Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04- 03] 2,315 sequences; 28,117,660 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq335 127 2e-24 seq1092 105 6e-18 seq1473 104 2e-17 seq2283 98.7 9e-16 >seq335 Length=221524 Score = 127 bits (140), Expect = 2e-24 Identities = 141/188 (75%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610 || || |||||||| || || |||||| |||||| ||||| || |||||| |||| Sbjct 117051 TTCTGGATGTTGTAGTCAGACAGAGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATC 117110 Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670 ||||||||||| || || || |||||||||||||| ||| || || || | ||| Sbjct 117111 AGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCG 117170 Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 118730 | ||||||| | ||| ||||||| ||| | ||| || || ||||| || || || ||| Sbjct 117171 ATAGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTCAGGGTCTTGACGAAA 117230 Query 118731 ATCTGCAT 118738 |||||||| Sbjct 117231 ATCTGCAT 117238 >seq1092 Length=189081 Score = 105 bits (116), Expect = 6e-18 Identities = 342/523 (65%), Gaps = 21/523 (4%) Strand=Plus/Minus Query 44785 TATGCCCTGCGTGCGCAGAAAGGCCGAATGGGCGATGAAGTATATTGACGATGAAAAGAT 44844 ||| |||||| | ||| | |||||||| ||||| | |||| |||| ||| | || Sbjct 137461 TATTCCCTGCATCCGCCGCAAGGCCGACTGGGCCCTCAAGTGGATTGCCGACCACGAGTC 137402 Query 44845 AACTTTGGCCGAACGATTGGTCGCATTCGCCATTGTCGAAGGAGTGTTCTTTTCGGGGAG 44904 || || ||| |||| |||| || || ||| |||||||| | ||||| ||||| Sbjct 137401 GACCTTTGCCCAACGTCTGGTGGCCTTTGCCGCCGTCGAAGGCATCTTCTTCTCGGGCGC 137342 Query 44905 TTTTGCGGCGATATTTTACATGAAAACCAAGGGAG---TGATGCCCGGACTGACGTTTAG 44961 ||||| | || |||| || |||| | | | |||||||| ||||| ||| Sbjct 137341 CTTTGCTTCCATCTTTTGGCTGCG---CAAGCGCGGTCTCATGCCCGGCCTGACCTTTTC 137285 Query 44962 CAACGAATTGATTTCGAGAGACGAAGGTCTGCACACCAACTTTGCCTGCCTCTACTATAA 45021 |||||| ||||||| | ||||| || |||||||| ||||||||||| || || | Sbjct 137284 CAACGAGCTGATTTCCCGCGACGAGGGCCTGCACACAGACTTTGCCTGC--CTGCTCTTC 137227 Query 45022 TACGAGAGTCGATCAAAAGTTGGACGCGCCCACC--GTCAACGACATGTTCTCCGAAGCC 45079 | || || | ||| | | || | | | | || || || |||| || Sbjct 137226 T-CGCACCTC-AACAACCGCCCCA-GCAAGAAGCTGATTGAGGAAATCATCACCGACGCT 137170 Query 45080 GTGGCCATCGAGATGGAATTTTTTGCTGAGGCTCTGCCCGAATCGTTGGTGGGAATGAAC 45139 || ||||| || | ||| || || | || || |||||| | || | || |||||| Sbjct 137169 GTCGCCATTGAAAAGGAGTTCTTGACCGACGCCCTGCCCTGCGCTCTGCTCGGCATGAAC 137110 Query 45140 GCGAATATGATGAGAAAGTACATTGAGTTTGTCGCCGATCGTCTTCTCGT----CCAGTT 45195 || | |||||| |||||||||||||||| ||||| ||||| || || | | Sbjct 137109 GCCGACCTGATGAAGCAGTACATTGAGTTTGTTGCCGACCGTCTGCTGGTCGCCCTCGGC 137050 Query 45196 AAAGTATCCCAAGATGTACTATACTGAGAACCCATTCGAGTTTATGAACAATATTTCGTT 45255 || | | ||| | ||| | ||||| || || || ||| | || || ||| | Sbjct 137049 AACGAA----AAGGTCTACCGCTCCACCAACCCCTTTGACTTCATGGAGAACATCTCGCT 136994 Query 45256 GGAGGGCAAAACTAAtttttttGAGAAACGCGTCGGCGAATAC 45298 | ||||| || || || || ||||| || |||||||| ||| Sbjct 136993 CGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGCGACTAC 136951 >seq1473 Length=183801 Score = 104 bits (114), Expect = 2e-17 Identities = 131/180 (73%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610 || ||||||||||| ||| || ||||| |||||| ||||| || ||||| |||| Sbjct 105036 TTCTGAATGTTGTAGTCGGACAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATC 105095 Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670 ||||||||||| || || || |||||||||||||| || || || || | ||| Sbjct 105096 AGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCG 105155 Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 118730 | ||||||| | ||||||||| | ||| | || || || ||||| || || || ||| Sbjct 105156 ATCGTGTCCGAGGACTCGACCTCCAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAAA 105215 >seq2283 Length=86879 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||| | |||||||| || || |||||||| || || || || |||||| Sbjct 41092 ACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCATCCTCC 41033 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || ||| | || ||||||||||| || || || || ||||||||||| Sbjct 41032 AGCTGCTTACCCGCGAAAATCAGACGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGG 40973 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | || | ||| |||| |||||| |||| || | || ||| Sbjct 40972 ATCTTGGACTTGACGTTGTCAATGGTATCCGACGACTCGACTTCGAGAGTGATGGTCTTG 40913 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| ||||| || || || || ||||| Sbjct 40912 CCGGTAAGAGTCTTGACGAAGATTTGCAT 40884 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||||| || ||||| || || |||||||| ||| || || || |||||| Sbjct 41320 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCCATCCTCC 41261 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || ||| | || || |||||||| || ||||| ||||||||||| || Sbjct 41260 AGCTGCTTACCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTATCCTGG 41201 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| ||| || | | || ||||| | || | || ||| Sbjct 41200 ATCTTCGACTTCACATTGTCGATGGTATCGGAGGATTCCACCTCAAGAGTGATTGTCTTG 41141 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| ||||| || || || || ||||| Sbjct 41140 CCGGTAAGAGTCTTGACGAAGATTTGCAT 41112 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||| | |||||||| || || |||||||| || || || || ||||| Sbjct 40864 ACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCGTCCTCC 40805 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| |||||||| |||| ||||||||||| || ||||| ||||||||||| || Sbjct 40804 AGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTATCCTGG 40745 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | || | ||| |||| |||||| |||| || | || ||| Sbjct 40744 ATCTTGGACTTGACGTTGTCAATGGTATCCGACGACTCGACTTCGAGAGTGATGGTCTTG 40685 Query 118710 CCGGTCAGAGTTTTTAC 118726 ||||| || || || || Sbjct 40684 CCGGTGAGGGTCTTGAC 40668 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||||| || ||||| || || ||||| || ||| || || || ||||| Sbjct 40580 ACCAGGTGGAGAGTGGACTCCTTCTGGATGTTATAGTCGGACAGGGTACGGCCGTCCTCC 40521 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| |||||||| |||| ||||||||||| || || || || ||||||||||| Sbjct 40520 AGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGG 40461 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || ||| || || | |||| |||||| | || ||||| | ||| | || ||| Sbjct 40460 ATCTTTGACTTGACATTGTCGATGGTGTCGGAAGATTCCACCTCAAGGGTGATAGTCTTG 40401 Query 118710 CCGGTCAGAGTTTTTA 118725 || |||| || |||| Sbjct 40400 CCCGTCACTGTATTTA 40385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433818159881980