Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq1092 131 2e-25
>seq1092
Length=189081
Score = 131 bits (144), Expect = 2e-25
Identities = 554/860 (64%), Gaps = 29/860 (3%)
Strand=Plus/Plus
Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733
||||||| |||| || || || ||||| ||||| || ||||| | || || || ||||
Sbjct 136947 TTTGGTAGTCGCCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCGAGCGAGATGTTCT 137006
Query 16734 CCATGAAATCAAAAGGATTAGT--AGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGAT 16791
||||||| ||||| || || || ||| | | | |||| | | || || || | |
Sbjct 137007 CCATGAAGTCAAAGGGGTTGGTGGAGCGGTAGACCTTTTCG--TTGCCGAGGGCGACCAG 137064
Query 16792 TAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAG 16851
| | || || ||||| || || || || ||| | ||| |||||| || | ||
Sbjct 137065 CAGACGGTCGGCAACAAACTCAATGTACTGCTTCATCAGGTCGGCGTTCATGCCGAGCAG 137124
Query 16852 A-CGTACCGGAAGAGCTTCCGTCAAAAA-TCGTTGCTCTATAACAACCGCTTCCTTAATA 16909
| || | || || || || ||||| || || || || || | || || || | ||
Sbjct 137125 AGCGCAG-GGCAGGGCGTCGGTCAAGAACTCCTTT-TCAATGGCGACAGCGTCGGTGATG 137182
Query 16910 ATA----CTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACA 16965
|| | | || || || || || |||| |||| | | || || | ||| ||
Sbjct 137183 ATTTCCTCAATCAGCTTCTTGCTGGGGCGGT---TGTTGAGG-TGCGAGAAGAGCAGGCA 137238
Query 16966 TGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCC 17025
|| || || || | |||||||| | | || || ||||| ||||| |||| ||
Sbjct 137239 GGCAAAGTCTGTGTGCAGGCCCTCGTCGCGGGAAATCAGCTCGTTGGAAAAGGTCAGGCC 137298
Query 17026 GGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATAT 17085
|||||| || || || | |||||| || | || || | || || ||||| ||
Sbjct 137299 GGGCATGAGACCGCGCTTGCGCAGCCAAAAGATGGAAGCAAAGGCGCCCGAGAAGAAGAT 137358
Query 17086 ACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAAT 17145
|| ||||||| ||||| || | | |||| ||| | |||| || | || |||
Sbjct 137359 GCCTTCGACGGCGGCAAAGGCCACCAGACGTTGGGCAAAGGTCGACTCGTGGTCGGCAAT 137418
Query 17146 CCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAA 17205
||| || | |||| ||||| || | ||||| || || || ||||| |||||
Sbjct 137419 CCACTTGAGGGCCCAGTCGGCCTTGCGGCGGATGCAGGGAATAGTATCAATGGCGTTAAA 137478
Query 17206 TAATTT-CT-CTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATT 17263
| | || | | | | | || | || ||||| || || || || ||| |
Sbjct 137479 CAGGTAGCTGCGCTGGGCGG--GCTCCTTGATGTACGTGTCAATCAGCAGCGAGTATGTC 137536
Query 17264 TCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATT 17323
|||||||| ||||||||||| |||||||| ||||| ||||| ||||| || | ||
Sbjct 137537 TCGGAGTGGATGTTCTCCATCATGATCTGAAAGCCGTAGAAGCAGCGGGCCTCGGGGATC 137596
Query 17324 TGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCG 17383
|| || || | |||| || || | || || ||||| || |||||||| ||||||
Sbjct 137597 TGGACCTCGCCCGAGAAGCGCTCGACCAGGTTCTCGTTGACAATGCCGTCCGACGCGGCA 137656
Query 17384 AAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACGCG------C 17437
|| || |||| | ||| ||||| || ||||||||| ||| | ||| |
Sbjct 137657 AAGAAGGCCAGCACGTGCGAGATGAAGTACTTTTCGTCC-TTGT--TCATGCGGTTGTTC 137713
Query 17438 CAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCC 17497
||||| | | || ||||| | || | || |||| ||||| || ||| | |||
Sbjct 137714 CAGTCGTGCAGGTCCTTGGACAGGTCAATCTCCTCGGCAGTCCAGAAGGACGCCTCGGCC 137773
Query 17498 TTTTTATACATATTCCAAAT 17517
||||| ||||| | ||| ||
Sbjct 137774 TTTTTGTACATTTGCCAGAT 137793
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517530623524200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |