Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq1092 147 2e-30
seq2283 96.9 3e-15
>seq1092
Length=189081
Score = 147 bits (162), Expect = 2e-30
Identities = 364/541 (67%), Gaps = 21/541 (4%)
Strand=Plus/Minus
Query 52534 AACGCTTTTGACAATGTTCCGTGTGTGCGCAAAAAGGATGATTGGGCATTGAAATGGATC 52593
||||| |||| | | |||| || | ||| |||| || ||||| | || |||||
Sbjct 137475 AACGCCATTGATACTATTCCCTGCATCCGCCGCAAGGCCGACTGGGCCCTCAAGTGGATT 137416
Query 52594 GAAAACGACAAAGCCACTTTTGCCGAACGTCTGGTCGCGTTTGCTATAGTGGAAGGTGTG 52653
| || || | | || |||||| |||||||||| || ||||| || ||||| |
Sbjct 137415 GCCGACCACGAGTCGACCTTTGCCCAACGTCTGGTGGCCTTTGCCGCCGTCGAAGGCATC 137356
Query 52654 tttttttCGGGTAGTTTTGCGGCAATATTTTACAT-CAAAACCTTGGGCATAATGCCCGG 52712
|| || ||||| ||||| | || |||| | | || | || | | ||||||||
Sbjct 137355 TTCTTCTCGGGCGCCTTTGCTTCCATCTTTTGGCTGCGCAAGCGCGGTC-TCATGCCCGG 137297
Query 52713 CCTCACGTTTAGCAACGAGTTGATATCGCGCGACGAAGGAATGCACACAGATTTTGCGTG 52772
||| || ||| ||||||| |||| || |||||||| || |||||||||| ||||| ||
Sbjct 137296 CCTGACCTTTTCCAACGAGCTGATTTCCCGCGACGAGGGCCTGCACACAGACTTTGCCTG 137237
Query 52773 TTTG-TATTATAATACGCGCGTTAAAGAAAAATTGTCATATGAAAAA----ATTCTAGAC 52827
|| | || | ||| | | || || | | | || || ||| ||
Sbjct 137236 CCTGCTCTTCT----CGCACCTCAAC----AACCGCCCCAGCAAGAAGCTGATTGAGGAA 137185
Query 52828 ATGTTTAAAGAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCA 52887
|| | | || || |||| ||||||||| ||||| || || ||||| | ||| |
Sbjct 137184 ATCATCACCGACGCTGTCGCCATTGAAAAGGAGTTCTTGACCGACGCCCTGCCCTGCGCT 137125
Query 52888 TTGTTGGGCATGAACGC-GACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACT 52946
|| | ||||||||||| |||| ||||| ||||||| ||||||||||| ||| | ||
Sbjct 137124 CTGCTCGGCATGAACGCCGACC-TGATGAAGCAGTACATTGAGTTTGTTGCCGACCGTCT 137066
Query 52947 GTTGATGCAGCTCGGTCAGCCGAAATACTATAATGCGC--GTAACCCCTTTTCGTTTATG 53004
| || | ||||| || ||||| | || || | ||||||||| || |||
Sbjct 137065 GCTGGTCGCCCTCGG-CA-ACGAAAAGGTCTACCGCTCCACCAACCCCTTTGACTTCATG 137008
Query 53005 AACAACATATCGCTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTACAAA 53064
| ||||| ||||||| ||||| || ||||| ||||||| ||||| ||||| ||| ||
Sbjct 137007 GAGAACATCTCGCTCGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGCGACTACCAA 136948
Query 53065 A 53065
|
Sbjct 136947 A 136947
>seq2283
Length=86879
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594
|||||||| || | ||||| ||| | ||| | || ||||| || || ||||| || |||
Sbjct 41341 TGGCCGCCACGCAGACGCAGAACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCG 41282
Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654
|| || | || || ||||| ||||| || | ||||| || ||||| || |||
Sbjct 41281 GACAGGGTACGGCCATCCTCCAGCTGCTTACCCGCGAAAATCAGGCGCTGCTGGTCCGGA 41222
Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCC 139714
|| ||||| || || || ||| || || | | || | || |||| || |||
Sbjct 41221 GGAATGCCCTCCTTATCCTGGATCTTCGACTTCACATTGTCGATGGTATCGGAGGATTCC 41162
Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
||||||| || | ||||||||||| | || || ||||| |||||||||
Sbjct 41161 ACCTCAAGAGTGATTGTCTTGCCGGTAAGAGTCTTGACGAAGATTTGCATA 41111
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496049645148000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |