Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq1750 156 5e-33
>seq1750
Length=138661
Score = 156 bits (172), Expect = 5e-33
Identities = 456/698 (65%), Gaps = 16/698 (2%)
Strand=Plus/Minus
Query 63221 AGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAA 63280
||| || || | |||||||||| | ||| | ||| | || || || ||||| ||
Sbjct 35643 AGGGCACTCGTTGGGACACATCAGGGTCCAGTTCTCGTTCTTCTCGACACGCTTCATGAA 35584
Query 63281 GAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGT 63340
| || |||||||| ||||||| || || || | | | ||||| || ||
Sbjct 35583 CATGTCGGGAATCCACAGAGCTAGGAACAGGTCACGGGCGCGGACCTCCTCCTTACCATG 35524
Query 63341 ATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGC 63400
|||||| || || |||||| | | | ||| | |||||||| |||| ||| |||||
Sbjct 35523 ATTCTTGCGCAGGTCAAGGAACTCAAACACATCGGCGTGCCACGGCTCCAGGTAAATGGC 35464
Query 63401 CATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAAC 63460
| | | ||||| || ||||| || ||||| || | || | || ||||| || | ||
Sbjct 35463 AAAAGCACCAGGGCGCTTGTTGCCGCCCTGGTCGACATAGCGGGCAGTGTTGTTGAACAC 35404
Query 63461 TCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACT 63520
| || ||| || ||||| ||||| || |||| |||||||| | || || ||| |
Sbjct 35403 GCGCAGCATGGGGATAATGCCGTTGGAGGTACCGTTGGTACCAGCAATGTACGAGCCAGT 35344
Query 63521 GGCACGAATATTACTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 63578
||| || ||| || |||| | || || || || ||||| || || || | ||
Sbjct 35343 GGCGCGGATACGGTGAACATTGA--GGCCGATACCACCAGCCATCTTGGAAATCATAGCA 35286
Query 63579 CATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAA 63638
|| || | || || || |||||||| || || || |||||| || |||||
Sbjct 35285 CAAGTCTTGAGAGTATCGTAAATGCCTTCAATCGAGTCCTCCTTCATGTCAACCAGAAAG 35226
Query 63639 CAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTA 63698
|| |||| ||| ||| ||| || || || || | || || || ||||| |||
Sbjct 35225 CAAGATGACAGCTGGGCCTGAGGAGTACCAGCGTTGAACAGAGTGGGCGAGGCGTGAGTA 35166
Query 63699 AACCATTTTTCAGAAAGTAGATTGTACGTCTCAAT-----AGCTGAGTCTAT-ATCCCAT 63752
|| | || || | || |||||||||||||| | || ||| | | ||||
Sbjct 35165 AAGAACTTGCTCGACATGAGGTTGTACGTCTCAATGACGCGGTCGACTCTGTCACCCCA- 35107
Query 63753 TGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTG 63812
|||| || || || |||||||| | ||||||||| || | || ||||| ||| |
Sbjct 35106 -GATG----CCAACAGCCACACGCATAATCATGTGCTGGGGACGCTCGACAATCTTGCCG 35052
Query 63813 TTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 63872
| | |||| || ||| || |||| || || || ||||| || | ||| ||||
Sbjct 35051 TCCAACTTCAGCAGGTACGAACGCTCCAGGGTCTTGAAGCCAAAGTACTGGTAGTTAAAG 34992
Query 63873 TCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTT 63910
|| || ||||| | ||| | || | |||| ||||||
Sbjct 34991 TCACGATCGTACACAATGGCAGAGTCCAGCTCATCCTT 34954
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629799374653200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |