Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04- 03] 2,315 sequences; 28,117,660 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq1092 84.2 2e-11 >seq1092 Length=189081 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/227 (69%), Gaps = 4/227 (2%) Strand=Plus/Plus Query 119645 GTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATTCAT 119704 ||| ||||| ||||| || || || || || |||||||| | || || ||||| | ||| Sbjct 136951 GTAGTCGCCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCGAGCGAGATGTTCTCCAT 137010 Query 119705 AAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAGTCG 119764 || || || || || | | | | | ||| |||| ||| | ||| || ||| || Sbjct 137011 GAAGTCAAAGGGGTTGGTGGAGCGGTAGACCTTTTCGTTGCCGAGGGCGACCAGCAGACG 137070 Query 119765 ATCTGCCACAAACTCGATGTATTCGCACAT--GGATTGCGAATTCATGCCCAACATAGCG 119822 || || |||||||| ||||| | ||| || ||| |||||||| | || |||| Sbjct 137071 GTCGGCAACAAACTCAATGTACTGCTTCATCAGGTCGGCG--TTCATGCCGAGCAGAGCG 137128 Query 119823 ACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTC 119869 || | || | ||| ||||| |||||||||||| |||| || || Sbjct 137129 CAGGGCAGGGCGTCGGTCAAGAACTCCTTTTCAATGGCGACAGCGTC 137175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478648548706800