Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq1092 178 1e-39
seq2283 114 1e-20
seq1473 113 4e-20
seq335 113 4e-20
>seq1092
Length=189081
Score = 178 bits (196), Expect = 1e-39
Identities = 371/541 (69%), Gaps = 19/541 (4%)
Strand=Plus/Minus
Query 46063 CTGCTTAATGCGTTTGAACGTATGCCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAG 46122
||| |||| || |||| ||| || ||| | ||| || |||||||||| | |||
Sbjct 137481 CTGTTTAACGCCATTGATACTATTCCCTGCATCCGCCGCAAGGCCGACTGGGCCCTCAAG 137422
Query 46123 TGGATCAACAGCAGCACCGCGACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAG 46182
||||| | | | |||| || ||| | ||| ||||||||||||| || ||
Sbjct 137421 TGGATTGCCGACCACGAGTCGACCTTTGCCCAACGTCTGGTGGCCTTTGCCGCCGTCGAA 137362
Query 46183 GGCGTCtttttttCTGGCAGTTTTGCCGCCATCTTTTACAT-CAAAACCAAGGGCATCAT 46241
||| |||| || || ||| ||||| ||||||||| | | || | || | ||||
Sbjct 137361 GGCATCTTCTTCTCGGGCGCCTTTGCTTCCATCTTTTGGCTGCGCAAGCGCGGTC-TCAT 137303
Query 46242 GCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTT 46301
|||||||||||| ||| |||||||||||| || ||||||||||||||||| || |||||
Sbjct 137302 GCCCGGCCTGACCTTTTCCAACGAGCTGATTTCCCGCGACGAGGGCCTGCACACAGACTT 137243
Query 46302 TGCGTGTCTCTACTATAACACTCGCGTGCACGACAAGCTTGCGCC--CGACACCGTG-CT 46358
||| || || || ||||| | | |||| | || || | | | || |
Sbjct 137242 TGCCTGCCTGCTCT-----TCTCGC-ACCTCAACAACC--GCCCCAGCAAGAAGCTGATT 137191
Query 46359 GAG--CATGTTCAAGGAGGCGGTGGCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCC 46416
||| || ||| || || || |||||||| |||||||| || || | ||| ||||||
Sbjct 137190 GAGGAAATCATCACCGACGCTGTCGCCATTGAAAAGGAGTTCTTGACCGACGCCCTGCCC 137131
Query 46417 GCTGCCCTGCTGGGCATGAACGCACAGTCAATGTGCGACTACATCGAGTTTGTAGCGGAC 46476
|| ||||| ||||||||||| | ||| | ||||| |||||||| || |||
Sbjct 137130 TGCGCTCTGCTCGGCATGAACGCCGACCTGATGAAGCAGTACATTGAGTTTGTTGCCGAC 137071
Query 46477 CGACTGCTCGTGCAGCTTCACCAGCCGAAGCATTTTCACGCGC--GCAATCCATTTGAGT 46534
|| ||||| || | | || || |||| | | ||| | ||| || ||||| |
Sbjct 137070 CGTCTGCTGGT-CGCCCTCGGCA-ACGAAAAGGTCTACCGCTCCACCAACCCCTTTGACT 137013
Query 46535 TTATGAACAACATCTCCCTGGAGGGCAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGT 46594
| ||| | |||||||| || | ||||| || || || ||||| ||||| |||||||| |
Sbjct 137012 TCATGGAGAACATCTCGCTCGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGCGACT 136953
Query 46595 A 46595
|
Sbjct 136952 A 136952
>seq2283
Length=86879
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||| || |||| |||||| || | || | ||| |||||||| || |||||||| |||
Sbjct 41339 GCCGCCACGCAGACGCAGAACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 41280
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
|| ||| || ||||| |||||||| || ||| | || | |||||||||||||||||
Sbjct 41279 CAGGGTACGGCCATCCTCCAGCTGCTTACCCGCGAAAATCAGGCGCTGCTGGTCCGGAGG 41220
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| || || || || ||| ||| ||| | | || | ||||||| ||| || |
Sbjct 41219 AATGCCCTCCTTATCCTGGATCTTCGACTTCACATTGTCGATGGTATCGGAGGATTCCAC 41160
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | || || ||||| ||||| || ||||| || |||||
Sbjct 41159 CTCAAGAGTGATTGTCTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 41112
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097
|| |||||||| || |||||||| || || ||| || ||||| |||||||| ||
Sbjct 41080 GTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTGCTTACCC 41021
Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157
||| | || | ||||||||||||||| || || || || ||||| ||| || ||||
Sbjct 41020 GCGAAAATCAGACGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGACTTG 40961
Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217
| | || | ||||| | ||||||| |||| || | ||| || ||||| |||||
Sbjct 40960 ACGTTGTCAATGGTATCCGACGACTCGACTTCGAGAGTGATGGTCTTGCCGGTAAGAGTC 40901
Query 131218 TTTACGAAAATCTGCAT 131234
|| ||||| || |||||
Sbjct 40900 TTGACGAAGATTTGCAT 40884
Score = 98.7 bits (108), Expect = 9e-16
Identities = 134/187 (72%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097
|| |||||||| || |||||||| || || ||| || |||||| |||||||| ||
Sbjct 40852 GTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCGTCCTCCAGCTGCTTTCCA 40793
Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157
|| |||| | |||||||||||||||||| || || || || || ||| || ||||
Sbjct 40792 GCAAAGATCAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTATCCTGGATCTTGGACTTG 40733
Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217
| | || | ||||| | ||||||| |||| || | ||| || ||||| || ||
Sbjct 40732 ACGTTGTCAATGGTATCCGACGACTCGACTTCGAGAGTGATGGTCTTGCCGGTGAGGGTC 40673
Query 131218 TTTACGA 131224
|| ||||
Sbjct 40672 TTGACGA 40666
>seq1473
Length=183801
Score = 113 bits (124), Expect = 4e-20
Identities = 134/182 (74%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104
|||| ||||||||||| ||| || |||||| ||||| ||||||||||| || |||
Sbjct 105034 CCTTCTGAATGTTGTAGTCGGACAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGA 105093
Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164
| | ||||||||||||||| || || || || ||||| ||| || ||||| | |
Sbjct 105094 TCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGT 105153
Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
| | || || | |||||||| || | ||||| ||| ||||| || || || || ||||
Sbjct 105154 CGATCGTGTCCGAGGACTCGACCTCCAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 105213
Query 131225 AA 131226
||
Sbjct 105214 AA 105215
>seq335
Length=221524
Score = 113 bits (124), Expect = 4e-20
Identities = 139/190 (73%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104
|||| || |||||||| || || ||||| ||||| ||||||||||| ||| |||
Sbjct 117049 CCTTCTGGATGTTGTAGTCAGACAGAGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGA 117108
Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164
| | ||||||||||||||| || || || || ||||| || || ||||| | |
Sbjct 117109 TCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGT 117168
Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
| | ||| || | |||||| | |||| ||||| || ||||| || || || || ||||
Sbjct 117169 CGATAGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTCAGGGTCTTGACGA 117228
Query 131225 AAATCTGCAT 131234
||||||||||
Sbjct 117229 AAATCTGCAT 117238
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471999141129600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |