Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq1750 150 2e-31
seq1092 102 1e-16
>seq1750
Length=138661
Score = 150 bits (166), Expect = 2e-31
Identities = 456/700 (65%), Gaps = 16/700 (2%)
Strand=Plus/Minus
Query 66012 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 66071
||||| || || | |||||||||| | ||| | ||| | || || || |||||
Sbjct 35645 CCAGGGCACTCGTTGGGACACATCAGGGTCCAGTTCTCGTTCTTCTCGACACGCTTCATG 35586
Query 66072 AAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCT 66131
|| | || |||||||| ||||||| || | || | || | ||||| || ||
Sbjct 35585 AACATGTCGGGAATCCACAGAGCTAGGAACAGGTCACGGGCGCGGACCTCCTCCTTACCA 35526
Query 66132 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATG 66191
|||||| || || |||||| | | | ||| |||||||| |||| ||| |||
Sbjct 35525 TGATTCTTGCGCAGGTCAAGGAACTCAAACACATCGGCGTGCCACGGCTCCAGGTAAATG 35466
Query 66192 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 66251
|| | | | ||||| || ||||| || ||||| || | || | || ||||| || |
Sbjct 35465 GCAAAAGCACCAGGGCGCTTGTTGCCGCCCTGGTCGACATAGCGGGCAGTGTTGTTGAAC 35406
Query 66252 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCA 66311
|| | || ||| || ||||| || ||||| ||||| ||||| || | || || |||
Sbjct 35405 ACGCGCAGCATGGGGATAATGCCGTTGGAGGTACCGTTGGTACCAGCAATGTACGAGCCA 35346
Query 66312 CTTGCACGAATATTACTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 66369
| || || ||| || |||| | || || || || ||||| || || || | |
Sbjct 35345 GTGGCGCGGATACGGTGAACATTGA--GGCCGATACCACCAGCCATCTTGGAAATCATAG 35288
Query 66370 CGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAA 66429
| || || | ||||| || ||||| || || || ||| |||||| || ||||
Sbjct 35287 CACAAGTCTTGAGAGTATCGTAAATGCCTTCAATCGAGTCCTCCTTCATGTCAACCAGAA 35228
Query 66430 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 66489
| || |||| ||| || ||| || || || || | || || || ||||| |
Sbjct 35227 AGCAAGATGACAGCTGGGCCTGAGGAGTACCAGCGTTGAACAGAGTGGGCGAGGCGTGAG 35168
Query 66490 TAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAAT-----AGCTGAGTCTAT-ATCCC 66543
|||| | || || | || |||||||||||||| | || ||| | | |||
Sbjct 35167 TAAAGAACTTGCTCGACATGAGGTTGTACGTCTCAATGACGCGGTCGACTCTGTCACCCC 35108
Query 66544 ATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT 66603
| |||| || || || |||||||| | ||||||||| || | || || ||||||
Sbjct 35107 A--GATG----CCAACAGCCACACGCATAATCATGTGCTGGGGACGCTCGACAATCTTGC 35054
Query 66604 TGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAA 66663
|| | |||| || ||| || |||| || || || ||||| || | ||| ||
Sbjct 35053 CGTCCAACTTCAGCAGGTACGAACGCTCCAGGGTCTTGAAGCCAAAGTACTGGTAGTTAA 34994
Query 66664 AGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTT 66703
|||| || ||||| | ||| | |||| || | ||||||
Sbjct 34993 AGTCACGATCGTACACAATGGCAGAGTCCAGCTCATCCTT 34954
>seq1092
Length=189081
Score = 102 bits (112), Expect = 1e-16
Identities = 351/543 (65%), Gaps = 6/543 (1%)
Strand=Plus/Plus
Query 36172 GTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 36231
||| || |||||||| | ||| | ||||||||||| || || |||||||| || ||
Sbjct 137251 GTGCAGGCCCTCGTCGCGGGAAATCAGCTCGTTGGAAAAGGTCAGGCCGGGCATGAGACC 137310
Query 36232 ACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGC 36291
||||| |||||||| ||||| ||||| | || || ||||| || ||||| || ||
Sbjct 137311 GCGCTTGCGCAGCCAAAAGATGGAAGCAAAGGCGCCCGAGAAGAAGATGCCTTCGACGGC 137370
Query 36292 CGCAAAGGCAATAAGTCTCTCTCCATA-ACCGGCAC--TGTCATGTATCCACTTTTGAGC 36348
|||||||| | || | | || | || | | ||| |||||||| | ||
Sbjct 137371 GGCAAAGGCCACCAGACGTTGGGCAAAGGTCGACTCGTGGTCGGCAATCCACTTGAGGGC 137430
Query 36349 CCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGttttt 36408
||| |||||||| | || || || || || || || ||||| || ||| |
Sbjct 137431 CCAGTCGGCCTTGCGGCGGATGCAGGGAATAGTATCAATGGCGTTAAACAGGTAGCTGCG 137490
Query 36409 ttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTT 36468
| || || | || || ||||||| || || | || || || |||||
Sbjct 137491 CTGGGCGGGCTCCTTGATGTACGTGTCAATCAGCAGCGAGTATGTCTCGGAGTGGATGTT 137550
Query 36469 TTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACA 36528
|| || || ||||| |||||||| || | ||||||| ||||| || || |
Sbjct 137551 CTCCATCATGATCTGAAAGCCGTAGAAGCAGCGGGCCTCGGGGATCTGGACCTCGCCCGA 137610
Query 36529 AAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATAC 36588
|| || || | | || || || || || ||||| || ||||| || |||| ||
Sbjct 137611 GAAGCGCTCGACCAGGTTCTCGTTGACAATGCCGTCCGACGCGGCAAAGAAGGCCAGCAC 137670
Query 36589 ATGTTTTATAAAATATTTTTCGT--TTGGT-GTTAGTTTATTCCAATCATTGATATCTTT 36645
|| || || || ||||||| ||| | | | || ||||| || | | || ||
Sbjct 137671 GTGCGAGATGAAGTACTTTTCGTCCTTGTTCATGCGGTTGTTCCAGTCGTGCAGGTCCTT 137730
Query 36646 AGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCA 36705
|| | || | || || | ||||| || || ||||| |||||||| ||||| | |||
Sbjct 137731 GGACAGGTCAATCTCCTCGGCAGTCCAGAAGGACGCCTCGGCCTTTTTGTACATTTGCCA 137790
Query 36706 GAT 36708
|||
Sbjct 137791 GAT 137793
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658153754124600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |