Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq1750 158 2e-33
seq1092 114 2e-20
>seq1750
Length=138661
Score = 158 bits (174), Expect = 2e-33
Identities = 460/701 (66%), Gaps = 18/701 (3%)
Strand=Plus/Minus
Query 71974 CCAGGACATTCATTCGGACACATCAATGACCACT-CTCCATCATCATTTACTCGTTTCAT 72032
||||| || || || |||||||||| | ||| | ||| || || | || || |||||
Sbjct 35645 CCAGGGCACTCGTTGGGACACATCAGGGTCCAGTTCTCGTTCTTC-TCGACACGCTTCAT 35587
Query 72033 AAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCC 72092
|| | || |||||||| ||||||| || || || | || | |||||| || ||
Sbjct 35586 GAACATGTCGGGAATCCACAGAGCTAGGAACAGGTCACGGGCGCGGACCTCCTCCTTACC 35527
Query 72093 TGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATAT 72152
|||||| || || |||||| | | | ||| | |||||||| |||| ||| ||
Sbjct 35526 ATGATTCTTGCGCAGGTCAAGGAACTCAAACACATCGGCGTGCCACGGCTCCAGGTAAAT 35467
Query 72153 GGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATA 72212
||| | | | || || || ||||| || ||||| || | || | || ||||| || |
Sbjct 35466 GGCAAAAGCACCAGGGCGCTTGTTGCCGCCCTGGTCGACATAGCGGGCAGTGTTGTTGAA 35407
Query 72213 AACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCC 72272
|| | || ||| || ||||| || ||||| | ||| ||||| || | || || ||
Sbjct 35406 CACGCGCAGCATGGGGATAATGCCGTTGGAGGTACCGTTGGTACCAGCAATGTACGAGCC 35347
Query 72273 ACTGGCACGAATATTGCTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 72330
| |||| || ||| | || |||| | || || || || ||||| || || || |
Sbjct 35346 AGTGGCGCGGATACGGTGAACATTGA--GGCCGATACCACCAGCCATCTTGGAAATCATA 35289
Query 72331 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGA 72390
|| || || | ||||| || ||||| || || || ||| |||||| || |||
Sbjct 35288 GCACAAGTCTTGAGAGTATCGTAAATGCCTTCAATCGAGTCCTCCTTCATGTCAACCAGA 35229
Query 72391 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGC 72450
|| || |||| ||| || ||| || || || || | || || || |||||
Sbjct 35228 AAGCAAGATGACAGCTGGGCCTGAGGAGTACCAGCGTTGAACAGAGTGGGCGAGGCGTGA 35169
Query 72451 GTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAAT-----AGCTGATTCTAT-ATCC 72504
||||| | || |||| || |||||||||||||| | || ||| | | ||
Sbjct 35168 GTAAAGAACTTGCTCGACATGAGGTTGTACGTCTCAATGACGCGGTCGACTCTGTCACCC 35109
Query 72505 CATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTG 72564
|| |||| || || || |||||||| | ||| ||||| || | || || ||||||
Sbjct 35108 CA--GATG----CCAACAGCCACACGCATAATCATGTGCTGGGGACGCTCGACAATCTTG 35055
Query 72565 TTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAA 72624
| | |||| || ||| || |||| || || || ||||| || | ||| |
Sbjct 35054 CCGTCCAACTTCAGCAGGTACGAACGCTCCAGGGTCTTGAAGCCAAAGTACTGGTAGTTA 34995
Query 72625 AAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTT 72665
||||| || ||||| | ||| | || | || | ||||||
Sbjct 34994 AAGTCACGATCGTACACAATGGCAGAGTCCAGCTCATCCTT 34954
Score = 86.0 bits (94), Expect = 8e-12
Identities = 186/278 (67%), Gaps = 3/278 (1%)
Strand=Plus/Minus
Query 70801 GTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGA 70860
||||||||||| || | | || || | ||||| || ||||||||||| || || |||
Sbjct 36827 GTAAACTGAATAGGCGCCGCAGCAGCCTGAGTACGCAGGTAGTACATGCCCGTCTTGAGA 36768
