Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq1750 150 2e-31
seq1092 123 3e-23
>seq1750
Length=138661
Score = 150 bits (166), Expect = 2e-31
Identities = 456/700 (65%), Gaps = 16/700 (2%)
Strand=Plus/Minus
Query 63168 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 63227
||||| || || | |||||||||| | ||| | ||| | || || || |||||
Sbjct 35645 CCAGGGCACTCGTTGGGACACATCAGGGTCCAGTTCTCGTTCTTCTCGACACGCTTCATG 35586
Query 63228 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCT 63287
|| | || |||||||| ||||||| || || || | || | ||||| || ||
Sbjct 35585 AACATGTCGGGAATCCACAGAGCTAGGAACAGGTCACGGGCGCGGACCTCCTCCTTACCA 35526
Query 63288 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 63347
|||||| || || |||||| | | | ||| | |||||||| |||| ||| |||
Sbjct 35525 TGATTCTTGCGCAGGTCAAGGAACTCAAACACATCGGCGTGCCACGGCTCCAGGTAAATG 35466
Query 63348 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 63407
|| | | | ||||| || ||||| || ||||| || | || | || ||||| || |
Sbjct 35465 GCAAAAGCACCAGGGCGCTTGTTGCCGCCCTGGTCGACATAGCGGGCAGTGTTGTTGAAC 35406
Query 63408 ACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCA 63467
|| | || ||| || ||||| ||||| || |||| |||||||| | || || |||
Sbjct 35405 ACGCGCAGCATGGGGATAATGCCGTTGGAGGTACCGTTGGTACCAGCAATGTACGAGCCA 35346
Query 63468 CTGGCACGAATATTACTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 63525
|||| || ||| || |||| | || || || || ||||| || || || | |
Sbjct 35345 GTGGCGCGGATACGGTGAACATTGA--GGCCGATACCACCAGCCATCTTGGAAATCATAG 35288
Query 63526 CGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAA 63585
| || || | || || || || || || || || || |||||| || ||||
Sbjct 35287 CACAAGTCTTGAGAGTATCGTAAATGCCTTCAATCGAGTCCTCCTTCATGTCAACCAGAA 35228
Query 63586 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 63645
| || |||| ||| || ||| || || || || | || || || ||||| |
Sbjct 35227 AGCAAGATGACAGCTGGGCCTGAGGAGTACCAGCGTTGAACAGAGTGGGCGAGGCGTGAG 35168
Query 63646 TAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAAT-----AGCTGAGTCTAT-ATCCC 63699
|||| | || || | || |||||||||||||| | || ||| | | |||
Sbjct 35167 TAAAGAACTTGCTCGACATGAGGTTGTACGTCTCAATGACGCGGTCGACTCTGTCACCCC 35108
Query 63700 ATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT 63759
| |||| || || || |||||||| | ||||||||| || | || || ||||||
Sbjct 35107 A--GATG----CCAACAGCCACACGCATAATCATGTGCTGGGGACGCTCGACAATCTTGC 35054
Query 63760 TGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAA 63819
|| | |||| || ||| || |||| || || || ||||| || | ||| ||
Sbjct 35053 CGTCCAACTTCAGCAGGTACGAACGCTCCAGGGTCTTGAAGCCAAAGTACTGGTAGTTAA 34994
Query 63820 AGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTT 63859
|||| || ||||| | ||| | |||| || | ||||||
Sbjct 34993 AGTCACGATCGTACACAATGGCAGAGTCCAGCTCATCCTT 34954
>seq1092
Length=189081
Score = 123 bits (136), Expect = 3e-23
Identities = 356/543 (66%), Gaps = 6/543 (1%)
Strand=Plus/Plus
Query 33318 GTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 33377
|||||| |||||||| | ||| || ||||||||||| || || |||||||| || ||
Sbjct 137251 GTGCAGGCCCTCGTCGCGGGAAATCAGCTCGTTGGAAAAGGTCAGGCCGGGCATGAGACC 137310
Query 33378 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGC 33437
||||| |||||||| |||||||| || | || || |||||||| ||||| || ||
Sbjct 137311 GCGCTTGCGCAGCCAAAAGATGGAAGCAAAGGCGCCCGAGAAGAAGATGCCTTCGACGGC 137370
Query 33438 AGCAAAGGCAATAAGTCTCTCTCCATA-ACCG--GCGCTGTCATGTATCCACTTTTGAGC 33494
|||||||| | || | | || | || || ||| |||||||| | ||
Sbjct 137371 GGCAAAGGCCACCAGACGTTGGGCAAAGGTCGACTCGTGGTCGGCAATCCACTTGAGGGC 137430
Query 33495 CCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGttttt 33554
||| |||||||| | || || || || || ||||| ||||| || ||| |
Sbjct 137431 CCAGTCGGCCTTGCGGCGGATGCAGGGAATAGTATCAATGGCGTTAAACAGGTAGCTGCG 137490
Query 33555 ttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTT 33614
| || || | || || || |||| || || | || || || |||||
Sbjct 137491 CTGGGCGGGCTCCTTGATGTACGTGTCAATCAGCAGCGAGTATGTCTCGGAGTGGATGTT 137550
Query 33615 TTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACA 33674
|| || |||||||| |||||||| || | ||||||| ||||| || || |
Sbjct 137551 CTCCATCATGATCTGAAAGCCGTAGAAGCAGCGGGCCTCGGGGATCTGGACCTCGCCCGA 137610
Query 33675 AAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATAC 33734
|| || || ||| || || || || || ||||| || ||||| || |||| ||
Sbjct 137611 GAAGCGCTCGACCAGGTTCTCGTTGACAATGCCGTCCGACGCGGCAAAGAAGGCCAGCAC 137670
Query 33735 ATGTTTTATAAAATATTTTTCGT-CTGGT--GTTAGTTTATTCCAATCATTGATATCTTT 33791
|| || || || ||||||| || || | | || ||||| || | | || ||
Sbjct 137671 GTGCGAGATGAAGTACTTTTCGTCCTTGTTCATGCGGTTGTTCCAGTCGTGCAGGTCCTT 137730
Query 33792 AGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCCA 33851
|| | || | || || | ||||| || || ||||| |||||||| ||||| | |||
Sbjct 137731 GGACAGGTCAATCTCCTCGGCAGTCCAGAAGGACGCCTCGGCCTTTTTGTACATTTGCCA 137790
Query 33852 GAT 33854
|||
Sbjct 137791 GAT 137793
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622929173465400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |