Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04- 03] 2,315 sequences; 28,117,660 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq1750 96.9 7e-15 >seq1750 Length=138661 Score = 96.9 bits (106), Expect = 7e-15 Identities = 187/271 (69%), Gaps = 4/271 (1%) Strand=Plus/Minus Query 94774 TGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTA 94833 |||| | || ||||| || ||||| ||||||| || || || ||| |||||| Sbjct 35330 TGAACATTGAGGCCGATACCACCAGCCATCTTGGAAATCATAGCACAAGTCTTGAGAGTA 35271 Query 94834 TCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGG 94893 || ||||| || ||||| || || | | | | | || ||||| || || || ||| Sbjct 35270 TCGTAAATGCCTTCAATCGAGTCCTCCTTCATGTCAACCAGAAAGCAAGATGACAGCTGG 35211 Query 94894 GGTGTGACT-GTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGA 94952 | ||| || ||| || ||||| ||||| || || || ||||| | | ||||| Sbjct 35210 GCC-TGAGGAGTACCAGCGTTGAACAGAGTGGGCGAGGCGTGAGTAAAGAACTTGCTCGA 35152 Query 94953 CATGAGATCATATGTTTCAATGACAGATTTGA-TGTCTGATCCGTGAATGCCGACAGCCA 95011 |||||| | || || |||||||| | || | | | | || || |||| ||||||| Sbjct 35151 CATGAGGTTGTACGTCTCAATGACGCGGTCGACTCTGTCACCCCAGA-TGCCAACAGCCA 35093 Query 95012 CACGCATAATCATGTCCTGAGGGCGCTCAAC 95042 ||||||||||||||| ||| || ||||| || Sbjct 35092 CACGCATAATCATGTGCTGGGGACGCTCGAC 35062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989554648010825