Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04- 03] 2,315 sequences; 28,117,660 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq2172 82.4 7e-11 >seq2172 Length=92723 Score = 82.4 bits (90), Expect = 7e-11 Identities = 114/160 (71%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 5330 AGCTGAGCTATCCTGTCTCCCTTCTTAACCTCAAAGTCGCTGTTTCCGAAGTTAAACAGC 5389 ||||| || | | ||| || ||| ||||||||||| ||| | ||| ||||| Sbjct 40150 AGCTGCGCCACACGGTCGCCAGCCTTGACCTCAAAGTCCGTGTCGTTGTGGTTGAACAGT 40091 Query 5390 ACCACCCCGACATTGCCTCGGTAGTCTTCGTCGATAACGCCAGCGCCCACGTCGATAAAG 5449 | ||| ||| | || |||||||| |||| || || || |||||| ||| |||||| Sbjct 40090 AGAACCTTGACTTCACCACGGTAGTCAGCGTCAATGACACCGGCGCCCGTGTCAATAAAG 40031 Query 5450 TGTTTGACCGCAAGGCCGGAACGTGGTGCTATGCGTCCGT 5489 || ||| ||||||| || ||||| || || || || |||| Sbjct 40030 TGCTTGGCCGCAAGACCAGAACGGGGAGCAATACGGCCGT 39991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447737443222800