Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04- 03] 2,315 sequences; 28,117,660 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq534 100 3e-16 >seq534 Length=62730 Score = 100 bits (110), Expect = 3e-16 Identities = 215/318 (68%), Gaps = 14/318 (4%) Strand=Plus/Minus Query 145866 CGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGC 145925 || ||||||||||||| | | ||||| |||||||||||||| |||||||| Sbjct 46363 CGACACGTAGAACTGGGCAAACATATGGCACGGCGGCAGGGCCATCTTTTTGAGGTCCGC 46304 Query 145926 CGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCG---GGGTTCCTCTTGA---TCTC 145979 || |||||||| | | | || | | || ||| ||| | ||| | | | Sbjct 46303 GGGATTCCAGGCACTCATAATGA---TACGGCGATCGTACGGGCTGTGCTTTAGTTTGTG 46247 Query 145980 CCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCAC 146039 | ||| | | || ||||| || |||||||| || ||| || |||| | || || Sbjct 46246 CACTACCTCGGCC---AGCTGATCGACGCCCTGGCCGGTGTAGTCGGTCTGCGCATCGAC 46190 Query 146040 GTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTC 146099 ||| |||| || ||||| | ||||||||| ||||| ||||| |||||||| || | Sbjct 46189 GTATTCGGCGCCAAAGTGGCGCCACTGGAAGCCGTACACGGGGCCCAGGTCGCCCTCGGC 46130 Query 146100 CCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTT 146159 | || | ||| ||| | | | ||||| | | || || |||||| ||||||||||||| Sbjct 46129 GCGATGGCTCAGACCGACACTGTCGAGGTAAGCGCGCGAGCCGTTGCCGTCCCAGATCTT 46070 Query 146160 GACGCC--CCTCGCGGAG 146175 | ||| | |||| ||| Sbjct 46069 AATGCCGGCTTCGCTGAG 46052 Score = 91.5 bits (100), Expect = 2e-13 Identities = 216/321 (67%), Gaps = 9/321 (3%) Strand=Plus/Minus Query 145537 TAGACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCC 145596 || |||| ||||| ||| | | ||| || |||| ||| ||||| | | || ||| Sbjct 46758 TATACCGACATCTTCATCGCCAGCGCCTTATGCGGGTTGTACCCCTCGATAGTGAAATCC 46699 Query 145597 TCCGCCCTGAAGTCATCTATGTCCTCCA-CCCGCCTCAGG----ATCCTGAGCCTGGGAA 145651 ||| | | | | || ||| || || |||| |||| | ||| ||||| |||| Sbjct 46698 TCCAACTTCCACCCGTCGATG--CTGCAGCCCGGCTCACGCGCCATCTTGAGCAGCGGAA 46641 Query 145652 AGGGCCGGGGGCTCCTG-GTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACG 145710 | ||| || |||| | || | ||| | || ||| | ||| || |||| ||| || Sbjct 46640 ACTCCCGCGG-CTCCCGCGTAATCTGCACCTGCAGAGCCTCGACATGGTCAGCGTACACA 46582 Query 145711 TGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACC 145770 || || || |||| ||| || | | |||||| |||| |||| | | || | | Sbjct 46581 TGTGCATCGCCCATGACATGCGTCAGACTACCGGGCACGAGATCCGTAGCGCGCGCAAGC 46522 Query 145771 ATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCC 145830 |||| || ||||| || || || || ||||| ||||| || ||||||||||| | | Sbjct 46521 ATGTGTGTGAGCAGCGAATACGACGCAATATTGAACGGCACGCCAAGCCCCATGTCGCAC 46462 Query 145831 GAGCGCTGGTACAGCTGGCAG 145851 |||||||||||||| |||||| Sbjct 46461 GAGCGCTGGTACAGTTGGCAG 46441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590059724652600