Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03-
01] 30 sequences; 29,634,442 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq6 109 4e-19
>seq6
Length=1902109
Score = 109 bits (120), Expect = 4e-19
Identities = 141/192 (73%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| |||||||||||||| || ||||| ||||| || ||||| || ||||| ||||| |||
Sbjct 107425 AAGATGCAGATTTTCGTCAAGACCCTGACGGGTAAGACGATTACCCTCGAGGTTGAGTCC 107484
Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
|||||||| | || ||| | || | ||||| ||||| || || | || || ||
Sbjct 107485 TCGGACACTATCGACAATGTCAAGTC-CAAAATCCAGGACAAGGAGGGCATTCCCCCGGA 107543
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786
||| ||||| | || || || ||||| || ||||| || | |||||| | ||| ||
Sbjct 107544 TCAGCAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACTCTGTCCGACTA 107603
Query 23787 CAACATACAAAA 23798
|||||| || ||
Sbjct 107604 CAACATCCAGAA 107615
Score = 86.0 bits (94), Expect = 4e-12
Identities = 147/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || || || || || || || || ||||| || || || || || ||
Sbjct 700970 ATGCAGATCTTTGTGAAGACGCTGACTGGCAAGACCATCACGCTAGAGGTCGAATCGTCG 701029
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | || | || | || ||||| || ||| | || || || ||
Sbjct 701030 GACACGATTGACAATGTCAAGTCGAAGA-TTCAGGACAAGGAGGGTATTCCTCCGGACCA 701088
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||||| | || ||||| || || || ||||| || | || || | |||||||||
Sbjct 701089 GCAGCGTCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGTACGCTTTCCGATTACAA 701148
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820
||| || || ||||| || | ||| | |||
Sbjct 701149 CATCCAGAAGGAGTCGACTCTGCATCTGGTT 701179
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338009476415240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |