Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq2283 111 2e-19
seq335 95.1 1e-14
seq1473 87.8 2e-12
>seq2283
Length=86879
Score = 111 bits (122), Expect = 2e-19
Identities = 142/193 (74%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| || || ||||| |||| ||| || || | || || ||||||||||| |||||
Sbjct 41075 CTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTGCTTACCCGCGAA 41016
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| || ||||||||||| | || | | |||||||||| ||| || |||| |||
Sbjct 41015 AATCAGACGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 40957
Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170
| | | || || ||| || || |||| |||||||| ||||| || || ||||| |
Sbjct 40956 TGTCAATGGTATCCGACGACTCGACTTCGAGAGTGATGGTCTTGCCGGTAAGAGTCTTGA 40897
Query 43171 CAAAGATTTGCAT 43183
| |||||||||||
Sbjct 40896 CGAAGATTTGCAT 40884
Score = 102 bits (112), Expect = 9e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027
||||| |||| || | ||| |||||| || || ||||| || | ||| || || |
Sbjct 41327 ACGCAGAACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCC 41268
Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087
|| || ||||||||||| ||||| || || ||||||||||| | || | || ||||||
Sbjct 41267 ATCCTCCAGCTGCTTACCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTT 41208
Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147
||| ||| || || | | | | || ||| |||||||| || | |||||
Sbjct 41207 ATCCTGGATCTTCGACTTCACATTGTCGATGGTATCGGAGGATTCCACCTCAAGAGTGAT 41148
Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| ||||| || || ||||| || |||||||||||
Sbjct 41147 TGTCTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 41112
Score = 95.1 bits (104), Expect = 1e-14
Identities = 131/181 (72%), Gaps = 2/181 (1%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| || || ||||| |||| ||| || || |||| || |||||||| ||||| ||
Sbjct 40847 CTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCGTCCTCCAGCTGCTTTCCAGCAAA 40788
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| || ||||||||||| | || | || |||||| ||| ||| || |||| |||
Sbjct 40787 GATCAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTATCCTGGATCTTGGACTTGA-CGT 40729
Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170
| | | || || ||| || || |||| |||||||| ||||| || || ||||| |
Sbjct 40728 TGTCAATGGTATCCGACGACTCGACTTCGAGAGTGATGGTCTTGCCGGTGAGGGTCTTGA 40669
Query 43171 C 43171
|
Sbjct 40668 C 40668
Score = 89.7 bits (98), Expect = 6e-13
Identities = 127/179 (71%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| || || || || || | ||| || || |||| || |||||||| ||||| ||
Sbjct 40563 CTCCTTCTGGATGTTATAGTCGGACAGGGTACGGCCGTCCTCCAGCTGCTTTCCAGCAAA 40504
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| || ||||||||||| | || | | |||||||||| ||| ||| |||| |
Sbjct 40503 GATCAGACGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTTGACTTGACATT 40444
Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170
| | |||||| |||||||| || | ||||| || |||||||| | || ||||
Sbjct 40443 GTCGATGGTGTCGGAAGATTCCACCTCAAGGGTGATAGTCTTGCCCGTCACTGTATTTA 40385
>seq335
Length=221524
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/194 (72%), Gaps = 2/194 (1%)
Strand=Plus/Plus
Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053
|||| || || ||||| |||| |||||| || | || || |||||||| |||||||| |
Sbjct 117049 CCTTCTGGATGTTGTAGTCAGACAGAGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGA 117108
Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTC 43112
| || ||||||||||| | || | || |||||||||| ||| | || | |||| |
Sbjct 117109 TCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC-TGAATCTTGGACTTGACATTG 117167
Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172
| | ||||| || || || |||| || || || || ||||| || ||||| ||
Sbjct 117168 TCGATAGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTCAGGGTCTTGACG 117227
Query 43173 AAGATTTGCATTTT 43186
|| || ||||| ||
Sbjct 117228 AAAATCTGCATCTT 117241
>seq1473
Length=183801
Score = 87.8 bits (96), Expect = 2e-12
Identities = 130/182 (71%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053
|||| ||||| ||||| || | ||| || || | || || |||||||| ||||| || |
Sbjct 105034 CCTTCTGAATGTTGTAGTCGGACAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGA 105093
Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113
| || ||||||||||| | || | || |||||||||| ||| || |||| ||| |
Sbjct 105094 TCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTG 105152
Query 43114 -CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172
| | |||||| || || || || | || ||||| || ||||| || ||||| ||
Sbjct 105153 TCGATCGTGTCCGAGGACTCGACCTCCAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 105212
Query 43173 AA 43174
||
Sbjct 105213 AA 105214
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571801053028200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |