Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq2283 116 3e-21
seq335 98.7 8e-16
seq1473 96.9 3e-15
>seq2283
Length=86879
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | ||| |||| || | ||| |||||||| || ||||| ||||| | |
Sbjct 41110 CCACCACGAAGGCGGAGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCAGAC 41051
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| || | ||||||||||| || ||||| |||| || | |||||||||| |||
Sbjct 41050 AGGGTACGGCCATCCTCCAGCTGCTTACCCGCGAAAATCAGACGCTGCTGGTCCGGGGGA 40991
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| || |||||||| |||||| || || | | | | ||||| | ||| |
Sbjct 40990 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATCCGACGACTCGACT 40931
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | || |||||||||||||| | || ||||| || ||||||||
Sbjct 40930 TCGAGAGTGATGGTCTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 40884
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || ||||| | || |||| || | ||||||||||| || ||||| ||||| | |
Sbjct 41338 CCGCCACGCAGACGCAGAACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 41279
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| || | ||||||||||| || ||||| |||| || | |||||||||| ||
Sbjct 41278 AGGGTACGGCCATCCTCCAGCTGCTTACCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGA 41219
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| ||||| || |||||| ||||| | | ||| ||||| || |||
Sbjct 41218 ATGCCCTCCTTATCCTGGATCTTCGACTTCACATTGTCGATGGTATCGGAGGATTCCACC 41159
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | || || ||||||||||| | || ||||| || ||||||||
Sbjct 41158 TCAAGAGTGATTGTCTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 41112
Score = 107 bits (118), Expect = 2e-18
Identities = 110/144 (76%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | ||| |||| || | |||||||||||| || ||||||||||| | |
Sbjct 40598 CCACCACGAAGGCGGAGAACCAGGTGGAGAGTGGACTCCTTCTGGATGTTATAGTCGGAC 40539
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| || ||||||||||||| || || ||| | || || | |||||||||| |||
Sbjct 40538 AGGGTACGGCCGTCCTCCAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGA 40479
Query 21069 ACGCCTTCCTTGTCGGCGATCTTT 21092
| || |||||||| |||||||
Sbjct 40478 ATACCCTCCTTGTCCTGGATCTTT 40455
Score = 102 bits (112), Expect = 7e-17
Identities = 155/221 (70%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | ||| |||| || | ||| |||||||| || ||||| ||||| | |
Sbjct 40882 CCACCACGAAGGCGGAGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCAGAC 40823
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| || ||||||||||||| || || ||| | || || | |||||||||| ||
Sbjct 40822 AGGGTACGGCCGTCCTCCAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCCGGAGGA 40763
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| ||||| || |||||| || || | | | | ||||| | ||| |
Sbjct 40762 ATGCCCTCCTTATCCTGGATCTTGGACTTGACGTTGTCAATGGTATCCGACGACTCGACT 40703
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATAT 21169
|| | || |||||||||||||| | || ||||| | |||
Sbjct 40702 TCGAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGACTAT 40662
>seq335
Length=221524
Score = 98.7 bits (108), Expect = 8e-16
Identities = 149/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 20979 GTGGACT--CCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGC 21036
||||||| |||| || ||||| ||||| | ||| || || | ||||||||||| ||||
Sbjct 117040 GTGGACTGACCTTCTGGATGTTGTAGTCAGACAGAGTGCGGCCATCCTCCAGCTGCTTGC 117099
Query 21037 CCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTT 21096
| || | || || | |||||||||| ||| | ||| |||||||| ||||| |
Sbjct 117100 CAGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACT 117159
Query 21097 TCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACG 21156
| || | | ||| ||| || || ||| || | |||||| ||||| || || | |
Sbjct 117160 TGACATTGTCGATAGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTCAGGG 117219
Query 21157 TTTTGACAAATATTTGCATTTTGAATCTCTT 21187
| ||||| || || ||||| ||||| || ||
Sbjct 117220 TCTTGACGAAAATCTGCATCTTGAACCTGTT 117250
>seq1473
Length=183801
Score = 96.9 bits (106), Expect = 3e-15
Identities = 130/181 (72%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 20986 CCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAA 21045
|||| |||||||| ||||| | |||||| || | ||||| ||||| ||||| ||| | |
Sbjct 105034 CCTTCTGAATGTTGTAGTCGGACAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGA 105093
Query 21046 TAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGC 21105
| || | |||||||||| ||| | ||| |||||||| |||||| || || | |
Sbjct 105094 TCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGT 105153
Query 21106 CGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAA 21165
||| || || || ||| |||| |||||||||||| || || | || ||||| |
Sbjct 105154 CGATCGTGTCCGAGGACTCGACCTCCAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 105213
Query 21166 A 21166
|
Sbjct 105214 A 105214
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422247286352540
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |