Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04- 03] 2,315 sequences; 28,117,660 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq1750 396 2e-105 seq1092 280 1e-70 seq335 114 1e-20 seq2283 96.9 3e-15 >seq1750 Length=138661 Score = 396 bits (438), Expect = 2e-105 Identities = 1245/1899 (66%), Gaps = 57/1899 (3%) Strand=Plus/Minus Query 22104 TCTTG-TCCACTGTAAACTGTAT-GGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACAT 22161 ||||| || || |||||||| || |||| || || | | || || || || ||||| Sbjct 36839 TCTTGGTCAACAGTAAACTGAATAGGCGCC-GCAGCAGCCTGAGTACGCAGGTAGTACAT 36781 Query 22162 GCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTT--CCATAA 22219 ||||||||| ||||||| |||||| || ||| || || || ||| || |||| Sbjct 36780 GCCCGTCTTGAGACCCAGCTTCCAGCCGGCAAAGTGCATGCTGGT-AATCTTGCCCATGG 36722 Query 22220 CTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCG 22279 | || | ||||| | |||| |||||| ||| |||||||| || || || ||| Sbjct 36721 -TAGGGTCCTTCATGTGAATGTTGAGCGACTGCGACTGGTCGATAAAGGCACCACGGTCG 36663 Query 22280 GCGGCCATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTG 22339 || ||||| | | || || ||| ||| || ||||| || ||||||||||| | || Sbjct 36662 GCAGCCATCTGCACCACCGTGCGCTGCGAAATCTCCCACACTGTCTTGTACAGAGCCTTG 36603 Query 22340 ATCTCTAACGGTATCGATTCGA-TCCTCTGGACGGACCCGTTATTGTGTATGATCAAATT 22398 || || || || | | || | |||| | || ||||| | | || || || Sbjct 36602 ATGTCGTCGGGAAT-GCTGGGAATGTTCTGAATAGAACCGTTCTCGGCAATAATGCGGTT 36544 Query 22399 TTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGAC-CAGATGAC---GGT 22454 || || |||| ||||| ||| | |||||| | || ||| | | ||| Sbjct 36543 CTTCATGTTATCAGACCACAGACCCA----GGTCAACCAGGTCACGCAGCAGCCACGGGT 36488 Query 22455 TCACCACTTGAAACTCGCCGGACAAG-ACGCGGCGTTGGTAAATGTTGGATGTGAACGGT 22513 |||| || || ||||| |||| |||| || || || |||||||||||||| ||| |||| Sbjct 36487 TCACAACCTGGAACTCACCGG-CAAGCACACGACGCTGGTAAATGTTGGAAGTGTACGGC 36429 Query 22514 TCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAAC 22573 || || | |||||||| ||||| ||||| | || || || ||||| || |||| | Sbjct 36428 TCAAAGCACTCATTGTTGCCCAGAATCTGCGACGTGCTGGCCGTAGGCATGGGAGCCAGC 36369 Query 22574 AGTAGCGAGTTTCTCAAGCCGTGCT--TTGAAATTTTACTC-TTGAGCATCGACCAGTCC 22630 || |||||||| | || ||||||| |||| | | ||| |||||| | ||||||| Sbjct 36368 AGCAGCGAGTTGCGCACACCGTGCTGCTTGA---TCTGCTCCTTGAGCGAAGCCCAGTCC 36312 Query 22631 CACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCC--GCGACTCG 22688 || || || || || ||||| |||||| || | |||| | ||| |||| | Sbjct 36311 CAGAGGTCACTGGGAGTGACATT---CCACATGTCAAACTGCAGGATGCCCTGCGAAACA 36255 Query 22689 CCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCT 22748 || || ||||| || ||||| || | | ||||| || | |||| Sbjct 36254 --GGCGAACCCTCGTAGGTCGAGTACGTGCCCTCCTCCTTGGCAATCTCCATGGACGCCG 36197 Query 22749 CCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCG---GCGGCGGC-G 22804 || || ||| || |||||||| ||||| | |||| | | | || |||| | Sbjct 36196 TCAGGGCAGCGTGGTAAATAGTCTCAAAGATCTGAGTGTTGAGCTTGCGAGCCTCGGCCG 36137 Query 22805 ACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATA 22864 || || |||||||||| | || || || || |||| |||||| || || | Sbjct 36136 AC----TCAAACGGCATACGTAGAGCCAAAAAGGCATCAGCCAGACCCTGGACACCAACG 36081 Query 22865 CCGATCGGTCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAA 22924 || || || |||| || || | ||||||||||| ||| || ||| | Sbjct 36080 CCAATAGGACGGTGGCGCATGTTGCTGTTGTGTGCCTCGGGCACAGGGTAGTGATTGACA 36021 Query 22925 TCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAG 22984 || || | | ||||| || | ||| | || || | | ||| Sbjct 36020 TCAATGATGCGGTTCAGATTGCGCACCACCACCTTGGTGACATCGTGCAGCTTCTGGAAG 35961 Query 22985 TCGTAAACG--CCCGATTGTA--CAACAAACTTGTTGACGGCG--ATCGAGGCAAGATTG 23038 ||||| | | || | ||| |||||||| | || | ||| | |||||| || ||| Sbjct 35960 TCGTAGCGGTTCTCGCT-GTAGTCAACAAAC--GATGGCAGCGCCAGCGAGGCCAGGTTG 35904 Query 23039 CATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACAC 23098 || || || ||||| || || |||||| | ||| || || || || ||| | Sbjct 35903 CACACAGCAACCTCATCAGGGGCACAGTACTCGATAATCTCAGTGCACAGGTTGGAGCTG 35844 Query 23099 TTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATG 23158 || || |||| ||| | |||||||| || || ||||| |||||||| ||||| Sbjct 35843 CGAATGGTACCCAGATTCTTTTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAGCATA 35784 Query 23159 TACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGA 23218 |||| |||| |||||| ||| | ||| | || || ||||| |||| || | Sbjct 35783 AACGGGTTGCCAGTCTCGGTCTGGGCCTCCAAAATGGCATACCACAGCTTCTGGGCCTTG 35724 Query 23219 ACACGTCGCACGTAC-CTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGC 23277 || || | || | | ||| || | ||||||||||| ||||| || |||||||| | Sbjct 35723 AC-CGACTGCCGACCACGGCCCTCCTTCTCGTACTTTTCGTACAGAGCCTCAAATTCCTC 35665 Query 23278 ACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTC 23337 ||||| ||||| |||||||| || | | | |||||||| || |||| | || Sbjct 35664 GCCGTAGCAGTCAGCCAGGCCAGGGCACTCGTTGGGACACATCAGGGTCCAGTTCTCGTT 35605 Query 23338 ATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGC 23397 || || || || |||| || | || || ||||| ||||| |||||| || ||||| Sbjct 35604 CTTCTCGACACGCTTCATGAACATGTCGGGAATCCACAGAGCTAGGAACAGGTCACGGGC 35545 Query 23398 GCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATG 23457 ||| |||||||| || || ||||| || || | || || ||||| || || || Sbjct 35544 GCGGACCTCCTCCTTACCATGATTCTTGCGCAGGTCAAGGAACTCAAACACATCGGCGTG 35485 Query 23458 CCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTA 23517 ||||||||| ||||||| |||||| || || || | ||| ||||||||||| ||||| || Sbjct 35484 CCACGGCTCCAGGTAAATGGCAAAAGCACCAGGGCGCTTGTTGCCGCCCTGGTCGACATA 35425 Query 23518 ACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTAC 23577 ||||| ||||||||| |||| | ||||| || | | |||||||| | ||| Sbjct 35424 GCGGGCAGTGTTGTTGAACACGCGCAGCATGGGGATAATGCCGTTGGAGGTACCGTTGGT 35365 Query 23578 GCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCC 23637 || || | ||| || | || || | |||||| | || || || || || | Sbjct 35364 ACCAGCAATGTACGAGCCAGTGGCGCGGATACGGTGAACATTGAGGCCGATACCACCAGC 35305 Query 23638 CGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTC 23697 | || || ||||| || || || ||||| ||||| ||||| || || |||||| Sbjct 35304 CATCTTGGAAATCATAGCACAAGTCTTGAGAGTATCGTAAATGCCTTCAATCGAGTCCTC 35245 Query 23698 TTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAG 23757 || | | |||| || || || |||| || || | || ||| | || |||||| Sbjct 35244 CTTCATGTCAACCAGAAAGCAAGATGACAGCTGGGCCTGAGGAGTACCAGCGTTGAACAG 35185 Query 23758 TGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATG--GCG 23815 || || |||||| |||||| | ||||||| || |||||||| || ||| ||| Sbjct 35184 AGTGGGCGAGGCGTGAGTAAAGAACTTGCTCGACATGAGGTTGTACGTCTCAATGACGCG 35125 Query 23816 G-CATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCT 23874 | | | |||| | | | || || | || || ||||| ||||||| || || | Sbjct 35124 GTCGACTCTGTCACCCCAG---ATGCCAACAGCCACACGCATAATCATGTGCTGGGGACG 35068 Query 23875 CTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAA 23934 |||||| | ||||| | || | ||| || ||||| | || || || || ||||| Sbjct 35067 CTCGACAATCTTGCCGTCCAACTTCAGCAGGTACGAACGCTCCAGGGTCTTGAAGCCAAA 35008 Query 23935 ATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGA 23973 || | ||||||||||||||||||| ||| ||||| || Sbjct 35007 GTACTGGTAGTTAAAGTCACGATCGTACACAATGGCAGA 34969 >seq1092 Length=189081 Score = 280 bits (310), Expect = 1e-70 Identities = 595/875 (68%), Gaps = 31/875 (4%) Strand=Plus/Minus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | |||||||||||||| || || || || ||||| | ||| || | |||||| Sbjct 137793 ATCTGGCAAATGTACAAAAAGGCCGAGGCGTCCTTCTGGACTGCCGAGGAGATTGACCTG 137734 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCCTCA--AAGAATCTGA-GAGAAAT--TTTATTA 57684 || ||||| ||| ||| ||| | || || || || || || || | || || Sbjct 137733 TCCAAGGACCTGCACGACTGGAACAACCGCATGAACAAG--GACGAAAAGTACTTCATCT 137676 Query 57685 AACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAA 57744 |||||| |||| || || ||||| || || || ||||| |||||||| ||||||| Sbjct 137675 CGCACGTGCTGGCCTTCTTTGCCGCGTCGGACGGCATTGTCAACGAGAACCTGGTCGAGC 137616 Query 57745 GATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCA 57804 | || || || || || | | ||||| | ||||| ||||| ||||| | | Sbjct 137615 GCTTCTCGGGCGAGGTCCAGATCCCCGAGGCCCGCTGCTTCTACGGCTTTCAGATCATGA 137556 Query 57805 TTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACG 57864 | || ||| | || || || | || ||||| || || || |||||| | ||||| || Sbjct 137555 TGGAGAACATCCACTCCGAGACATACTCGCTGCTGATTGACACGTACATCAAGGAGCCCG 137496 Query 57865 ACGAGAAACGTAGA---CTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGG 57921 | || || || ||||| ||||| || || || || ||| ||| | |||| Sbjct 137495 CCCAG---CGCAGCTACCTGTTTAACGCCATTGATACTATTCCCTGCATCCGCCGCAAGG 137439 Query 57922 CAGAGTGGTCAATCAAATGGATAAAAAGCG-CCACGG--CCACGTTCGCCGAGAGGCTAA 57978 | || ||| | |||| ||||| || ||||| | || || ||| | | || Sbjct 137438 CCGACTGGGCCCTCAAGTGGATTGC---CGACCACGAGTCGACCTTTGCCCAACGTCTGG 137382 Query 57979 TCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGA 58038 | || || |||||||||||||| || ||||| |||||| |||||| | || |||||| Sbjct 137381 TGGCCTTTGCCGCCGTCGAAGGCATCTTCTTCTCGGGCGCCTTTGCTTCCATCTTTTGGC 137322 Query 58039 TGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACG 58098 || || ||||| || |||||||||||||| ||| ||||||| |||| || ||||||| Sbjct 137321 TGCGCAAGCGCGGTCTCATGCCCGGCCTGACCTTTTCCAACGAGCTGATTTCCCGCGACG 137262 Query 58099 AGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGC 58158 |||| || || || || ||||| ||||| | | ||| ||| |||| ||||| | | Sbjct 137261 AGGGCCTGCACACAGACTTTGCCTGCCTGCTCTTCTCGCAC---CTCAA-CAACCGCCCC 137206 Query 58159 ----GGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTC 58214 | | | || ||| || |||||||| || ||||| || ||||| ||||| | Sbjct 137205 AGCAAGAAGCTGATTGAGGAAATCATCACCGACGCTGTCGCCATTGAAAAGGAGTTCTTG 137146 Query 58215 ACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATT 58274 ||||| ||||| || || ||||||| |||||| || ||||| |||||||| Sbjct 137145 ACCGACGCCCTGCCCTGCGCTCTGCTCGGCATGAACGCCGACCTGATGAAGCAGTACATT 137086 Query 58275 GAGTTTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTCATTACAACACGA 58332 ||||||||||||||| | || || ||| || | || | ||| ||| | | | Sbjct 137085 GAGTTTGTTGCCGACCGTCTGCTGGTCGCCCTCGGCAACGAAAAGGTC--TACCGCTCCA 137028 Query 58333 AAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaa 58392 || || ||||| || ||| | |||||||||| |||||||| ||||| ||||| | Sbjct 137027 CCAACCCCTTTGACTTCATGGAGAACATCTCGCTCGGCGGCAAGACCAACTTCTTCGAGA 136968 Query 58393 aaaaaGTTAGCGAATATCAAAAATACGGCGTGATG 58427 | || |||| || ||||| ||| ||| || Sbjct 136967 AGCGTGTCGGCGACTACCAAAAGGCCGGTGTGCTG 136933 >seq335 Length=221524 Score = 114 bits (126), Expect = 1e-20 Identities = 120/158 (76%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| |||||||| ||||| ||||| || || ||||| ||| |||| ||||| | Sbjct 117241 AAGATGCAGATTTTCGTCAAGACCCTGACGGGTAAGACGATTACCCTCGAGGTTGAGTCC 117182 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || |||| | |||| | ||||| | || ||||||||| ||| | || || ||| Sbjct 117181 TCGGACACTATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCGGAC 117122 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 ||||||||||| || ||||||||||| ||| |||| || Sbjct 117121 CAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAGGA 117084 >seq2283 Length=86879 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/200 (72%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 31206 TAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAAA 31265 |||| || |||| ||||| || |||||| | || || ||| | ||||||| |||| | Sbjct 40385 TAAATACAGTGACGGGCAAGACTATCACCCTTGAGGTGGAATCTTCCGACACCATCGACA 40444 Query 31266 CGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATA 31324 ||||| || ||| | ||||||||| || | || || |||||||||||||| || Sbjct 40445 ATGTCAAGTCAAAGA-TCCAGGACAAGGAGGGTATTCCCCCGGACCAGCAGCGTCTGATC 40503 Query 31325 TTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAA 31384 || ||||| || ||| |||| ||| || || ||| |||||||| || || || Sbjct 40504 TTTGCTGGAAAGCAGCTGGAGGACGGCCGTACCCTGTCCGACTATAACATCCAGAAGGAG 40563 Query 31385 TCGACTCTTCATCTGGTACT 31404 || ||||| || ||||| || Sbjct 40564 TCCACTCTCCACCTGGTTCT 40583 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| |||||||| || ||||| || ||||| |||| || || |||| Sbjct 40884 ATGCAAATCTTCGTCAAGACTCTTACCGGCAAGACCATCACTCTCGAAGTCGAGTCGTCG 40943 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | || | ||||| | || ||||||||| || | || || |||||| Sbjct 40944 GATACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATTCCCCCGGACCAG 41003 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || ||||| || || ||| |||| || || || || || ||| Sbjct 41004 CAGCGTCTGATTTTCGCGGGTAAGCAGCTGGAGGATGGCCGTACCCTGTCTGACTACAAC 41063 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || || || |||||||| ||||| || Sbjct 41064 ATCCAGAAGGAGTCTACTCTTCACCTGGTTCT 41095 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| |||||||| || ||||| || ||||| | || || ||| | ||| Sbjct 41112 ATGCAAATCTTCGTCAAGACTCTTACCGGCAAGACAATCACTCTTGAGGTGGAATCCTCC 41171 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||| | || || || || ||| ||||| ||| | || || |||||| Sbjct 41172 GATACCATCGACAATGTGAAGTCGAAGATCCAGGATAAGGAGGGCATTCCTCCGGACCAG 41231 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||| || || ||| |||| || || || ||| || ||| Sbjct 41232 CAGCGCCTGATTTTCGCGGGTAAGCAGCTGGAGGATGGCCGTACCCTGTCCGACTACAAC 41291 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || || || || || || || || ||||| || | ||| | ||||| Sbjct 41292 ATCCAGAAGGAGTCCACCCTCCACCTGGTTCTGCGTCTGCGTGGCGG 41338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445753500634800