Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04-
03] 2,315 sequences; 28,117,660 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq1790 131 1e-25
seq1972 86.0 4e-12
>seq1790
Length=4252
Score = 131 bits (144), Expect = 1e-25
Identities = 86/95 (91%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
||||||||||||||||||||||||||||||||| |||||||||| || ||||||||
Sbjct 4194 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATGGTAGATAGGGACAGTGGGAATCTCGT 4135
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
| |||| ||||||||||||||||||||||||||||
Sbjct 4134 TGATCCATTCATGCGCGTCACTAATTAGATGACGA 4100
>seq1972
Length=108299
Score = 86.0 bits (94), Expect = 4e-12
Identities = 191/287 (67%), Gaps = 0/287 (0%)
Strand=Plus/Plus
Query 6200 GTTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTAT 6259
||||||||| ||||| ||||| ||| | ||||| |||| || ||||| || |||||
Sbjct 48595 GTTCTACCGGTACAAGATGCCCCGCCTTCAAACCAAGATCGAAGGCAAGGGTAATGGTAT 48654
Query 6260 TAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCTA 6319
|| || ||| | |||||| || | | ||||| || | || | || || | | |
Sbjct 48655 CAAGACTGTCGTGGTCAACCTGTCGGCCGTCGCCCAGTCTCTGGCTCGTCCCGGTGCTCA 48714
Query 6320 CCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGA 6379
|| || || || || || | ||| ||||| || ||||| | |||| | | | ||
Sbjct 48715 CCTGATCAAGTACTTTGGTTTCGAGCTTGGAGCCCAGACCAACATTGACCCCCCGGATGA 48774
Query 6380 GCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCTT 6439
|||| ||| | ||||| ||||| | | |||||||||||| | |||| ||
Sbjct 48775 CCGCTGGATCATCAACGGTTCGCACGATACCAAGAAGCTGCAGGACCACGTCTACGGTTT 48834
Query 6440 TATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCG 6486
||| |||||| || || || | | ||| | ||||| || ||||
Sbjct 48835 CATTGTCAAGTTCGTTCTTTGCAAGAAGTGCAAGAACCCCGAAACCG 48881
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334937749778765
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |