Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04- 03] 2,315 sequences; 28,117,660 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1750 389 1e-102 >seq1750 Length=138661 Score = 389 bits (430), Expect = 1e-102 Identities = 1140/1734 (66%), Gaps = 32/1734 (2%) Strand=Plus/Plus Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCC-CGGA 363500 ||||| || || || ||||| ||| | |||||||| ||| |||| ||| | | || Sbjct 35059 ATTGTCGAGCGTCCCCAGCACATGATTATGCGTGTGGCTGTTGGCATCTGGGGTGACAGA 35118 Query 363501 TGTTGATGCCGCG--ATTGAAACATATAAGCTTCTAA-GTGCTCGTGTATTCACGCACGC 363557 || || ||||| ||||| || || || || | | || || | || || ||||| Sbjct 35119 -GTCGA--CCGCGTCATTGAGACGTACAACCTCATGTCGAGCAAGT-TCTTTACTCACGC 35174 Query 363558 CACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCT 363617 | |||| || ||| ||| ||||| |||| | | | ||| |||| ||||||||||| | Sbjct 35175 CTCGCCCACTCTGTTCAACGCTGGTACTCCTCAGGCCCAGCTGTCATCTTGCTTTCTGGT 35234 Query 363618 AAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTAT 363677 | |||||||| || || || || || || | || || || |||| ||||||| | || Sbjct 35235 TGACATGAAGGAGGACTCGATTGAAGGCATTTACGATACTCTCAAGACTTGTGCTATGAT 35294 Query 363678 TTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTT 363736 |||||||| || || || || || | | ||| | | || || || | || Sbjct 35295 TTCCAAGATGGCTGGTGGTATCGGCCTCAATGTTCACCGTATCCGCGCCACTGGCTCGT- 35353 Query 363737 ACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACA 363796 ||||| || || || ||| || || | | |||||||| || ||||| ||| Sbjct 35354 ACATTGCTGGTACCAACGGTACCTCCAACGGCATTATCCCCATGCTGCGCGTGTTCAACA 35413 Query 363797 ATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATC 363856 | ||||| | || ||||||||||| || |||||| || || ||||| || || | Sbjct 35414 ACACTGCCCGCTATGTCGACCAGGGCGGCAACAAGCGCCCTGGTGCTTTTGCCATTTACC 35473 Query 363857 TCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAG 363916 | ||||| || |||||| | |||||||| ||||| || || || || || || | Sbjct 35474 TGGAGCCGTGGCACGCCGATGTGTTTGAGTTCCTTGACCTGCGCAAGAATCATGGTAAGG 35533 Query 363917 AGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGC 363976 |||| | || || ||||| |||||| || || ||| || | ||| || ||||||| Sbjct 35534 AGGAGGTCCGCGCCCGTGACCTGTTCCTAGCTCTGTGGATTCCCGACATGTTCATGAAGC 35593 Query 363977 GCGTGGAGGCAGGTA--AGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTC 364034 | || ||| | | | |||| ||| | || | || || |||| || || || || | Sbjct 35594 GTGTCGAG--AAGAACGAGAACTGGACCCTGATGTGTCCCAACGAGTGCCCTGGCCTGGC 35651 Query 364035 CGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGC 364094 || | || || || | || ||||| ||||||||||| || |||||| | Sbjct 35652 TGACTGCTACGGCGAGGAATTTGAGGCTCTGTACGAAAAGTACGAGAAGGAGGGCCGTGG 35711 Query 364095 TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGAC 364154 ||| || | | || |||||||| |||| |||||| |||| | |||| ||||| Sbjct 35712 TCGGCAGTCGGTCAAGGCCCAGAAGCTGTGGTATGCCATTTTGGAGGCCCAGACCGAGAC 35771 Query 364155 AGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCT 364214 || | || | |||| ||||||| || |||||||||||| |||||| || | || Sbjct 35772 TGGCAACCCGTTTATGCTGTACAAGGACCACTGCAACCGCAAGAGCAACCAAAAGAATCT 35831 Query 364215 TGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACG 364273 ||||| |||| |||| |||||| || || |||||||| || ||| || || || | Sbjct 35832 GGGTACCATTC-GCAGCTCCAACCTGTGCACTGAGATTATCGAGTACTGTGCCCCTGATG 35890 Query 364274 AGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT----AAAAGATGGT 364329 || ||| || || ||||| || ||| | ||||| || ||||||| | || | Sbjct 35891 AGGTTGCTGTGTGCAACCTGGCCTCGCTGGCGCTGCCATCGTTTGTTGACTACAGCGAGA 35950 Query 364330 AC--TTTTGACCACCAGCATCTTTATGACGTAACCTA--TCATGCTACTTGCAATCTCGA 364385 || | ||| |||| | || | || || ||| | | || | | ||||||| | Sbjct 35951 ACCGCTACGACTTCCAGAAGCTGCACGATGTCACCAAGGTGGTGGTGC--GCAATCTGAA 36008 Query 364386 CAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCA 364445 | | || || ||| | || || | || || || | || ||||| || Sbjct 36009 CCGCATCATTGATGTCAATCACTACCCTGTGCCCGAGGCACACAACAGCAACATGCGCCA 36068 Query 364446 TCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAA--GATG 364503 || || ||||| ||||||| ||||| || ||||| | ||| || |||| | ||| Sbjct 36069 CCGTCCTATTGGCGTTGGTGTCCAGGGTCTGGCTGATGCCTTTTTG--GCTCTACGTATG 36126 Query 364504 GCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTT 364563 | ||||| ||| | || ||||| || || | |||||||||| || || || Sbjct 36127 CCGTTTGAGTCGGCCGAGGCTCGCAAGCTCAACACTCAGATCTTTGAGACTATTTACCAC 36186 Query 364564 GCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAG 364623 || || |||| || || || | || || |||| | |||||| || || ||| Sbjct 36187 GCTGCCCTGACGGCGTCCATGGAGATTGCCAAGGAGGAGGGCACGTACTCGACCTACGAG 36246 Query 364624 GGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTC 364683 || || ||| |||||||||| | | |||||||| | ||||||||||| || || | Sbjct 36247 GGTTCGCCTGTTTCGCAGGGCATCCTGCAGTTTGACATGTGGAATGTCACTCCCAGTGAC 36306 Query 364684 CGATGGAACTGGGATACGCT-ACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCT 364742 | ||| |||||| | |||| | | | | | ||| |||| ||| |||||||| || Sbjct 36307 CTCTGGGACTGGGCTTCGCTCAAGGAGC-AGATCAAGCAGCACGGTGTGCGCAACTCGCT 36365 Query 364743 CGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTT 364802 | || |||||||| ||||| || | ||||| || || ||||| |||||||| Sbjct 36366 GCTGCTGGCTCCCATGCCTACGGCCAGCACGTCGCAGATTCTGGGCAACAATGAGTGCTT 36425 Query 364803 CGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGT 364862 || |||| || ||| |||| || || || ||| |||| || || | ||| || Sbjct 36426 TGAGCCGTACACTTCCAACATTTACCAGCGTCGTGTGCTTGCCGGTGAGTTCCAGGTTGT 36485 Query 364863 TAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAA 364922 || || || | || || |||| || |||||| ||| | ||||||||| Sbjct 36486 GAACCCGTGGCTGCTGCGTGACCTGGTTGACCTGGGTCTGTGGTCTGATAACATGAAGAA 36545 Query 364923 CTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAA 364982 | || || |||| || |||||| | ||||||||||| | |||| || || | || Sbjct 36546 CCGCATTATTGCCGAGAACGGTTCTATTCAGAACATTCCCAGCATTCCCGACGACATCAA 36605 Query 364983 GCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGA 365042 | || | ||||| || || ||||| ||||| ||| || | | | ||||| ||||| Sbjct 36606 GGCTCTGTACAAGACAGTGTGGGAGATTTCGCAGCGCACGGTGGTGCAGATGGCTGCCGA 36665 Query 365043 TCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTC 365102 || ||||| |||||| ||| |||||| | ||| | ||||| | || ||| Sbjct 36666 CCGTGGTGCCTTTATCGACCAGTCGCAGTCGCTCAACATTCACATGAAGGACCCTACCAT 36725 Query 365103 CGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 | |||| |||| |||||| || ||| ||||| ||||| ||||| || Sbjct 36726 GGGCAAGATTACCAGCATGCACTTTGCCGGCTGGAAGCTGGGTCTCAAGACGGG 36779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303314941310330