Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04- 03] 2,315 sequences; 28,117,660 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq2283 91.5 1e-13 seq335 84.2 2e-11 >seq2283 Length=86879 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583 ||||| || |||||| || |||||||| |||| || || | |||||||||||| Sbjct 41086 TGAAGAGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTGC 41027 Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643 ||||| || |||| | ||||||||| ||| || | || ||||||||| || || Sbjct 41026 TTACCCGCGAAAATCAGACGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTG 40967 Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703 ||||| | |||||||| | ||||| |||| || ||||| || ||||| Sbjct 40966 GACTTGACGTTGTCAATGGTATCCGACGACTCGACTTCGAGAGTGATGGTCTTGCCGGTA 40907 Query 48704 AGAGTTTTCACAAAAATCTGCAT 48726 ||||| || || || || ||||| Sbjct 40906 AGAGTCTTGACGAAGATTTGCAT 40884 >seq335 Length=221524 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/195 (70%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 48537 CCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595 |||| || |||||||| |||| || | || || | |||||||||||||| || || | Sbjct 117049 CCTTCTGGATGTTGTAGTCAGACAGAGTGCGGC-CATCCTCCAGCTGCTTGCCAGCGAAG 117107 Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655 || | ||||||||| ||| || | | ||||||||| ||| || ||||| | Sbjct 117108 ATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTG 117167 Query 48656 GCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACA 48715 | || || || | ||||| ||||| || || || ||||| || || || || || Sbjct 117168 TCGATAGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTCAGGGTCTTGACG 117227 Query 48716 AAAATCTGCATCGTG 48730 |||||||||||| || Sbjct 117228 AAAATCTGCATCTTG 117242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421239314792315