Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03-
01] 30 sequences; 29,634,442 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq19 268 1e-66
seq18 150 2e-31
>seq19
Length=545716
Score = 268 bits (296), Expect = 1e-66
Identities = 1181/1848 (64%), Gaps = 55/1848 (3%)
Strand=Plus/Plus
Query 117805 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 117864
||||||||||||| ||| |||| | || ||||||||||| ||||||||||| |
Sbjct 481107 TGAACTGAATGGGCGCCGCAGCCGCCTGCGTACGCAGGTAGTACATGCCCGTCTTGAGAC 481166
Query 117865 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGA 117924
|| |||||||| | | ||||| || | |||| | || || | ||||
Sbjct 481167 CCAGCTTCCAGCCCGCAAAGTGCATGCTGGTAATCTTGCCCATCGTAGGGTCCTTCATGT 481226
Query 117925 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCA 117984
| ||| | ||||| || ||||| ||| || ||||| || ||||| | ||
Sbjct 481227 GAATGTTGAGCGACTGGGACTGGTCGATAAAGGCACCACGATCAGCAGCCATCTG---CA 481283
Query 117985 CATCCTTCATCTTG---ATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGA 118041
|| || | || || |||||||||||| |||| || ||| ||||| || ||||
Sbjct 481284 CAACCGTACGCTGCGAAATCTCCCACACAGTCTTGTACAGCGCCTTGATATCGTC-GGGA 481342
Query 118042 TATCCACG--ATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTT 118099
|| | | || || ||||| ||||| | || | ||| | | |||||| | |
Sbjct 481343 -ATGCTGGGAATGTTCTGGATAGATCCGTTCTCCGCAATGATGCGGTTCTTCATGTTGTC 481401
Query 118100 TGACCAGAGACCAATCTTTTTGAGATCCTCCACG-AGATGCTTA---TTGACAACAACAA 118155
||||| ||||| | | ||||| ||| || || | |||||||| |
Sbjct 481402 CGACCACAGACCCAGGTCCACCAGATC----ACGCAGCAGCCAAGGGTTGACAACCTGGA 481457
Query 118156 ACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCAT 118215
|||| || || || || | | | || || |||| ||||| |||||||||||||| |
Sbjct 481458 ACTCGCCAGCCAGCACACGACGCTGGTAAATGTTGGAAGTGTACGGCTCAAAGCACTCGT 481517
Query 118216 TGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTAC 118275
|||| |||| || || | ||| ||| || ||||| || || | ||||| ||| |
Sbjct 481518 TGTTGCCCAGAATCTGCGACGTGCTGGCCGTCGGCATCGGCGCAAGCAGAAGCGAGTTGC 481577
Query 118276 GGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCT 118335
| | ||| || | | | || | |||||||| | ||||||| || | | | |
Sbjct 481578 GCACACCGTTCTGCTTGATCTGCTCCTTGAGCGACGCCCAGTCCCAGAGGTCGCTGGGCG 481637
Query 118336 CCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCT 118395
| | |||||| || ||||| ||||| || || || | ||||| |||||| | ||
Sbjct 481638 TGACATTCCACATGTCGAACTGCAGGATGCCCTGAGAAACGGGCGAACCCTCATACGTAG 481697
Query 118396 CATATGGGCCCTCAACCTCCGCCAATTCG---GAGCTCGCCTCGAGGGCTGCGTGATACA 118452
|| | ||||| ||| || | ||| ||| || | ||||| ||||| || |
Sbjct 481698 AGTAGGTACCCTCCTCCTTGGCAATTTCCATCGAGGCCGTC---AGGGCAGCGTGGTAGA 481754
Query 118453 TTGTTTCAAAAATGCGAGCATTCA--TTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCG 118510
| |||||||| || ||| || | |||| |||||| | || ||||| | | ||
Sbjct 481755 TGGTTTCAAAGATCTGAGTGTTGAGCTTGCGA--GCCTCGGCAGACTCAAAAGGCATGCG 481812
Query 118511 GCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCAT 118570
| | || |||| || ||||| || ||||| | ||||| || || || | |||
Sbjct 481813 CAGCGCCAGGAAGGCATCAGCCAGACCCTGAACACCAACACCAATGGGACGGTGACGCAT 481872
Query 118571 ATTAGACTTCCGAGCGGTCTC---CACGGGATAAAAATTCCTATCGATAACCCTATTTAG 118627
|| || | || ||| |||||| || || || || | | || ||
Sbjct 481873 GTTGCTGTTGTGGGC---CTCAGGCACGGGGTAGTGGTTGACGTCAATGATGCGGTTCAG 481929
Query 118628 ATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTC 118687
