Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq1092 255 9e-63
seq1750 154 2e-32
>seq1092
Length=189081
Score = 255 bits (282), Expect = 9e-63
Identities = 584/867 (67%), Gaps = 33/867 (4%)
Strand=Plus/Minus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| |||||||||||||||| |||| ||||| ||||| | ||| ||| | || |||
Sbjct 137793 ATCTGGCAAATGTACAAAAAGGCCGAGGCGTCCTTCTGGACTGCCGAGGAGATTGACCTG 137734
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAG---TTTATA 125135
|||||||||||| |||| ||| | | || ||| | | || | || || ||
Sbjct 137733 TCCAAGGACCTGCACGACTGGAACAACCGCATGA---ACAAGGACGAAAAGTACTTCATC 137677
Query 125136 TCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACA 125195
|||||| | ||||||||||||||| || || || || |||||||| || ||| |
Sbjct 137676 TCGCACGTGCTGGCCTTCTTTGCCGCGTCGGACGGCATTGTCAACGAGAACCTGGTCGAG 137617
Query 125196 CGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATG 125255
|| ||||| ||| | || || |||| ||||| ||||| || || ||||||
Sbjct 137616 CGCTTCTCGGGCGAGGTCCAGATCCCCGAGGCCCGCTGCTTCTACGGCTTTCAGATCATG 137557
Query 125256 ATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATC-- 125313
|| |||||| | ||||| || | ||||| |||||||||| |||||| || |
Sbjct 137556 ATGGAGAACATCCACTCCGAGACATACTCGCTGCTGATTGACACGTACATCAAGGAGCCC 137497
Query 125314 -CGCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAG 125372
| || || | || || |||||||| || || || | || | || || |||
Sbjct 137496 GCCCAGCGCAGCTAC---CTGTTTAACGCCATTGATACTATTCCCTGCATCCGCCGCAAG 137440
Query 125373 GCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTG 125432
|| | |||| | |||||| | ||| || |||| | | ||| | | ||||||
Sbjct 137439 GCCGACTGGGCCCTCAAGTGGATTGCCGACCACGAGTCGACCTTTGCCCAACGTCTGGTG 137380
Query 125433 GCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTC 125492
|| || |||||||| || ||||||||||| ||||| ||||| |||||||||||||
Sbjct 137379 GCCTTTGCCGCCGTCGAAGGCATCTTCTTCTCGGGCGCCTTTGCTTCCATCTTTTGGCTG 137320
Query 125493 AAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAG 125552
|||||||| ||||||||||| ||||| |||||| | || || || ||||||
Sbjct 137319 CGCAAGCGCGGTCTCATGCCCGGCCTGACCTTTTCCAACGAGCTGATTTCCCGCGACGAG 137260
Query 125553 GGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT-ATCTGCGTCCCGAGTGCA 125610
||||| ||| ||||||||| || || || ||||| || | | | ||| || |
Sbjct 137259 GGCCTGCACACAGACTTTGCCTGCCTGCTCTTCTCGCACCTCAACAACCGCCCCAG-CAA 137201
Query 125611 GATCCAGC-GATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAG 125669
|| ||| ||| ||| |||| | ||||| || || || ||| | |||
Sbjct 137200 GA---AGCTGAT--TGAGGAAATCA------TCACCGACGCTGTCGCCATTGAAAAGGAG 137152
Query 125670 TTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAG 125729
|| | ||||| |||| || | || | ||||||||| | | || ||| ||
Sbjct 137151 TTCTTGACCGACGCCCTGCCCTGCGCTCTGCTCGGCATGAACGCCGACCTGATGAAGCAG 137092
Query 125730 TACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC--CG-CAAGATTTAC 125786
||||| |||||||| || || ||||| ||| || | ||| || ||| | |||
Sbjct 137091 TACATTGAGTTTGTTGCCGACCGTCTGCTGGTCG---CCCTCGGCAACGAAAAGGTCTAC 137035
Query 125787 AACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTT 125846
| ||| || |||||||| |||||| | ||| || || | || |||||||||||
Sbjct 137034 CGCTCCACCAACCCCTTTGACTTCATGGAGAACATCTCGCTCGGCGGCAAGACCAACTTC 136975
Query 125847 TTCGAGAAGAAGGTCAGCGAGTACAAA 125873
||||||||| ||| |||| ||| ||
Sbjct 136974 TTCGAGAAGCGTGTCGGCGACTACCAA 136948
>seq1750
Length=138661
Score = 154 bits (170), Expect = 2e-32
Identities = 305/446 (68%), Gaps = 4/446 (1%)
Strand=Plus/Plus
Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935
||||||||||| || || || || ||| | ||| | ||| |||| || |||||||| ||
Sbjct 35434 CAGGGCGGCAACAAGCGCCCTGGTGCTTTTGCCATTTACCTGGAGCCGTGGCACGCCGAT 35493
Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995
|| ||||| || | || ||||||| || ||| || |||| || ||| | |||
Sbjct 35494 GTGTTTGAGTTCCTTGACCTGCGCAAGAATCATGGTAAGGAGGAGGTCCGCGCCCGTGAC 35553
Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055
|||| || || ||| | || || ||||||||||||| ||| | | | ||
Sbjct 35554 CTGTTCCTAGCTCTGTGGATTCCCGACATGTTCATGAAGCGTGTCGAGAAGAACGAGAAC 35613
Query 97056 TGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTT 97115
|||| ||| ||||| ||| || || || || ||| | || |||| ||||| || |||
Sbjct 35614 TGGACCCTGATGTGTCCCAACGAGTGCCCTGGCCTGGCTGACTGCTACGGCGAGGAATTT 35673
Query 97116 GAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGAGTCGATGCACG 97174
||||| |||| |||||| | |||||||| || || || ||| | || |
Sbjct 35674 GAGGCTCTGTACGAAAAGTACGAGAAGGAGGGCCGTGGTCGGCAGTCG-GTCAAGGC-CC 35731
Query 97175 AGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCT 97233
|||| |||||| | ||||| || ||| ||| |||||||| | |||| || || |
Sbjct 35732 AGAAGCTGTGGTATGCCATTTTGGAGGCCCAGACCGAGACTGGCAACCCGTTTATGCTGT 35791
Query 97234 ACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCA 97293
||||||| | || ||||| ||||||||| | |||| ||||| ||||||
Sbjct 35792 ACAAGGACCACTGCAACCGCAAGAGCAACCAAAAGAATCTGGGTACCATTCGCAGCTCCA 35851
Query 97294 ATCTGTGCACGGAAATTGTAGAGTAC 97319
| |||||||| || ||| | ||||||
Sbjct 35852 ACCTGTGCACTGAGATTATCGAGTAC 35877
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741037755599400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |