Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq2283 91.5 1e-13
seq335 84.2 2e-11
>seq2283
Length=86879
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583
||||| || |||||| || |||||||| |||| || || | ||||||||||||
Sbjct 41086 TGAAGAGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTGC 41027
Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643
||||| || |||| | ||||||||| ||| || | || ||||||||| || ||
Sbjct 41026 TTACCCGCGAAAATCAGACGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTG 40967
Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703
||||| | |||||||| | ||||| |||| || ||||| || |||||
Sbjct 40966 GACTTGACGTTGTCAATGGTATCCGACGACTCGACTTCGAGAGTGATGGTCTTGCCGGTA 40907
Query 48704 AGAGTTTTCACAAAAATCTGCAT 48726
||||| || || || || |||||
Sbjct 40906 AGAGTCTTGACGAAGATTTGCAT 40884
>seq335
Length=221524
Score = 84.2 bits (92), Expect = 2e-11
Identities = 137/195 (70%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 48537 CCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595
|||| || |||||||| |||| || | || || | |||||||||||||| || || |
Sbjct 117049 CCTTCTGGATGTTGTAGTCAGACAGAGTGCGGC-CATCCTCCAGCTGCTTGCCAGCGAAG 117107
Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655
|| | ||||||||| ||| || | | ||||||||| ||| || ||||| |
Sbjct 117108 ATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTG 117167
Query 48656 GCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACA 48715
| || || || | ||||| ||||| || || || ||||| || || || || ||
Sbjct 117168 TCGATAGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTCAGGGTCTTGACG 117227
Query 48716 AAAATCTGCATCGTG 48730
|||||||||||| ||
Sbjct 117228 AAAATCTGCATCTTG 117242
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421239314792315
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |