Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq534 96.9 3e-15
>seq534
Length=62730
Score = 96.9 bits (106), Expect = 3e-15
Identities = 161/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 21110 CACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGG 21169
|||||| ||||| || | || || || || || |||||| ||||||||||||
Sbjct 46360 CACGTAGAACTGGGCAAACATATGGCACGGCGGCAGGGCCATCTTTTTGAGGTCCGCGGG 46301
Query 21170 GTTCCACGCGCACATAACGATGCGCCGATCGT-GGGGCCGCCTGTTAATTAGATCCACCA 21228
||||| || | ||||| ||| || ||||||| |||| | ||| || | | ||| |
Sbjct 46300 ATTCCAGGCACTCATAATGATACGGCGATCGTACGGGCTGTGCTTTAGTTTG-TGCACTA 46242
Query 21229 CGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCG 21288
| | |||||| || || ||||| || ||||| || | || | ||| || |
Sbjct 46241 CCTCGGCCAGCTGATCGACGCCCTGGCCGGTGTAGTCGGTCTGCGCATCGACGTATTCGG 46182
Query 21289 CCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCG 21338
| ||||| || | ||||||||| |||||||| || ||||| |||||||||
Sbjct 46181 CGCCAAAGTGGCGCCACTGGAAGCCGTACACGGGGCCCAGGTCGCCCTCG 46132
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427763930701200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |