Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq1092 399 2e-106
seq2283 127 2e-24
seq335 123 3e-23
seq1473 109 6e-19
>seq1092
Length=189081
Score = 399 bits (442), Expect = 2e-106
Identities = 573/802 (71%), Gaps = 13/802 (2%)
Strand=Plus/Minus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| ||||||||||||||||||||||| |||||||| | ||||||| | ||||||
Sbjct 137793 ATCTGGCAAATGTACAAAAAGGCCGAGGCGTCCTTCTGGACTGCCGAGGAGATTGACCTG 137734
Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752
||||||||| | ||||||| | ||| ||||| | |||| | |||||| |
Sbjct 137733 TCCAAGGACCTGCACGACTGGAACAACCGCATGAACAAGGACGAAAAGTACTTCATCTCG 137674
Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812
|||||||||||||| || ||||| |||||||| ||||||||||| |||||||||||
Sbjct 137673 CACGTGCTGGCCTTCTTTGCCGCGTCGGACGGCATTGTCAACGAGAACCTGGTCGAGCGC 137614
Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872
||| | ||||| ||| | ||||||| || ||||||||||||||||||||| |||
Sbjct 137613 TTCTCGGGCGAGGTCCAGATCCCCGAGGCCCGCTGCTTCTACGGCTTTCAGATCATGATG 137554
Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT----GCGCTCTTC 116928
|||||| | ||||| || | || ||| || || ||||||||| | | || | |
Sbjct 137553 GAGAACATCCACTCCGAGACATACTCGCTGCTGATTGACACGTACATCAAGGAGCCCGCC 137494
Query 116929 GGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGC 116988
| | |||| | |||| |||||||| || || || || ||| || |||||
Sbjct 137493 --CAGCGCAGCTAC--CTGTTTAACGCCATTGATACTATTCCCTGCATCCGCCGCAAGGC 137438
Query 116989 CGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGC 117048
||| ||||| || ||||| |||| | ||| | |||| | | | || ||||||||
Sbjct 137437 CGACTGGGCCCTCAAGTGGATTGCCGACCACGAGTCGACCTTTGCCCAACGTCTGGTGGC 137378
Query 117049 CTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAA 117108
||| || |||||||| ||| ||||||| |||||| || || |||| ||||||||
Sbjct 137377 CTTTGCCGCCGTCGAAGGCATCTTCTTCTCGGGCGCCTTTGCTTCCATCTTTTGGCTGCG 137318
Query 117109 GAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGG 117168
|| ||||| ||||||||||||||||| || ||||||||| || ||| | ||||||||
Sbjct 137317 CAAGCGCGGTCTCATGCCCGGCCTGACCTTTTCCAACGAGCTGATTTCCCGCGACGAGGG 137258
Query 117169 TCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGC 117228
||||| ||||||||||| |||| ||| ||| | | || || ||| |
Sbjct 137257 CCTGCACACAGACTTTGCCTGCCTGCTCTTCTCGCACCTCAACAACCGCCCCAGCAAGAA 137198
Query 117229 GCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGC 117288
|| | ||| ||| |||||||||| |||||||| || || ||| | ||||| ||
Sbjct 137197 GCTGATTGAGGAAATCATCACCGACGCTGTCGCCATTGAAAAGGAGTTCTTGACCGACGC 137138
Query 117289 GCTGCCGGTGCG-TCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTTCG 117347
||||| |||| |||||| || | || ||| |||| ||| ||||| ||||| |
Sbjct 137137 CCTGCC-CTGCGCTCTGCTCGGCATGAACGCCGACCTGATGAAGCAGTACATTGAGTTTG 137079
Query 117348 TCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCGC 117407
| |||||| | |||||| ||| || | | || ||| |||| | | |||||||
Sbjct 137078 TTGCCGACCGTCTGCTGGTCGCCCTCGGCAACGAAAAGGTCTACCGCTCCACCAACCCCT 137019
Query 117408 TGGACTTTATGAACCTCATCTC 117429
| ||||| ||| | ||||||
Sbjct 137018 TTGACTTCATGGAGAACATCTC 136997
>seq2283
Length=86879
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || || || ||||| || ||||| | || || ||| || ||
Sbjct 41112 ATGCAAATCTTCGTCAAGACTCTTACCGGCAAGACAATCACTCTTGAGGTGGAATCCTCC 41171
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | | | ||| || || | || || |||||||| || ||||||||
Sbjct 41172 GATACCATCGACAATGTGAAGTCGAAGATCCAGGATAAGGAGGGCATTCCTCCGGACCAG 41231
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || || || | |||||| || |||||||| || | || ||||| ||||||||||
Sbjct 41232 CAGCGCCTGATTTTCGCGGGTAAGCAGCTGGAGGATGGCCGTACCCTGTCCGACTACAAC 41291
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
|||||||||||| |||| || || || || |||| || | ||||||
Sbjct 41292 ATCCAGAAGGAGTCCACCCTCCACCTGGTTCTGCGTCTGCGTGGCGGC 41339
Score = 123 bits (136), Expect = 3e-23
Identities = 155/210 (74%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || || || ||||| |||||||| |||| ||||| | |
