Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04- 03] 2,315 sequences; 28,117,660 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq1092 178 1e-39 seq2283 114 1e-20 seq1473 113 4e-20 seq335 113 4e-20 >seq1092 Length=189081 Score = 178 bits (196), Expect = 1e-39 Identities = 371/541 (69%), Gaps = 19/541 (4%) Strand=Plus/Minus Query 46063 CTGCTTAATGCGTTTGAACGTATGCCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAG 46122 ||| |||| || |||| ||| || ||| | ||| || |||||||||| | ||| Sbjct 137481 CTGTTTAACGCCATTGATACTATTCCCTGCATCCGCCGCAAGGCCGACTGGGCCCTCAAG 137422 Query 46123 TGGATCAACAGCAGCACCGCGACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAG 46182 ||||| | | | |||| || ||| | ||| ||||||||||||| || || Sbjct 137421 TGGATTGCCGACCACGAGTCGACCTTTGCCCAACGTCTGGTGGCCTTTGCCGCCGTCGAA 137362 Query 46183 GGCGTCtttttttCTGGCAGTTTTGCCGCCATCTTTTACAT-CAAAACCAAGGGCATCAT 46241 ||| |||| || || ||| ||||| ||||||||| | | || | || | |||| Sbjct 137361 GGCATCTTCTTCTCGGGCGCCTTTGCTTCCATCTTTTGGCTGCGCAAGCGCGGTC-TCAT 137303 Query 46242 GCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTT 46301 |||||||||||| ||| |||||||||||| || ||||||||||||||||| || ||||| Sbjct 137302 GCCCGGCCTGACCTTTTCCAACGAGCTGATTTCCCGCGACGAGGGCCTGCACACAGACTT 137243 Query 46302 TGCGTGTCTCTACTATAACACTCGCGTGCACGACAAGCTTGCGCC--CGACACCGTG-CT 46358 ||| || || || ||||| | | |||| | || || | | | || | Sbjct 137242 TGCCTGCCTGCTCT-----TCTCGC-ACCTCAACAACC--GCCCCAGCAAGAAGCTGATT 137191 Query 46359 GAG--CATGTTCAAGGAGGCGGTGGCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCC 46416 ||| || ||| || || || |||||||| |||||||| || || | ||| |||||| Sbjct 137190 GAGGAAATCATCACCGACGCTGTCGCCATTGAAAAGGAGTTCTTGACCGACGCCCTGCCC 137131 Query 46417 GCTGCCCTGCTGGGCATGAACGCACAGTCAATGTGCGACTACATCGAGTTTGTAGCGGAC 46476 || ||||| ||||||||||| | ||| | ||||| |||||||| || ||| Sbjct 137130 TGCGCTCTGCTCGGCATGAACGCCGACCTGATGAAGCAGTACATTGAGTTTGTTGCCGAC 137071 Query 46477 CGACTGCTCGTGCAGCTTCACCAGCCGAAGCATTTTCACGCGC--GCAATCCATTTGAGT 46534 || ||||| || | | || || |||| | | ||| | ||| || ||||| | Sbjct 137070 CGTCTGCTGGT-CGCCCTCGGCA-ACGAAAAGGTCTACCGCTCCACCAACCCCTTTGACT 137013 Query 46535 TTATGAACAACATCTCCCTGGAGGGCAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGT 46594 | ||| | |||||||| || | ||||| || || || ||||| ||||| |||||||| | Sbjct 137012 TCATGGAGAACATCTCGCTCGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGCGACT 136953 Query 46595 A 46595 | Sbjct 136952 A 136952 >seq2283 Length=86879 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || |||| |||||| || | || | ||| |||||||| || |||||||| ||| Sbjct 41339 GCCGCCACGCAGACGCAGAACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 41280 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||| || ||||| |||||||| || ||| | || | ||||||||||||||||| Sbjct 41279 CAGGGTACGGCCATCCTCCAGCTGCTTACCCGCGAAAATCAGGCGCTGCTGGTCCGGAGG 41220 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || || || ||| ||| ||| | | || | ||||||| ||| || | Sbjct 41219 AATGCCCTCCTTATCCTGGATCTTCGACTTCACATTGTCGATGGTATCGGAGGATTCCAC 41160 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || ||||| ||||| || ||||| || ||||| Sbjct 41159 CTCAAGAGTGATTGTCTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 41112 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || |||||||| || |||||||| || || ||| || ||||| |||||||| || Sbjct 41080 GTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTGCTTACCC 41021 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| | || | ||||||||||||||| || || || || ||||| ||| || |||| Sbjct 41020 GCGAAAATCAGACGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGACTTG 40961 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | ||||| | ||||||| |||| || | ||| || ||||| ||||| Sbjct 40960 ACGTTGTCAATGGTATCCGACGACTCGACTTCGAGAGTGATGGTCTTGCCGGTAAGAGTC 40901 Query 131218 TTTACGAAAATCTGCAT 131234 || ||||| || ||||| Sbjct 40900 TTGACGAAGATTTGCAT 40884 Score = 98.7 bits (108), Expect = 9e-16 Identities = 134/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || |||||||| || |||||||| || || ||| || |||||| |||||||| || Sbjct 40852 GTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCGTCCTCCAGCTGCTTTCCA 40793 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 || |||| | |||||||||||||||||| || || || || || ||| || |||| Sbjct 40792 GCAAAGATCAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTATCCTGGATCTTGGACTTG 40733 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | ||||| | ||||||| |||| || | ||| || ||||| || || Sbjct 40732 ACGTTGTCAATGGTATCCGACGACTCGACTTCGAGAGTGATGGTCTTGCCGGTGAGGGTC 40673 Query 131218 TTTACGA 131224 || |||| Sbjct 40672 TTGACGA 40666 >seq1473 Length=183801 Score = 113 bits (124), Expect = 4e-20 Identities = 134/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| ||||||||||| ||| || |||||| ||||| ||||||||||| || ||| Sbjct 105034 CCTTCTGAATGTTGTAGTCGGACAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGA 105093 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | ||||||||||||||| || || || || ||||| ||| || ||||| | | Sbjct 105094 TCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGT 105153 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || || | |||||||| || | ||||| ||| ||||| || || || || |||| Sbjct 105154 CGATCGTGTCCGAGGACTCGACCTCCAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 105213 Query 131225 AA 131226 || Sbjct 105214 AA 105215 >seq335 Length=221524 Score = 113 bits (124), Expect = 4e-20 Identities = 139/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| || || ||||| ||||| ||||||||||| ||| ||| Sbjct 117049 CCTTCTGGATGTTGTAGTCAGACAGAGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGA 117108 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | ||||||||||||||| || || || || ||||| || || ||||| | | Sbjct 117109 TCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGT 117168 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | ||| || | |||||| | |||| ||||| || ||||| || || || || |||| Sbjct 117169 CGATAGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTCAGGGTCTTGACGA 117228 Query 131225 AAATCTGCAT 131234 |||||||||| Sbjct 117229 AAATCTGCAT 117238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471999141129600