|| |||||||| |||| || || ||||| | | | || | | | |
Sbjct 481930 GTTGCGCACAACAACCTTGGTGACCTCGTGCAGCTTCTGGAAGTCGTACTCGTTCTTGTT 481989
Query 118688 TTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTT 118747
| | |||| || || || || | || ||||| || ||||| | ||||||
Sbjct 481990 GTAGTCGACAAACGACGGCAGAGCCAGCGAAGCCAGGTTGCACACGGCAACCTCATCAGG 482049
Query 118748 ATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTT 118807
|| |||||| ||||| || ||||||| ||| || || ||||| |||| ||||||
Sbjct 482050 CGCACAGTACTCAATAATCTCAGTGCACAGGTTGGAGCTGCGGATGGTACCCAGGTTCTT 482109
Query 118808 TTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGT 118867
|| || ||| ||| || |||||||| |||||| | || | || ||||| ||
Sbjct 482110 CTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAGCATGAACGGGTTGCCTGTCTCGGT 482169
Query 118868 TTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCC 118926
|||| || ||||| || | ||| | | || | || | | | ||| | | || |
Sbjct 482170 CTGGGCCTCCAGAATGGCGTACCACAGCTTCTGGGCCTTGATC-GACGCGCGGCCACGGC 482228
Query 118927 CCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCC 118986
|||||| |||||||||| ||| ||||| |||||||| || || | || | || |
Sbjct 482229 CCTCTTGCTCGTACTTTTCGTACAGGGCCTCAAACTCCTCGCCGTAGCAATCAGCCAGGC 482288
Query 118987 CTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGA 119046
| || || | ||||| | || | ||| | | | || ||| || ||||||||||
Sbjct 482289 CAGGGCACTCGTTGGGGCACATCAGGGTCCAGTCAGCGTTCTTCTCGACACGCTTCATGA 482348
Query 119047 AGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCT 119106
|||| || || ||||| |||||| ||| ||||| || |||| | || || | || |
Sbjct 482349 AGAGATCGGGAATCCACAGCGCCAGGAAAAGATCGCGGGCGCGAACCTCCTCCTTGCCGT 482408
Query 119107 GATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCG 119166
| || |||| || | || || | | ||||||||||||||| |||||||| | |
Sbjct 482409 GGTTCTTGCGCAGGTCAAGGAACTCAAACACATCCGCGTGCCACGGCTCCAGGTAAATGG 482468
Query 119167 CGATTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAA 119220
| | | || | | || ||| |||||| || || | |||||| ||| |
Sbjct 482469 CAAAGGCACC---AGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGGGCAGTGTTGTTGA 482525
Query 119221 ATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAA--TACGAGA 119278
| ||||| ||||| ||||||||||| | ||| || ||||| || || ||||||
Sbjct 482526 ACACACGCAGCATGGGAATGATACCGTTGGAGGTACCGTTTGTGCCGGCAATGTACGAGC 482585
Query 119279 CTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTG 119338
| | |||| | | ||||| | | ||| ||||| || ||| ||| |||||
Sbjct 482586 C--AGTGGCACGAATGCGGTGGACATTGAGACCGATACCACCAGCCATCTTGGAGATCAT 482643
Query 119339 CGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAG 119398
|| || | ||||| | |||| || || ||||||||||| |||| | | | ||
Sbjct 482644 AGCACAAGTCTTGAGAGTATCGTAAATGCCCTCGATCGAGTCTTCCTTCATGTCAACCAG 482703
Query 119399 GAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTG 119458
|||||| |||| |||| | ||| ||||| |||||||| ||||| || | |||||
Sbjct 482704 GAAGCAAGAGGACAGCTGAGCCTGGGGCGTACCCGCGTTGAAAAGAGTGGGCGAGGCGTG 482763
Query 119459 GATGAACATACCTTG--GGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCT-TC 119515
| ||| | | |||| ||||| || ||| |||| ||| | ||| | ||| ||
Sbjct 482764 GGTGA--AGAACTTGCTAGACATGAGGTTGTACGTCT-CAATAACACGGTCAACTCTGTC 482820
Query 119516 CCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACC 119575
|| ||| |||| | || ||||||| ||||| ||||| || | | | ||