Sbjct 40884 ATGCAAATCTTCGTCAAGACTCTTACCGGCAAGACCATCACTCTCGAAGTCGAGTCGTCG 40943
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | | | |||| ||||| || || | ||||| ||||| || ||| |||||||
Sbjct 40944 GATACCATTGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGTATTCCCCCGGACCA 41002
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || || || | |||||| || |||||||| || | || ||||| ||||||||
Sbjct 41003 GCAGCGTCTGATTTTCGCGGGTAAGCAGCTGGAGGATGGCCGTACCCTGTCTGACTACAA 41062
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||||||||||||| | || || || || ||
Sbjct 41063 CATCCAGAAGGAGTCTACTCTTCACCTGGT 41092
Score = 120 bits (132), Expect = 3e-22
Identities = 144/196 (73%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 40703 TAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAA 40762
|||| || | |||||||| || |||||| | || || ||| | |||||| | | | |
Sbjct 40385 TAAATACAGTGACGGGCAAGACTATCACCCTTGAGGTGGAATCTTCCGACACCATCGACA 40444
Query 40763 CGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCT 40822
||||| ||| || | ||||| ||||| || ||| |||||||||| || || ||||
Sbjct 40445 ATGTCAAGTCAAAGATCCAGGACAAGGAGGGTATTCCCCCGGACCAGCAGCGTCTGATCT 40504
Query 40823 ACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGG 40882
|| || || |||||||| |||| || ||||| |||||| |||||||||||||||
Sbjct 40505 TTGCTGGAAAGCAGCTGGAGGACGGCCGTACCCTGTCCGACTATAACATCCAGAAGGAGT 40564
Query 40883 CCACGCTGCATCTAGT 40898
|||| || || || ||
Sbjct 40565 CCACTCTCCACCTGGT 40580
Score = 113 bits (124), Expect = 5e-20
Identities = 149/204 (73%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 40696 ATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGC 40755
||| |||| || || ||||| ||||| |||||||| |||| ||||| | | || | |
Sbjct 40662 ATAGTCGTCAAGACCCTCACCGGCAAGACCATCACTCTCGAAGTCGAGTCGTCGGATACC 40721
Query 40756 GTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACG 40814
| | |||| ||||| || || | || || |||||||| || |||||||||| ||
Sbjct 40722 ATTGACAACG-TCAAGTCCAAGATCCAGGATAAGGAGGGCATTCCTCCGGACCAGCAGCG 40780
Query 40815 ACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCA 40874
|| |||| || || || |||||||| |||| || ||||| ||||||||||||||
Sbjct 40781 TCTGATCTTTGCTGGAAAGCAGCTGGAGGACGGCCGTACCCTGTCTGACTACAACATCCA 40840
Query 40875 GAAGGAGGCCACGCTGCATCTAGT 40898
||||||| | || || || || ||
Sbjct 40841 GAAGGAGTCTACTCTTCACCTGGT 40864
>seq335
Length=221524
Score = 123 bits (136), Expect = 3e-23
Identities = 151/205 (74%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| ||||| || ||||| || || || ||||| || || || ||| |||| || || ||
Sbjct 117241 AAGATGCAGATTTTCGTCAAGACCCTGACGGGTAAGACGATTACCCTCGAGGTTGAGTCC 117182
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
| |||| | | | ||||| || |||| ||||| |||||||| ||| |||||
Sbjct 117181 TCGGACACTATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCGGAC 117122
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
||||| || || |||| ||| ||||| |||||||| || | ||||| || ||||||
Sbjct 117121 CAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACTCTGTCTGACTAC 117062
Query 40867 AACATCCAGAAGG--AGGCCACGCT 40889
||||||||||||| || |||||||
Sbjct 117061 AACATCCAGAAGGTCAGTCCACGCT 117037
>seq1473
Length=183801
Score = 109 bits (120), Expect = 6e-19
Identities = 135/182 (74%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758
||||| || || || ||||| || ||||| ||| | || ||||| || | |||| |
Sbjct 105214 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTGGAGGTCGAGTCCTCGGACACGATC 105155
Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817
| |||| ||||| || || | ||||| |||||||| ||| |||||||||| || ||
Sbjct 105154 GACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCT 105096
Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877
|||| || ||||| ||||| || || | |||||||| |||||||||||| |||||
Sbjct 105095 GATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTGTCCGACTACAACATTCAGAA 105036
Query 40878 GG 40879
||
Sbjct 105035 GG 105034
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515204290844400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |