Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq1750 154 2e-32
seq1092 105 8e-18
>seq1750
Length=138661
Score = 154 bits (170), Expect = 2e-32
Identities = 457/700 (65%), Gaps = 16/700 (2%)
Strand=Plus/Minus
Query 53981 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 54040
||||| || || | |||||||||| | ||| | ||| | || || || |||||
Sbjct 35645 CCAGGGCACTCGTTGGGACACATCAGGGTCCAGTTCTCGTTCTTCTCGACACGCTTCATG 35586
Query 54041 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCT 54100
|| | || |||||||| ||||||| || || || | || | ||||| || ||
Sbjct 35585 AACATGTCGGGAATCCACAGAGCTAGGAACAGGTCACGGGCGCGGACCTCCTCCTTACCA 35526
Query 54101 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 54160
|||||| || || |||||| | | | ||| | |||||||| |||| ||| |||
Sbjct 35525 TGATTCTTGCGCAGGTCAAGGAACTCAAACACATCGGCGTGCCACGGCTCCAGGTAAATG 35466
Query 54161 GTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 54220
| | | | ||||| || ||||| || ||||| || | || | || ||||| || |
Sbjct 35465 GCAAAAGCACCAGGGCGCTTGTTGCCGCCCTGGTCGACATAGCGGGCAGTGTTGTTGAAC 35406
Query 54221 ACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCA 54280
|| | || ||| || ||||| || ||||| | ||| ||||| || | || || |||
Sbjct 35405 ACGCGCAGCATGGGGATAATGCCGTTGGAGGTACCGTTGGTACCAGCAATGTACGAGCCA 35346
Query 54281 CTGGCACGAATATTACTAA--TTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATG 54338
|||| || ||| || |||| | || || || || ||||| || || || | |
Sbjct 35345 GTGGCGCGGATACGGTGAACATTGA--GGCCGATACCACCAGCCATCTTGGAAATCATAG 35288
Query 54339 CGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAA 54398
| || || | ||||| || ||||| || || || ||| |||||| || ||||
Sbjct 35287 CACAAGTCTTGAGAGTATCGTAAATGCCTTCAATCGAGTCCTCCTTCATGTCAACCAGAA 35228
Query 54399 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 54458
| || |||| ||| || ||| || || || || | || || || ||||| |
Sbjct 35227 AGCAAGATGACAGCTGGGCCTGAGGAGTACCAGCGTTGAACAGAGTGGGCGAGGCGTGAG 35168
Query 54459 TAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGAT-----AGCTGAGTCTAT-ATCCC 54512
|||| | || || | || ||||||||||| || | || ||| | | |||
Sbjct 35167 TAAAGAACTTGCTCGACATGAGGTTGTACGTCTCAATGACGCGGTCGACTCTGTCACCCC 35108
Query 54513 ATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT 54572
| |||| || || || |||||||| | ||||||||| || | || || ||||||
Sbjct 35107 A--GATG----CCAACAGCCACACGCATAATCATGTGCTGGGGACGCTCGACAATCTTGC 35054
Query 54573 TGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAA 54632
|| | ||||||| ||| || |||| || || || ||||| || | ||| ||
Sbjct 35053 CGTCCAACTTCAGCAGGTACGAACGCTCCAGGGTCTTGAAGCCAAAGTACTGGTAGTTAA 34994
Query 54633 AGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTT 54672
|||| || ||||| | ||| | |||| || | ||||||
Sbjct 34993 AGTCACGATCGTACACAATGGCAGAGTCCAGCTCATCCTT 34954
>seq1092
Length=189081
Score = 105 bits (116), Expect = 8e-18
Identities = 352/543 (65%), Gaps = 6/543 (1%)
Strand=Plus/Plus
Query 24149 GTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 24208
||| || |||||||| | ||| | ||||||||||| || || |||||||| || ||
Sbjct 137251 GTGCAGGCCCTCGTCGCGGGAAATCAGCTCGTTGGAAAAGGTCAGGCCGGGCATGAGACC 137310
Query 24209 ACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGC 24268
||||| |||||||| ||||| ||||| | || || ||||| || ||||| || ||
Sbjct 137311 GCGCTTGCGCAGCCAAAAGATGGAAGCAAAGGCGCCCGAGAAGAAGATGCCTTCGACGGC 137370
Query 24269 CGCAAAGGCAATAAGTCTTTCTCCATA-ACCG--GCGCTGTCATGTATCCACTTTTGAGC 24325
|||||||| | || | || || | || || ||| |||||||| | ||
Sbjct 137371 GGCAAAGGCCACCAGACGTTGGGCAAAGGTCGACTCGTGGTCGGCAATCCACTTGAGGGC 137430
Query 24326 CCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGttttt 24385
||| |||||||| | || || || || || || || ||||| || ||| |
Sbjct 137431 CCAGTCGGCCTTGCGGCGGATGCAGGGAATAGTATCAATGGCGTTAAACAGGTAGCTGCG 137490
Query 24386 ttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTT 24445
| || || | || || ||||||| || || | || || || |||||
Sbjct 137491 CTGGGCGGGCTCCTTGATGTACGTGTCAATCAGCAGCGAGTATGTCTCGGAGTGGATGTT 137550
Query 24446 TTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTATACA 24505
|| || || ||||| |||||||| || | ||||||| ||||| || || |
Sbjct 137551 CTCCATCATGATCTGAAAGCCGTAGAAGCAGCGGGCCTCGGGGATCTGGACCTCGCCCGA 137610
Query 24506 AAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATAC 24565
|| || || | | || || || || || ||||| || ||||| || |||| ||
Sbjct 137611 GAAGCGCTCGACCAGGTTCTCGTTGACAATGCCGTCCGACGCGGCAAAGAAGGCCAGCAC 137670
Query 24566 ATGTTTTATAAAATATTTTTCGT-CTGGT--GTTAGTTTATTCCAATCATTGATATCTTT 24622
|| || || || ||||||| || || | | || ||||| || | | || ||
Sbjct 137671 GTGCGAGATGAAGTACTTTTCGTCCTTGTTCATGCGGTTGTTCCAGTCGTGCAGGTCCTT 137730
Query 24623 AGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCA 24682
|| | || | || || | ||||| || || ||||| |||||||| ||||| | |||
Sbjct 137731 GGACAGGTCAATCTCCTCGGCAGTCCAGAAGGACGCCTCGGCCTTTTTGTACATTTGCCA 137790
Query 24683 GAT 24685
|||
Sbjct 137791 GAT 137793
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593704419181200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |