Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04- 03] 2,315 sequences; 28,117,660 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq1628 87.8 4e-12 >seq1628 Length=158365 Score = 87.8 bits (96), Expect = 4e-12 Identities = 108/148 (73%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 254020 ACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAACCCTGTTGG 254079 |||| |||||||| || ||||||||||| || || || ||||| || ||| | | | | Sbjct 71782 ACGGGCCTCCCGGCACGGGCAAGACGTCTACGATTCTAGCGCTTGCGCGACGCATCTACG 71841 Query 254080 GCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCTGACGAACGCGGGTTGG 254139 ||| || |||||| | || ||||| || || || || || ||||| ||||| | | Sbjct 71842 GCGCGGAAAACATGCGGCAGATGGTGCTGGAACTCAATGCATCGGACGACCGCGGCATCG 71901 Query 254140 ACGTCGTCCGCGACAAGATCAAGACTTT 254167 |||| || || || |||||||||| || Sbjct 71902 ACGTAGTGCGTGAGCAGATCAAGACGTT 71929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073734551081920