Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599615.1_202016-03-
01] 30 sequences; 29,634,442 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq6 165 8e-36
seq16 145 7e-30
>seq6
Length=1902109
Score = 165 bits (182), Expect = 8e-36
Identities = 165/211 (78%), Gaps = 5/211 (2%)
Strand=Plus/Minus
Query 41658 GATGCAGCGT-GCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGC 41716
||||||| || ||| ||||||| ||||| |||||||| || ||||| | || || |||
Sbjct 107633 GATGCAGGGTTGCTGACCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCCTCCAGC 107574
Query 41717 TGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATT 41776
|||||||| ||||| ||||||||||| || |||| ||||| || |||||||||| ||||
Sbjct 107573 TGCTTGCCAGCGAAGATCAGGCGCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATT 107514
Query 41777 TTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTAC 41834
|| ||| || | || | |||||| ||||| ||||| | || ||||| ||||
Sbjct 107513 TTGGACTTGACATTGTCG--ATAGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTAC 107456
Query 41835 CCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
||||||| ||||| |||||||||||||| ||
Sbjct 107455 CCGTCAGGGTCTTGACGAAAATCTGCATCTT 107425
Score = 134 bits (148), Expect = 1e-26
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | ||||||||||| || ||||||||| ||||| ||||||||
Sbjct 700968 CCACCACGGAGGCGGAGAACCAGATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAA 700909
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| | || || ||||||||||||||||| ||||| ||||| ||||||| |||
Sbjct 700908 AGAGTGCGACCATCCTCAAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCCGGAGGA 700849
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || |||||||||| ||| || ||| || | | | || || ||||||||
Sbjct 700848 ATGCCCTCCTTGTCCTGGATCTTCGACTT-GACATTGTCAATGGTATCCGATGACTCCAC 700790
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||| | || || || || || || || ||||| || || ||||||||
Sbjct 700789 CTCAAGGGTGATAGTCTTTCCGGTAAGAGTCTTGACAAAGATCTGCAT 700742
Score = 122 bits (134), Expect = 8e-23
Identities = 166/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || || || | ||||||||||| || ||||||||| ||||| || |||||
Sbjct 701197 GCCACCACGCAGGCGCAGAACCAGATGCAGAGTCGACTCCTTCTGGATGTTGTAATCGGA 701138
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|| || || | || || |||||||| || || || ||||| ||||| ||||||| ||
Sbjct 701137 AAGCGTACGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGAGG 701078
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
|| | |||||||||| ||| | || | | || | | | ||||| ||| || |
Sbjct 701077 AATACCCTCCTTGTCC-TGAATCTTCGACTTGACATTGTCAATCGTGTCCGACGATTCGA 701019
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||| | ||| || || || || ||||||||||| || || ||||||||
Sbjct 701018 CCTCTAGCGTGATGGTCTTGCCAGTCAGCGTCTTCACAAAGATCTGCAT 700970
Score = 116 bits (128), Expect = 3e-21
Identities = 158/218 (72%), Gaps = 2/218 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | |||||| || || || ||||||||| ||||| ||||| ||
Sbjct 700740 CCACCACGGAGACGAAGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAA 700681
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| | || || ||||||||||||||||| ||||| ||||| ||||||| |||
Sbjct 700680 AGAGTGCGACCATCCTCAAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCCGGAGGA 700621
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | |||||||||| ||| | || | | ||| | | | || || |||||| ||
Sbjct 700620 ATACCCTCCTTGTCC-TGAATCTTGGACTTGACGTTGTCGATGGTATCCGACGACTCGAC 700562
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGA 41852
|| | || || || || || || || ||||| ||||
Sbjct 700561 TTCGAGAGTAATGGTCTTGCCGGTGAGGGTCTTGACGA 700524
>seq16
Length=638914
Score = 145 bits (160), Expect = 7e-30
Identities = 147/189 (78%), Gaps = 2/189 (1%)
Strand=Plus/Minus
Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732
||||||||||||| |||||||| |||||||| | || || ||||||||||| ||||| |
Sbjct 520932 CCTTCTGAATGTTGTAGTCGGACAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGA 520873
Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792
|||| ||||| ||||||| ||||| || |||||||||| ||| || ||| ||| |
Sbjct 520872 TCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTT-GACGTTG 520814
Query 41793 AC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851
| | ||||| ||||| ||||||| || || || ||||||||||| ||||| |||
Sbjct 520813 TCGATCGTGTCCGAGGACTCGACCTCCAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 520754
Query 41852 AAAATCTGC 41860
||| | |||
Sbjct 520753 AAACTGTGC 520745
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462303826636000
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