Sbjct 482821 ACCCCAAATGCCGACAGCAACACGCATAATCATGTGCTGGGGACGCTCGACAATCTTGCC 482880
Query 119576 ATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATA 119623
|||||| || | ||||| ||||| |||||||| ||||| ||
Sbjct 482881 GTCGAGCTTCAGCAGGTACGAACGCTCCAGGGTCTTGAAGCCAAAGTA 482928
>seq18
Length=564976
Score = 150 bits (166), Expect = 2e-31
Identities = 524/809 (65%), Gaps = 9/809 (1%)
Strand=Plus/Minus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787
||||| ||||| ||||||||||||||||| ||||| ||| ||| ||| ||||||||
Sbjct 230649 TAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTACCGCCCAGCGAGATGTTCTCCATG 230590
Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAATCTGTTTGAGGAGACG 129846
|| ||||| |||||| | ||| | | | || | |||| || |||||
Sbjct 230589 AAGTCAAAGGGGTTCGTGGAGCGGTAGACCTTCTCGTTG-CCAAGGGCAACCAGCAGACG 230531
Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906
|| | ||| |||||||||||| ||| |||| |||||| || | ||| ||
Sbjct 230530 GTCGGCGACAAACTCAATGTACTGCTTCATGAGGTCGGCGTTCATGCCAAGCAGGGCGCA 230471
Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966
|| || || || | |||| ||||||||||| | || || || | ||| | |
Sbjct 230470 AGGCAGAGCCTCGGTCAGGAACTCCTTCTCAATGACAACGGCATCGGTGATGATCTCCTC 230411
Query 129967 AATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTCCTG 130026
|| || | ||| ||| | || || | |||||| |||||| ||
Sbjct 230410 AACAAGCTTCTTGCTAGGGCGGGTGTTCAGGTGCGAGAAGAGCAGGCAGGCAAAGTCGGT 230351
Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086
||| |||||||||||||| || || || || || || ||| |||||| ||||| |||||
Sbjct 230350 GTGCAGACCCTCGTCACGCGAAATCAGCTCGTTGGAAAAGGTCAGACCGGGCATCAGACC 230291
Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146
||||| || ||||||||| | || | ||| ||||||||||| ||||| ||
Sbjct 230290 ACGCTTGCGCAGCCAGAAAATGGAGGCGAAAGCGCCCGAGAAGAAGATACCCTCGACGGC 230231
Query 130147 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAA-CCACTTCATCG 130205
|| || || | ||||||| ||||||| || | || ||| |||||| | |
Sbjct 230230 GGCAAAGGCCACCAGACGCTGGGCAAAGG-TCGACTCGCGGTCGGAAATCCACTTGAGAG 230172
Query 130206 CCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCT 130265
|||| | ||||| || || || | ||| | ||| || | || || | |
Sbjct 230171 CCCAGTCGGCCTTGCGGCGAATGCAAGGAATGGTGTCGATGGCGTTGAACAGGTAGCTGC 230112
Query 130266 TTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGACCA 130325
| | || || |||||||| | || ||||| || || || || ||||
Sbjct 230111 GCTGGGCAGGCTCCTTGATGTAGGTGTCGATGAGCAGCGAGTACGTCTCCGAGTGGATGT 230052
Query 130326 T-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCT 130384
| | ||| || | ||| | ||||||| |||| || ||| ||||| |||||| |
Sbjct 230051 TCTCCATCAT-GATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGGGATCTGGACCTCACCC 229993
Query 130385 GCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGG 130444
| ||| | | ||||| ||||| || || || |||| || || ||||||
Sbjct 229992 GAGAAACGCTCGACCAAGTTCTCGTTGACAATGCCGTCCGAAGCAGCGAAGAAGGCCAGG 229933
Query 130445 ATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAAGATCC 130501
| | | ||||| | || ||| | || ||||| || | |||||||||| |||||||
Sbjct 229932 ACGTGCGAGATGAAGTACTTTTCGTCCTTGTTCATGCGGTTGTTCCAGTCGTGAAGATCC 229873
Query 130502 TTCGAGAGATCTACCTCCTCCGCAGTCCA 130530
|| || ||||| | |||||| || |||||
Sbjct 229872 TTGGACAGATCAATCTCCTCGGCCGTCCA 229844
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618434968086800
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