Query 70861 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATG 70920
|| || |||| ||| ||| ||||| || || | ||| | |||| || |||
Sbjct 36767 CCCAGCTTCCAGCCGGCAAAGTGCATGCTGGTAATCTTGCCCATGGTAGGGTCCTTCATG 36708
Query 70921 TGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 70980
||||| || | |||||| || ||||| ||||| || | ||| |||||||| | |
Sbjct 36707 TGAATGTTGAGCGACTGCGACTGGTCGATAAAGGCACCACGGTCGGCAGCCATCTGCACC 36648
Query 70981 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 71040
| ||| || | ||| ||||| | || || || | ||| || || || |||| |
Sbjct 36647 ACCGTGCGCTGCGAAATCTCCCACACTGTCTTGTACAGAGCCTTGATGTCGTCGGGAATG 36588
Query 71041 TTTG---TATTCTGAATGGATCCACCATCTGCAATAAT 71075
| | | |||||||| || || || ||||||||
Sbjct 36587 CTGGGAATGTTCTGAATAGAACCGTTCTCGGCAATAAT 36550
>seq1092
Length=189081
Score = 114 bits (126), Expect = 2e-20
Identities = 354/544 (65%), Gaps = 8/544 (1%)
Strand=Plus/Plus
Query 42079 GTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 42138
|||||| ||||| || | ||| | ||||||||||| || || |||||||| || ||
Sbjct 137251 GTGCAGGCCCTCGTCGCGGGAAATCAGCTCGTTGGAAAAGGTCAGGCCGGGCATGAGACC 137310
Query 42139 ACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGC 42198
||||| |||||||| || || ||||| | || || |||||||| ||||| || ||
Sbjct 137311 GCGCTTGCGCAGCCAAAAGATGGAAGCAAAGGCGCCCGAGAAGAAGATGCCTTCGACGGC 137370
Query 42199 CGCAAAGGCAATAAGTCTCTCTCCATA-ACCGGCAC--TGTCATGTATCCACTTTTGAGC 42255
|||||||| | || | | || | || | | ||| |||||||| | ||
Sbjct 137371 GGCAAAGGCCACCAGACGTTGGGCAAAGGTCGACTCGTGGTCGGCAATCCACTTGAGGGC 137430
Query 42256 CCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGttttt 42315
||| |||||||| | || || || || || ||||| ||||| || ||| |
Sbjct 137431 CCAGTCGGCCTTGCGGCGGATGCAGGGAATAGTATCAATGGCGTTAAACAGGTAGCTGCG 137490
Query 42316 ttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAATGTT 42375
| || || | || || || |||| || || | || || || |||||
Sbjct 137491 CTGGGCGGGCTCCTTGATGTACGTGTCAATCAGCAGCGAGTATGTCTCGGAGTGGATGTT 137550
Query 42376 TTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTACA 42435
|| || |||||||| |||||||| || | |||||||| | ||| || || |
Sbjct 137551 CTCCATCATGATCTGAAAGCCGTAGAAGCAGCGGGCCTCGGGGATCTGGACCTCGCCCGA 137610
Query 42436 AAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATAC 42495
|| || || | | || ||||| || || ||||| || ||||| || |||| ||
Sbjct 137611 GAAGCGCTCGACCAGGTTCTCGTTGACAATGCCGTCCGACGCGGCAAAGAAGGCCAGCAC 137670
Query 42496 ATGTTTTATAAAATATTTTTCGTCCGGTGTTAAT----TTATTCCAATCATTGATATCTT 42551
|| || || || ||||||||| |||| || || ||||| || | | || |
Sbjct 137671 GTGCGAGATGAAGTACTTTTCGTCC-TTGTTCATGCGGTTGTTCCAGTCGTGCAGGTCCT 137729
Query 42552 TAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACATATTCC 42611
| || | || | || || | ||||| || || || || |||||||| ||||| | ||
Sbjct 137730 TGGACAGGTCAATCTCCTCGGCAGTCCAGAAGGACGCCTCGGCCTTTTTGTACATTTGCC 137789
Query 42612 AGAT 42615
||||
Sbjct 137790 AGAT 137793
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671119778909400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |