Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04- 03] 2,315 sequences; 28,117,660 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq2283 104 2e-17 seq335 89.7 4e-13 >seq2283 Length=86879 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | ||| |||| || || ||||||||||| || ||||||||||||| | Sbjct 41338 CCGCCACGCAGACGCAGAACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 41279 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | ||||||| || || ||||| |||| || ||||| |||||| ||| Sbjct 41278 AGGGTACGGCCATCCTCCAGCTGCTTACCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGA 41219 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | |||||| || || || | | |||||| | | | | || ||| || ||| Sbjct 41218 ATGCCCTCCTTATCCTGGATCTTCGACTTCACATTGTCGATGGTATCGGAGGATTCCACC 41159 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||||| || || ||||| || || ||||| || || ||||| Sbjct 41158 TCAAGAGTGATTGTCTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 41112 >seq335 Length=221524 Score = 89.7 bits (98), Expect = 4e-13 Identities = 144/206 (70%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 16736 AGCGTGGACT--CCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGTT 16793 |||||||||| |||| || ||||||||||| | || || | | ||||||| || | Sbjct 117037 AGCGTGGACTGACCTTCTGGATGTTGTAGTCAGACAGAGTGCGGCCATCCTCCAGCTGCT 117096 Query 16794 TGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGCT 16853 |||| || | || || ||||| |||||| || | |||||| ||||| ||| | Sbjct 117097 TGCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGG 117156 Query 16854 GCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTCA 16913 ||| || | | | | |||||| || ||| || | ||| || || || || |||| Sbjct 117157 ACTTGACATTGTCGATAGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTCA 117216 Query 16914 GCGTTTTGACAAAAATCTGCATTTTG 16939 | || ||||| ||||||||||| ||| Sbjct 117217 GGGTCTTGACGAAAATCTGCATCTTG 117242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405076570821850