Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq534 100 3e-16
>seq534
Length=62730
Score = 100 bits (110), Expect = 3e-16
Identities = 215/318 (68%), Gaps = 14/318 (4%)
Strand=Plus/Minus
Query 145866 CGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGC 145925
|| ||||||||||||| | | ||||| |||||||||||||| ||||||||
Sbjct 46363 CGACACGTAGAACTGGGCAAACATATGGCACGGCGGCAGGGCCATCTTTTTGAGGTCCGC 46304
Query 145926 CGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCG---GGGTTCCTCTTGA---TCTC 145979
|| |||||||| | | | || | | || ||| ||| | ||| | | |
Sbjct 46303 GGGATTCCAGGCACTCATAATGA---TACGGCGATCGTACGGGCTGTGCTTTAGTTTGTG 46247
Query 145980 CCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCAC 146039
| ||| | | || ||||| || |||||||| || ||| || |||| | || ||
Sbjct 46246 CACTACCTCGGCC---AGCTGATCGACGCCCTGGCCGGTGTAGTCGGTCTGCGCATCGAC 46190
Query 146040 GTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTC 146099
||| |||| || ||||| | ||||||||| ||||| ||||| |||||||| || |
Sbjct 46189 GTATTCGGCGCCAAAGTGGCGCCACTGGAAGCCGTACACGGGGCCCAGGTCGCCCTCGGC 46130
Query 146100 CCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTT 146159
| || | ||| ||| | | | ||||| | | || || |||||| |||||||||||||
Sbjct 46129 GCGATGGCTCAGACCGACACTGTCGAGGTAAGCGCGCGAGCCGTTGCCGTCCCAGATCTT 46070
Query 146160 GACGCC--CCTCGCGGAG 146175
| ||| | |||| |||
Sbjct 46069 AATGCCGGCTTCGCTGAG 46052
Score = 91.5 bits (100), Expect = 2e-13
Identities = 216/321 (67%), Gaps = 9/321 (3%)
Strand=Plus/Minus
Query 145537 TAGACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCC 145596
|| |||| ||||| ||| | | ||| || |||| ||| ||||| | | || |||
Sbjct 46758 TATACCGACATCTTCATCGCCAGCGCCTTATGCGGGTTGTACCCCTCGATAGTGAAATCC 46699
Query 145597 TCCGCCCTGAAGTCATCTATGTCCTCCA-CCCGCCTCAGG----ATCCTGAGCCTGGGAA 145651
||| | | | | || ||| || || |||| |||| | ||| ||||| ||||
Sbjct 46698 TCCAACTTCCACCCGTCGATG--CTGCAGCCCGGCTCACGCGCCATCTTGAGCAGCGGAA 46641
Query 145652 AGGGCCGGGGGCTCCTG-GTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACG 145710
| ||| || |||| | || | ||| | || ||| | ||| || |||| ||| ||
Sbjct 46640 ACTCCCGCGG-CTCCCGCGTAATCTGCACCTGCAGAGCCTCGACATGGTCAGCGTACACA 46582
Query 145711 TGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACC 145770
|| || || |||| ||| || | | |||||| |||| |||| | | || | |
Sbjct 46581 TGTGCATCGCCCATGACATGCGTCAGACTACCGGGCACGAGATCCGTAGCGCGCGCAAGC 46522
Query 145771 ATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCC 145830
|||| || ||||| || || || || ||||| ||||| || ||||||||||| | |
Sbjct 46521 ATGTGTGTGAGCAGCGAATACGACGCAATATTGAACGGCACGCCAAGCCCCATGTCGCAC 46462
Query 145831 GAGCGCTGGTACAGCTGGCAG 145851
|||||||||||||| ||||||
Sbjct 46461 GAGCGCTGGTACAGTTGGCAG 46441
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590059724652600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |