Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04- 03] 2,315 sequences; 28,117,660 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq1092 116 3e-21 >seq1092 Length=189081 Score = 116 bits (128), Expect = 3e-21 Identities = 286/427 (67%), Gaps = 14/427 (3%) Strand=Plus/Minus Query 22740 ACGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCAT 22799 |||||| |||||||||| || || |||||| || | || || || | ||||| |||| Sbjct 137389 ACGTCTGGTGGCCTTTGCCGCCGTCGAAGGCATCTTCTTCTCGGGCGCCTTTGCTTCCAT 137330 Query 22800 ATTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAG 22859 || |||||| || || |||||||| || || | |||||||||||| ||||| Sbjct 137329 CTTTTGGCTGCGCAAGCGCGGTCTCATGCCCGGCCTGACCTTTTCCAACGAGCTGATTTC 137270 Query 22860 CCGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAA 22919 ||| ||||| || || ||| |||||||| || |||| || ||| | ||| | Sbjct 137269 CCGCGACGAGGGCCTGCACACAGACTTTGCCTGCCTGCTCTTCTCGCACCT--CAA--CA 137214 Query 22920 ACCGTGTCAGGACGATGCACAT----CAAATCATATCTGATGCCGTTGACATTGAGACGG 22975 |||| ||| | || || || ||||||| | || || || | |||||| | || Sbjct 137213 ACCGCCCCAGCAAGAAGCTGATTGAGGAAATCATCACCGACGCTGTCGCCATTGAAAAGG 137154 Query 22976 CTTTCTTCCAAGAGGCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGTATGAGAC 23035 ||||| || || || | || || || ||||| ||| |||| | Sbjct 137153 AGTTCTTGACCGACGCCCTGCCCTGCGCTCTGCTCGGCATGAACGCCGACCTGATGAAGC 137094 Query 23036 TGTACATACAGTTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATA 23095 |||||| |||||||||| || || ||||| | ||||| || | | |||| || || Sbjct 137093 AGTACATTGAGTTTGTTGCCGACCGTCTGCTGGTCGCCCTCGGCAACGAAAAG--GTCTA 137036 Query 23096 ACGTT--GCCAATCCATTTGATTTCATGGATAACAT-TAGCATTGAAGGTAAAACAAACT 23152 || | |||| || ||||| |||||||| ||||| | || | | || || || |||| Sbjct 137035 CCGCTCCACCAACCCCTTTGACTTCATGGAGAACATCTCGC-TCGGCGGCAAGACCAACT 136977 Query 23153 TCTTTGA 23159 |||| || Sbjct 136976 TCTTCGA 136970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356223549202945