Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04- 03] 2,315 sequences; 28,117,660 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq225 181 2e-41 seq1706 96.9 5e-16 >seq225 Length=75282 Score = 181 bits (200), Expect = 2e-41 Identities = 203/269 (75%), Gaps = 2/269 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| ||| |||||| || |||||||| || ||||||||||| |||| Sbjct 20469 CGCCAAGCGTCACCGCAAGAT-TCTTCGCGACAACATCCAGGGTATCACCAAGCCCGCTA 20411 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||| ||||| |||||||||||||| ||||||||| |||||| || |||| || |||| Sbjct 20410 TCCGCCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTGCCATGATCTACGAGGAGA 20351 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 || ||| | ||| |||||| || || |||| ||| || || ||| |||| Sbjct 20350 CCCGCACTGTCCTCAAGTCGTTCCTCGAGGGTGTCATCCGTGACGCCGTCACCTACACCG 20291 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || || |||||||||||||| |||| | ||||| || | || | |||| Sbjct 20290 AGCACGCCAAGCGCAAGACTGTCACCTCGCTGGACGTTGTCTACGCCCTCAAGAGACAAG 20231 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||| | | || ||||| || ||||| Sbjct 20230 GCCGCACCCTGTACGGTTTCGGTGGTTAA 20202 >seq1706 Length=149376 Score = 96.9 bits (106), Expect = 5e-16 Identities = 80/95 (84%), Gaps = 2/95 (2%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 |||||||||||| |||| ||| ||| || || ||||| || || || |||||||| || | Sbjct 21533 CGCTAAGCGTCACCGCAAGAT-TCTCCGTGACAACATTCAGGGTATTACCAAGCCCGCCA 21475 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGT 16525 | || |||||||||||||||||||| ||||||||| Sbjct 21474 TTCGCCGTCTGGCTCGTCGTGGTGGTGTCAAGCGT 21440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79073083379295