Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq1092 136 8e-27
seq677 84.2 5e-11
>seq1092
Length=189081
Score = 136 bits (150), Expect = 8e-27
Identities = 316/470 (67%), Gaps = 10/470 (2%)
Strand=Plus/Minus
Query 230173 TTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTC 230232
|||||| | ||||| || |||| | || ||||| || | || || ||| | |
Sbjct 137397 TTTGCCCAACGTCTGGTGGCCTTTGCCGCCGTCGAAGGCATCTTCTTCTC-GGGCGCCTT 137339
Query 230233 TGCG-CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGA 230291
||| |||||||||||||||| || ||| | ||||| ||||| | || |||||
Sbjct 137338 TGCTTCCATCTTTTGGCTGCGCAAGCGCGGTCTCATGCCCGGCCTGACCTTTTCCAACGA 137279
Query 230292 GTTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAAAGCT 230351
| | || ||||||||||| || || | | || | | || | | || | ||
Sbjct 137278 GCTGATTTCCCGCGACGAGGGCCTGCACACAGACTTTGCCTGCCTGCTCTTCTCGCACCT 137219
Query 230352 CCAGAACAAGCTACCATTCGAGACGGTCA---AACAAATCATTACAGAAGCAGTTGAAAA 230408
| ||||| | || | ||| | | | | ||||||| || || || || | |
Sbjct 137218 C---AACAACCGCCCCAGCAAGAAGCTGATTGAGGAAATCATCACCGACGCTGTCGCCAT 137162
Query 230409 CGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC-CTTATTGGCATGAACGCTGAAC 230467
|||||||||||| | ||||| | || || ||| || | ||||||||||| || |
Sbjct 137161 TGAAAAGGAGTTCTTGACCGACGCCCTGCCCTG-CGCTCTGCTCGGCATGAACGCCGACC 137103
Query 230468 TTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGA 230527
| ||| |||||||| || || || |||||||| | | || || || || |||| |
Sbjct 137102 TGATGAAGCAGTACATTGAGTTTGTTGCCGACCGTCTGCTGGTCGCCCTCGGCAACGAAA 137043
Query 230528 AAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGA 230587
| || ||| ||| | |||||||||| || |||||| ||| ||||| || ||||
Sbjct 137042 AGGTCTACCGCTCCACCAACCCCTTTGACTTCATGGAGAACATCTCGCTCGGCGGCAAGA 136983
Query 230588 CCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637
||||||||||||| ||||||||| | ||||| || | | | |||||| ||
Sbjct 136982 CCAACTTCTTCGAGAAGCGTGTCGGCGACTACCAAAAGGCCGGTGTGCTG 136933
>seq677
Length=56570
Score = 84.2 bits (92), Expect = 5e-11
Identities = 123/174 (71%), Gaps = 0/174 (0%)
Strand=Plus/Minus
Query 319857 GGGGAACCCTTCAAGCTGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCC 319916
|||||| || |||| ||| |||| || ||||||||||| || || || |||| ||
Sbjct 3107 GGGGAAACCCTCAACCTGCTCGTTGTTGATGGCGCGCATCAGCGTCGACTTGCCCGAACC 3048
Query 319917 GTTTGGCCCACACAGACCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAG 319976
||| || || |||||||||||||| | || || ||||| | | || | ||| ||
Sbjct 3047 GTTGGGACCGCACAGACCGTAGCGCTGGCCACGCTTCAGACGCAGATGGGTCTGGTTAAG 2988
Query 319977 AAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 320030
||||| || |||| || || ||||| || || | ||||| ||||||||
Sbjct 2987 CAGAATCTTGGCACCGTAGGCAAGAGAGAAGGTGCAGTTGCACAGGTCCTCACC 2934
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057792623948450
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |