Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04- 03] 2,315 sequences; 28,117,660 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq1750 150 2e-31 seq1092 123 3e-23 >seq1750 Length=138661 Score = 150 bits (166), Expect = 2e-31 Identities = 456/700 (65%), Gaps = 16/700 (2%) Strand=Plus/Minus Query 63168 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 63227 ||||| || || | |||||||||| | ||| | ||| | || || || ||||| Sbjct 35645 CCAGGGCACTCGTTGGGACACATCAGGGTCCAGTTCTCGTTCTTCTCGACACGCTTCATG 35586 Query 63228 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCT 63287 || | || |||||||| ||||||| || || || | || | ||||| || || Sbjct 35585 AACATGTCGGGAATCCACAGAGCTAGGAACAGGTCACGGGCGCGGACCTCCTCCTTACCA 35526 Query 63288 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 63347 |||||| || || |||||| | | | ||| | |||||||| |||| ||| ||| Sbjct 35525 TGATTCTTGCGCAGGTCAAGGAACTCAAACACATCGGCGTGCCACGGCTCCAGGTAAATG 35466 Query 63348 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 63407 || | | | ||||| || ||||| || ||||| || | || | || ||||| || | Sbjct 35465 GCAAAAGCACCAGGGCGCTTGTTGCCGCCCTGGTCGACATAGCGGGCAGTGTTGTTGAAC 35406 Query 63408 ACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCA 63467 || | || ||| || ||||| ||||| || |||| |||||||| | || || ||| Sbjct 35405 ACGCGCAGCATGGGGATAATGCCGTTGGAGGTACCGTTGGTACCAGCAATGTACGAGCCA 35346 Query 63468 CTGGCACGAATATTACTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 63525 |||| || ||| || |||| | || || || || ||||| || || || | | Sbjct 35345 GTGGCGCGGATACGGTGAACATTGA--GGCCGATACCACCAGCCATCTTGGAAATCATAG 35288 Query 63526 CGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAA 63585 | || || | || || || || || || || || || |||||| || |||| Sbjct 35287 CACAAGTCTTGAGAGTATCGTAAATGCCTTCAATCGAGTCCTCCTTCATGTCAACCAGAA 35228 Query 63586 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 63645 | || |||| ||| || ||| || || || || | || || || ||||| | Sbjct 35227 AGCAAGATGACAGCTGGGCCTGAGGAGTACCAGCGTTGAACAGAGTGGGCGAGGCGTGAG 35168 Query 63646 TAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAAT-----AGCTGAGTCTAT-ATCCC 63699 |||| | || || | || |||||||||||||| | || ||| | | ||| Sbjct 35167 TAAAGAACTTGCTCGACATGAGGTTGTACGTCTCAATGACGCGGTCGACTCTGTCACCCC 35108 Query 63700 ATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT 63759 | |||| || || || |||||||| | ||||||||| || | || || |||||| Sbjct 35107 A--GATG----CCAACAGCCACACGCATAATCATGTGCTGGGGACGCTCGACAATCTTGC 35054 Query 63760 TGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAA 63819 || | |||| || ||| || |||| || || || ||||| || | ||| || Sbjct 35053 CGTCCAACTTCAGCAGGTACGAACGCTCCAGGGTCTTGAAGCCAAAGTACTGGTAGTTAA 34994 Query 63820 AGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTT 63859 |||| || ||||| | ||| | |||| || | |||||| Sbjct 34993 AGTCACGATCGTACACAATGGCAGAGTCCAGCTCATCCTT 34954 >seq1092 Length=189081 Score = 123 bits (136), Expect = 3e-23 Identities = 356/543 (66%), Gaps = 6/543 (1%) Strand=Plus/Plus Query 33318 GTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 33377 |||||| |||||||| | ||| || ||||||||||| || || |||||||| || || Sbjct 137251 GTGCAGGCCCTCGTCGCGGGAAATCAGCTCGTTGGAAAAGGTCAGGCCGGGCATGAGACC 137310 Query 33378 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGC 33437 ||||| |||||||| |||||||| || | || || |||||||| ||||| || || Sbjct 137311 GCGCTTGCGCAGCCAAAAGATGGAAGCAAAGGCGCCCGAGAAGAAGATGCCTTCGACGGC 137370 Query 33438 AGCAAAGGCAATAAGTCTCTCTCCATA-ACCG--GCGCTGTCATGTATCCACTTTTGAGC 33494 |||||||| | || | | || | || || ||| |||||||| | || Sbjct 137371 GGCAAAGGCCACCAGACGTTGGGCAAAGGTCGACTCGTGGTCGGCAATCCACTTGAGGGC 137430 Query 33495 CCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGttttt 33554 ||| |||||||| | || || || || || ||||| ||||| || ||| | Sbjct 137431 CCAGTCGGCCTTGCGGCGGATGCAGGGAATAGTATCAATGGCGTTAAACAGGTAGCTGCG 137490 Query 33555 ttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTT 33614 | || || | || || || |||| || || | || || || ||||| Sbjct 137491 CTGGGCGGGCTCCTTGATGTACGTGTCAATCAGCAGCGAGTATGTCTCGGAGTGGATGTT 137550 Query 33615 TTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACA 33674 || || |||||||| |||||||| || | ||||||| ||||| || || | Sbjct 137551 CTCCATCATGATCTGAAAGCCGTAGAAGCAGCGGGCCTCGGGGATCTGGACCTCGCCCGA 137610 Query 33675 AAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATAC 33734 || || || ||| || || || || || ||||| || ||||| || |||| || Sbjct 137611 GAAGCGCTCGACCAGGTTCTCGTTGACAATGCCGTCCGACGCGGCAAAGAAGGCCAGCAC 137670 Query 33735 ATGTTTTATAAAATATTTTTCGT-CTGGT--GTTAGTTTATTCCAATCATTGATATCTTT 33791 || || || || ||||||| || || | | || ||||| || | | || || Sbjct 137671 GTGCGAGATGAAGTACTTTTCGTCCTTGTTCATGCGGTTGTTCCAGTCGTGCAGGTCCTT 137730 Query 33792 AGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCCA 33851 || | || | || || | ||||| || || ||||| |||||||| ||||| | ||| Sbjct 137731 GGACAGGTCAATCTCCTCGGCAGTCCAGAAGGACGCCTCGGCCTTTTTGTACATTTGCCA 137790 Query 33852 GAT 33854 ||| Sbjct 137791 GAT 137793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622929173465400