Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03-
01] 30 sequences; 29,634,442 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq1 87.8 1e-12
>seq1
Length=4116995
Score = 87.8 bits (96), Expect = 1e-12
Identities = 159/233 (68%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 27385 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACG 27444
|| ||||| || | || |||||||| || || | ||| ||||| | | || |||
Sbjct 2530587 GGATTCCACGCACTCATAATGATGCGTCTATCGTAGGGGGTGTTCTTCAGCTTGTGCACC 2530646
Query 27445 GCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCT 27504
| | | |||||| || || ||| |||| ||||||| | | || ||||||
Sbjct 2530647 ACCTCTGCCAGCTGGTCGACACCCTGGCCCGTGTAGTCTGTCTGCGCATCGACATACTCT 2530706
Query 27505 GCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGC 27564
|| || ||||||| ||| |||||||||||||| || |||| ||| ||||| ||| |||
Sbjct 2530707 GCGCCAAAATGCCGCCACTGGAACCCGTACACGGGGCCCAAGTCGCCCTCGGCCCGGTGG 2530766
Query 27565 TCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTT 27617
| | |||| ||| || | | | || |||||| ||||||| |||||
Sbjct 2530767 CCCAGGCCCACGCTGTTCAGGTACGCGCGCGACCCGTTGCCGTCCCATATCTT 2530819
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369507064898930
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |