657 TTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTC 69716
|| || || || || || || || ||||| | | ||| | ||||| || ||
Sbjct 482398 CTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAACACATCCGCGTGCCACGGCTC 482457
Query 69717 TAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGT 69776
|| || || || | | | || || || || || || ||||| || | ||| | ||||||
Sbjct 482458 CAGGTAAATGGCAAAGGCACCAGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGGGCAGT 482517
Query 69777 GTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAAT 69836
||| || | || | |||||| ||||| ||||| || || |||| ||||| || | |||
Sbjct 482518 GTTGTTGAACACACGCAGCATGGGAATGATACCGTTGGAGGTACCGTTTGTGCCGGCAAT 482577
Query 69837 ATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGA 69896
|| || | || ||||| | | ||||| || || || ||||| || ||
Sbjct 482578 GTACGAGCCAGTGGCACGAATGCGGTGGACATTGAGACCGATACCACCAGCCATCTTGGA 482637
Query 69897 GATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTT 69956
||| | ||||||| || | || || || || ||||| || || || ||||||
Sbjct 482638 GATCATAGCACAAGTCTTGAGAGTATCGTAAATGCCCTCGATCGAGTCTTCCTTCATGTC 482697
Query 69957 AAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGA 70016
|| || || || |||| ||| || || ||||| || || | || || ||
Sbjct 482698 AACCAGGAAGCAAGAGGACAGCTGAGCCTGGGGCGTACCCGCGTTGAAAAGAGTGGGCGA 482757
Query 70017 TGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTA-TAT 70075
||||| ||||| | || ||| | || ||||| || |||||| | || | | |
Sbjct 482758 GGCGTGGGTGAAGAACTTGCTAGACATGAGGTTGTACGTCTCAATAACACGGTCAACTCT 482817
Query 70076 CCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTT 70135
||| ||| || | || |||||||| | ||| ||||| || || || || | |
Sbjct 482818 GTCAC-CCCAAATGCCGACAGCAACACGCATAATCATGTGCTGGGGACGCTCGACAATCT 482876
Query 70136 TATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTA 70193
| | | |||| |||||| || ||||| || || || ||||| || | |||
Sbjct 482877 TGCCGTCGAGCTTCAGCAGGTACGAACGCTCCAGGGTCTTGAAGCCAAAGTACTGGTA 482934
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686908542409200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |