Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03- 01] 30 sequences; 29,634,442 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq19 268 1e-66 seq18 150 2e-31 >seq19 Length=545716 Score = 268 bits (296), Expect = 1e-66 Identities = 1181/1848 (64%), Gaps = 55/1848 (3%) Strand=Plus/Plus Query 117805 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 117864 ||||||||||||| ||| |||| | || ||||||||||| ||||||||||| | Sbjct 481107 TGAACTGAATGGGCGCCGCAGCCGCCTGCGTACGCAGGTAGTACATGCCCGTCTTGAGAC 481166 Query 117865 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGA 117924 || |||||||| | | ||||| || | |||| | || || | |||| Sbjct 481167 CCAGCTTCCAGCCCGCAAAGTGCATGCTGGTAATCTTGCCCATCGTAGGGTCCTTCATGT 481226 Query 117925 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCA 117984 | ||| | ||||| || ||||| ||| || ||||| || ||||| | || Sbjct 481227 GAATGTTGAGCGACTGGGACTGGTCGATAAAGGCACCACGATCAGCAGCCATCTG---CA 481283 Query 117985 CATCCTTCATCTTG---ATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGA 118041 || || | || || |||||||||||| |||| || ||| ||||| || |||| Sbjct 481284 CAACCGTACGCTGCGAAATCTCCCACACAGTCTTGTACAGCGCCTTGATATCGTC-GGGA 481342 Query 118042 TATCCACG--ATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTT 118099 || | | || || ||||| ||||| | || | ||| | | |||||| | | Sbjct 481343 -ATGCTGGGAATGTTCTGGATAGATCCGTTCTCCGCAATGATGCGGTTCTTCATGTTGTC 481401 Query 118100 TGACCAGAGACCAATCTTTTTGAGATCCTCCACG-AGATGCTTA---TTGACAACAACAA 118155 ||||| ||||| | | ||||| ||| || || | |||||||| | Sbjct 481402 CGACCACAGACCCAGGTCCACCAGATC----ACGCAGCAGCCAAGGGTTGACAACCTGGA 481457 Query 118156 ACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCAT 118215 |||| || || || || | | | || || |||| ||||| |||||||||||||| | Sbjct 481458 ACTCGCCAGCCAGCACACGACGCTGGTAAATGTTGGAAGTGTACGGCTCAAAGCACTCGT 481517 Query 118216 TGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTAC 118275 |||| |||| || || | ||| ||| || ||||| || || | ||||| ||| | Sbjct 481518 TGTTGCCCAGAATCTGCGACGTGCTGGCCGTCGGCATCGGCGCAAGCAGAAGCGAGTTGC 481577 Query 118276 GGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCT 118335 | | ||| || | | | || | |||||||| | ||||||| || | | | | Sbjct 481578 GCACACCGTTCTGCTTGATCTGCTCCTTGAGCGACGCCCAGTCCCAGAGGTCGCTGGGCG 481637 Query 118336 CCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCT 118395 | | |||||| || ||||| ||||| || || || | ||||| |||||| | || Sbjct 481638 TGACATTCCACATGTCGAACTGCAGGATGCCCTGAGAAACGGGCGAACCCTCATACGTAG 481697 Query 118396 CATATGGGCCCTCAACCTCCGCCAATTCG---GAGCTCGCCTCGAGGGCTGCGTGATACA 118452 || | ||||| ||| || | ||| ||| || | ||||| ||||| || | Sbjct 481698 AGTAGGTACCCTCCTCCTTGGCAATTTCCATCGAGGCCGTC---AGGGCAGCGTGGTAGA 481754 Query 118453 TTGTTTCAAAAATGCGAGCATTCA--TTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCG 118510 | |||||||| || ||| || | |||| |||||| | || ||||| | | || Sbjct 481755 TGGTTTCAAAGATCTGAGTGTTGAGCTTGCGA--GCCTCGGCAGACTCAAAAGGCATGCG 481812 Query 118511 GCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCAT 118570 | | || |||| || ||||| || ||||| | ||||| || || || | ||| Sbjct 481813 CAGCGCCAGGAAGGCATCAGCCAGACCCTGAACACCAACACCAATGGGACGGTGACGCAT 481872 Query 118571 ATTAGACTTCCGAGCGGTCTC---CACGGGATAAAAATTCCTATCGATAACCCTATTTAG 118627 || || | || ||| |||||| || || || || | | || || Sbjct 481873 GTTGCTGTTGTGGGC---CTCAGGCACGGGGTAGTGGTTGACGTCAATGATGCGGTTCAG 481929 Query 118628 ATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTC 118687 || |||||||| |||| || || ||||| | | | || | | | | Sbjct 481930 GTTGCGCACAACAACCTTGGTGACCTCGTGCAGCTTCTGGAAGTCGTACTCGTTCTTGTT 481989 Query 118688 TTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTT 118747 | | |||| || || || || | || ||||| || ||||| | |||||| Sbjct 481990 GTAGTCGACAAACGACGGCAGAGCCAGCGAAGCCAGGTTGCACACGGCAACCTCATCAGG 482049 Query 118748 ATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTT 118807 || |||||| ||||| || ||||||| ||| || || ||||| |||| |||||| Sbjct 482050 CGCACAGTACTCAATAATCTCAGTGCACAGGTTGGAGCTGCGGATGGTACCCAGGTTCTT 482109 Query 118808 TTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGT 118867 || || ||| ||| || |||||||| |||||| | || | || ||||| || Sbjct 482110 CTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAGCATGAACGGGTTGCCTGTCTCGGT 482169 Query 118868 TTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCC 118926 |||| || ||||| || | ||| | | || | || | | | ||| | | || | Sbjct 482170 CTGGGCCTCCAGAATGGCGTACCACAGCTTCTGGGCCTTGATC-GACGCGCGGCCACGGC 482228 Query 118927 CCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCC 118986 |||||| |||||||||| ||| ||||| |||||||| || || | || | || | Sbjct 482229 CCTCTTGCTCGTACTTTTCGTACAGGGCCTCAAACTCCTCGCCGTAGCAATCAGCCAGGC 482288 Query 118987 CTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGA 119046 | || || | ||||| | || | ||| | | | || ||| || |||||||||| Sbjct 482289 CAGGGCACTCGTTGGGGCACATCAGGGTCCAGTCAGCGTTCTTCTCGACACGCTTCATGA 482348 Query 119047 AGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCT 119106 |||| || || ||||| |||||| ||| ||||| || |||| | || || | || | Sbjct 482349 AGAGATCGGGAATCCACAGCGCCAGGAAAAGATCGCGGGCGCGAACCTCCTCCTTGCCGT 482408 Query 119107 GATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCG 119166 | || |||| || | || || | | ||||||||||||||| |||||||| | | Sbjct 482409 GGTTCTTGCGCAGGTCAAGGAACTCAAACACATCCGCGTGCCACGGCTCCAGGTAAATGG 482468 Query 119167 CGATTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAA 119220 | | | || | | || ||| |||||| || || | |||||| ||| | Sbjct 482469 CAAAGGCACC---AGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGGGCAGTGTTGTTGA 482525 Query 119221 ATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAA--TACGAGA 119278 | ||||| ||||| ||||||||||| | ||| || ||||| || || |||||| Sbjct 482526 ACACACGCAGCATGGGAATGATACCGTTGGAGGTACCGTTTGTGCCGGCAATGTACGAGC 482585 Query 119279 CTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTG 119338 | | |||| | | ||||| | | ||| ||||| || ||| ||| ||||| Sbjct 482586 C--AGTGGCACGAATGCGGTGGACATTGAGACCGATACCACCAGCCATCTTGGAGATCAT 482643 Query 119339 CGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAG 119398 || || | ||||| | |||| || || ||||||||||| |||| | | | || Sbjct 482644 AGCACAAGTCTTGAGAGTATCGTAAATGCCCTCGATCGAGTCTTCCTTCATGTCAACCAG 482703 Query 119399 GAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTG 119458 |||||| |||| |||| | ||| ||||| |||||||| ||||| || | ||||| Sbjct 482704 GAAGCAAGAGGACAGCTGAGCCTGGGGCGTACCCGCGTTGAAAAGAGTGGGCGAGGCGTG 482763 Query 119459 GATGAACATACCTTG--GGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCT-TC 119515 | ||| | | |||| ||||| || ||| |||| ||| | ||| | ||| || Sbjct 482764 GGTGA--AGAACTTGCTAGACATGAGGTTGTACGTCT-CAATAACACGGTCAACTCTGTC 482820 Query 119516 CCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACC 119575 || ||| |||| | || ||||||| ||||| ||||| || | | | || Sbjct 482821 ACCCCAAATGCCGACAGCAACACGCATAATCATGTGCTGGGGACGCTCGACAATCTTGCC 482880 Query 119576 ATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATA 119623 |||||| || | ||||| ||||| |||||||| ||||| || Sbjct 482881 GTCGAGCTTCAGCAGGTACGAACGCTCCAGGGTCTTGAAGCCAAAGTA 482928 >seq18 Length=564976 Score = 150 bits (166), Expect = 2e-31 Identities = 524/809 (65%), Gaps = 9/809 (1%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| ||||| ||||||||||||||||| ||||| ||| ||| ||| |||||||| Sbjct 230649 TAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTACCGCCCAGCGAGATGTTCTCCATG 230590 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAATCTGTTTGAGGAGACG 129846 || ||||| |||||| | ||| | | | || | |||| || ||||| Sbjct 230589 AAGTCAAAGGGGTTCGTGGAGCGGTAGACCTTCTCGTTG-CCAAGGGCAACCAGCAGACG 230531 Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906 || | ||| |||||||||||| ||| |||| |||||| || | ||| || Sbjct 230530 GTCGGCGACAAACTCAATGTACTGCTTCATGAGGTCGGCGTTCATGCCAAGCAGGGCGCA 230471 Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966 || || || || | |||| ||||||||||| | || || || | ||| | | Sbjct 230470 AGGCAGAGCCTCGGTCAGGAACTCCTTCTCAATGACAACGGCATCGGTGATGATCTCCTC 230411 Query 129967 AATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTCCTG 130026 || || | ||| ||| | || || | |||||| |||||| || Sbjct 230410 AACAAGCTTCTTGCTAGGGCGGGTGTTCAGGTGCGAGAAGAGCAGGCAGGCAAAGTCGGT 230351 Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086 ||| |||||||||||||| || || || || || || ||| |||||| ||||| ||||| Sbjct 230350 GTGCAGACCCTCGTCACGCGAAATCAGCTCGTTGGAAAAGGTCAGACCGGGCATCAGACC 230291 Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146 ||||| || ||||||||| | || | ||| ||||||||||| ||||| || Sbjct 230290 ACGCTTGCGCAGCCAGAAAATGGAGGCGAAAGCGCCCGAGAAGAAGATACCCTCGACGGC 230231 Query 130147 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAA-CCACTTCATCG 130205 || || || | ||||||| ||||||| || | || ||| |||||| | | Sbjct 230230 GGCAAAGGCCACCAGACGCTGGGCAAAGG-TCGACTCGCGGTCGGAAATCCACTTGAGAG 230172 Query 130206 CCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCT 130265 |||| | ||||| || || || | ||| | ||| || | || || | | Sbjct 230171 CCCAGTCGGCCTTGCGGCGAATGCAAGGAATGGTGTCGATGGCGTTGAACAGGTAGCTGC 230112 Query 130266 TTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGACCA 130325 | | || || |||||||| | || ||||| || || || || |||| Sbjct 230111 GCTGGGCAGGCTCCTTGATGTAGGTGTCGATGAGCAGCGAGTACGTCTCCGAGTGGATGT 230052 Query 130326 T-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCT 130384 | | ||| || | ||| | ||||||| |||| || ||| ||||| |||||| | Sbjct 230051 TCTCCATCAT-GATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGGGATCTGGACCTCACCC 229993 Query 130385 GCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGG 130444 | ||| | | ||||| ||||| || || || |||| || || |||||| Sbjct 229992 GAGAAACGCTCGACCAAGTTCTCGTTGACAATGCCGTCCGAAGCAGCGAAGAAGGCCAGG 229933 Query 130445 ATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAAGATCC 130501 | | | ||||| | || ||| | || ||||| || | |||||||||| ||||||| Sbjct 229932 ACGTGCGAGATGAAGTACTTTTCGTCCTTGTTCATGCGGTTGTTCCAGTCGTGAAGATCC 229873 Query 130502 TTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 || || ||||| | |||||| || ||||| Sbjct 229872 TTGGACAGATCAATCTCCTCGGCCGTCCA 229844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434968086800