Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04- 03] 2,315 sequences; 28,117,660 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq534 96.9 3e-15 >seq534 Length=62730 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 21110 CACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGG 21169 |||||| ||||| || | || || || || || |||||| |||||||||||| Sbjct 46360 CACGTAGAACTGGGCAAACATATGGCACGGCGGCAGGGCCATCTTTTTGAGGTCCGCGGG 46301 Query 21170 GTTCCACGCGCACATAACGATGCGCCGATCGT-GGGGCCGCCTGTTAATTAGATCCACCA 21228 ||||| || | ||||| ||| || ||||||| |||| | ||| || | | ||| | Sbjct 46300 ATTCCAGGCACTCATAATGATACGGCGATCGTACGGGCTGTGCTTTAGTTTG-TGCACTA 46242 Query 21229 CGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCG 21288 | | |||||| || || ||||| || ||||| || | || | ||| || | Sbjct 46241 CCTCGGCCAGCTGATCGACGCCCTGGCCGGTGTAGTCGGTCTGCGCATCGACGTATTCGG 46182 Query 21289 CCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCG 21338 | ||||| || | ||||||||| |||||||| || ||||| ||||||||| Sbjct 46181 CGCCAAAGTGGCGCCACTGGAAGCCGTACACGGGGCCCAGGTCGCCCTCG 46132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427763930701200